RNA–Protein interactions for RNA: ENST00000588254.1

SSC5D-203, Transcript of scavenger receptor cysteine rich family member with 5 domains, humanhuman

TSL 2

Gene SSC5D, Length 3,085 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSC5D-203ENST00000588254 PPP1R15AO75807 674 aaPredicted RBP23.66■■□□□ 1.38
SSC5D-203ENST00000588254 ERICH6Q7L0X2 663 aa23.66■■□□□ 1.38
SSC5D-203ENST00000588254 CNGB1Q14028 1251 aaPredicted RBP23.64■■□□□ 1.37
SSC5D-203ENST00000588254 PRXQ9BXM0 1461 aa23.62■■□□□ 1.37
SSC5D-203ENST00000588254 ARHGAP35Q9NRY4 1499 aa23.6■■□□□ 1.37
SSC5D-203ENST00000588254 SETD5Q9C0A6 1442 aa23.59■■□□□ 1.37
SSC5D-203ENST00000588254 PHLDB1Q86UU1 1377 aa23.56■■□□□ 1.36
SSC5D-203ENST00000588254 TOP2BQ02880 1626 aa23.56■■□□□ 1.36
SSC5D-203ENST00000588254 SENP3-EIF4A1A0A087X0R7 540 aa23.54■■□□□ 1.36
SSC5D-203ENST00000588254 KIF27Q86VH2 1401 aa23.53■■□□□ 1.36
SSC5D-203ENST00000588254 CDK11AQ9UQ88 783 aaPredicted RBP23.5■■□□□ 1.35
SSC5D-203ENST00000588254 ERICH3Q5RHP9 1530 aa23.47■■□□□ 1.35
SSC5D-203ENST00000588254 CUX2O14529 1486 aa23.47■■□□□ 1.35
SSC5D-203ENST00000588254 TONSLQ96HA7 1378 aa23.47■■□□□ 1.35
SSC5D-203ENST00000588254 CCER2I3L3R5 266 aa23.44■■□□□ 1.34
SSC5D-203ENST00000588254 CUX1P39880 1505 aa23.42■■□□□ 1.34
SSC5D-203ENST00000588254 B4GALNT3Q6L9W6 998 aa23.41■■□□□ 1.34
SSC5D-203ENST00000588254 FAM9BQ8IZU0 186 aa23.41■■□□□ 1.34
SSC5D-203ENST00000588254 PEG3Q9GZU2 1588 aa23.41■■□□□ 1.34
SSC5D-203ENST00000588254 CCDC184Q52MB2 194 aa23.38■■□□□ 1.33
SSC5D-203ENST00000588254 NBR1Q14596 966 aa23.37■■□□□ 1.33
SSC5D-203ENST00000588254 LRRC9Q6ZRR7 1453 aa23.33■■□□□ 1.33
SSC5D-203ENST00000588254 CHIC2Q9UKJ5 165 aa23.32■■□□□ 1.32
SSC5D-203ENST00000588254 TIAM1Q13009 1591 aa23.31■■□□□ 1.32
SSC5D-203ENST00000588254 BIVM-ERCC5R4GMW8 1640 aa23.3■■□□□ 1.32
SSC5D-203ENST00000588254 FHOD3Q2V2M9 1422 aa23.28■■□□□ 1.32
SSC5D-203ENST00000588254 IGF1RP08069 1367 aa23.28■■□□□ 1.32
SSC5D-203ENST00000588254 CARMIL1Q5VZK9 1371 aa23.27■■□□□ 1.32
SSC5D-203ENST00000588254 POLR3GLQ9BT43 218 aa23.27■■□□□ 1.31
SSC5D-203ENST00000588254 RRP7BPQ9NSQ0 103 aa23.26■■□□□ 1.31
SSC5D-203ENST00000588254 ARID3CA6NKF2 412 aa23.24■■□□□ 1.31
SSC5D-203ENST00000588254 HSPA5P11021 654 aaKnown RBP23.23■■□□□ 1.31
SSC5D-203ENST00000588254 FOXD1Q16676 465 aa23.23■■□□□ 1.31
SSC5D-203ENST00000588254 DEKP35659 375 aaKnown RBP23.2■■□□□ 1.3
SSC5D-203ENST00000588254 WASHC2AQ641Q2 1341 aa23.2■■□□□ 1.3
SSC5D-203ENST00000588254 FANCIQ9NVI1 1328 aa23.2■■□□□ 1.3
SSC5D-203ENST00000588254 MRS2Q9HD23 443 aa23.19■■□□□ 1.3
SSC5D-203ENST00000588254 TIMELESSQ9UNS1 1208 aa23.16■■□□□ 1.3
SSC5D-203ENST00000588254 PPP4R2Q9NY27 417 aa23.15■■□□□ 1.3
SSC5D-203ENST00000588254 PAK3O75914 559 aaPredicted RBP23.14■■□□□ 1.29
SSC5D-203ENST00000588254 PCF11O94913 1555 aaKnown RBP23.13■■□□□ 1.29
SSC5D-203ENST00000588254 CCDC18Q5T9S5 1454 aa23.12■■□□□ 1.29
SSC5D-203ENST00000588254 C11orf95C9JLR9 678 aaPredicted RBP23.11■■□□□ 1.29
SSC5D-203ENST00000588254 MTUS2Q5JR59 1369 aa23.11■■□□□ 1.29
SSC5D-203ENST00000588254 PTPRKQ15262 1439 aa23.09■■□□□ 1.29
SSC5D-203ENST00000588254 FHAD1B1AJZ9 1412 aa23.08■■□□□ 1.29
SSC5D-203ENST00000588254 AQRO60306 1485 aaKnown RBP eCLIP23.08■■□□□ 1.28
SSC5D-203ENST00000588254 EIF4G2P78344 907 aaKnown RBP eCLIP23.06■■□□□ 1.28
SSC5D-203ENST00000588254 ZNF326Q5BKZ1 582 aaKnown RBP23.03■■□□□ 1.28
SSC5D-203ENST00000588254 NOP58Q9Y2X3 529 aaKnown RBP23.02■■□□□ 1.28
SSC5D-203ENST00000588254 FGD6Q6ZV73 1430 aa23.01■■□□□ 1.27
SSC5D-203ENST00000588254 NPM2Q86SE8 214 aaKnown RBP23.01■■□□□ 1.27
SSC5D-203ENST00000588254 FGD5Q6ZNL6 1462 aa23■■□□□ 1.27
SSC5D-203ENST00000588254 PRKRIP1Q9H875 184 aaPredicted RBP23■■□□□ 1.27
SSC5D-203ENST00000588254 L3MBTL2Q969R5 705 aa22.99■■□□□ 1.27
SSC5D-203ENST00000588254 CFTRP13569 1480 aa22.98■■□□□ 1.27
SSC5D-203ENST00000588254 UACAQ9BZF9 1416 aa22.96■■□□□ 1.27
SSC5D-203ENST00000588254 RTN4Q9NQC3 1192 aaKnown RBP22.95■■□□□ 1.27
SSC5D-203ENST00000588254 SALL2Q9Y467 1007 aaPredicted RBP22.95■■□□□ 1.27
SSC5D-203ENST00000588254 CCDC136Q96JN2 1154 aa22.95■■□□□ 1.26
SSC5D-203ENST00000588254 AKNAQ7Z591 1439 aa22.95■■□□□ 1.26
SSC5D-203ENST00000588254 RAD54L2Q9Y4B4 1467 aa22.93■■□□□ 1.26
SSC5D-203ENST00000588254 MAP3K1Q13233 1512 aa22.92■■□□□ 1.26
SSC5D-203ENST00000588254 NAIPQ13075 1403 aa22.91■■□□□ 1.26
SSC5D-203ENST00000588254 NCAPD3P42695 1498 aa22.88■■□□□ 1.25
SSC5D-203ENST00000588254 HFM1A2PYH4 1435 aa22.88■■□□□ 1.25
SSC5D-203ENST00000588254 NBPF8Q3BBV2 869 aa22.87■■□□□ 1.25
SSC5D-203ENST00000588254 CNTLNQ9NXG0 1405 aa22.86■■□□□ 1.25
SSC5D-203ENST00000588254 RTL5Q5HYW3 569 aaPredicted RBP22.85■■□□□ 1.25
SSC5D-203ENST00000588254 CFAP43Q8NDM7 1665 aa22.85■■□□□ 1.25
SSC5D-203ENST00000588254 ANP32AP39687 249 aaKnown RBP22.85■■□□□ 1.25
SSC5D-203ENST00000588254 MPHOSPH9Q99550 1183 aa22.85■■□□□ 1.25
SSC5D-203ENST00000588254 ZBED9Q6R2W3 1325 aa22.85■■□□□ 1.25
SSC5D-203ENST00000588254 PTPN23Q9H3S7 1636 aa22.84■■□□□ 1.25
SSC5D-203ENST00000588254 FMN1Q68DA7 1419 aa22.83■■□□□ 1.24
SSC5D-203ENST00000588254 CASKIN1Q8WXD9 1431 aa22.83■■□□□ 1.24
SSC5D-203ENST00000588254 CCDC7Q96M83 1385 aa22.83■■□□□ 1.24
SSC5D-203ENST00000588254 LAS1LQ9Y4W2 734 aaKnown RBP22.83■■□□□ 1.24
SSC5D-203ENST00000588254 ANO8Q9HCE9 1232 aaPredicted RBP22.82■■□□□ 1.24
SSC5D-203ENST00000588254 DNAJC5BQ9UF47 199 aa22.81■■□□□ 1.24
SSC5D-203ENST00000588254 FYCO1Q9BQS8 1478 aa22.81■■□□□ 1.24
SSC5D-203ENST00000588254 KIF7Q2M1P5 1343 aa22.81■■□□□ 1.24
SSC5D-203ENST00000588254 ZBTB47Q9UFB7 747 aaPredicted RBP22.8■■□□□ 1.24
SSC5D-203ENST00000588254 NCOA2Q15596 1464 aa22.8■■□□□ 1.24
SSC5D-203ENST00000588254 KDM5BQ9UGL1 1544 aa22.79■■□□□ 1.24
SSC5D-203ENST00000588254 ERICH6BQ5W0A0 696 aa22.77■■□□□ 1.24
SSC5D-203ENST00000588254 IL27Q8NEV9 243 aa22.76■■□□□ 1.23
SSC5D-203ENST00000588254 CADPSQ9ULU8 1353 aa22.76■■□□□ 1.23
SSC5D-203ENST00000588254 MYOM3Q5VTT5 1437 aa22.74■■□□□ 1.23
SSC5D-203ENST00000588254 HMGXB3Q12766 1538 aa22.74■■□□□ 1.23
SSC5D-203ENST00000588254 TDRD9Q8NDG6 1382 aaKnown RBP22.73■■□□□ 1.23
SSC5D-203ENST00000588254 SLC4A1APQ9BWU0 796 aaKnown RBP22.73■■□□□ 1.23
SSC5D-203ENST00000588254 SKAP1Q86WV1 359 aa22.73■■□□□ 1.23
SSC5D-203ENST00000588254 IPO9Q96P70 1041 aaKnown RBP22.73■■□□□ 1.23
SSC5D-203ENST00000588254 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.7■■□□□ 1.22
SSC5D-203ENST00000588254 NUDCQ9Y266 331 aa22.69■■□□□ 1.22
SSC5D-203ENST00000588254 KDM6BO15054 1643 aa22.69■■□□□ 1.22
SSC5D-203ENST00000588254 MYT1LQ9UL68 1186 aa22.68■■□□□ 1.22
SSC5D-203ENST00000588254 PRKCSHP14314 528 aaPredicted RBP22.68■■□□□ 1.22
SSC5D-203ENST00000588254 TMC1Q8TDI8 760 aa22.68■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms