RNA–Protein interactions for RNA: ENST00000588164.2

LAMA3-209, Transcript of laminin subunit alpha 3, humanhuman

TSL 5

Gene LAMA3, Length 771 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA3-209ENST00000588164 CEP170Q5SW79 1584 aa12.86□□□□□ -0.35
LAMA3-209ENST00000588164 KDM6BO15054 1643 aa12.84□□□□□ -0.35
LAMA3-209ENST00000588164 CSRNP3Q8WYN3 585 aa12.83□□□□□ -0.36
LAMA3-209ENST00000588164 ABCA5Q8WWZ7 1642 aa12.83□□□□□ -0.36
LAMA3-209ENST00000588164 ABCC10Q5T3U5 1492 aa12.83□□□□□ -0.36
LAMA3-209ENST00000588164 MAPKBP1O60336 1514 aa12.82□□□□□ -0.36
LAMA3-209ENST00000588164 DIP2BQ9P265 1576 aa12.81□□□□□ -0.36
LAMA3-209ENST00000588164 NUP160Q12769 1436 aa12.8□□□□□ -0.36
LAMA3-209ENST00000588164 GRIN2AQ12879 1464 aa12.8□□□□□ -0.36
LAMA3-209ENST00000588164 CUX1P39880 1505 aa12.78□□□□□ -0.36
LAMA3-209ENST00000588164 ADAMTS12P58397 1594 aa12.77□□□□□ -0.37
LAMA3-209ENST00000588164 ABCA10Q8WWZ4 1543 aa12.76□□□□□ -0.37
LAMA3-209ENST00000588164 HECW2Q9P2P5 1572 aa12.75□□□□□ -0.37
LAMA3-209ENST00000588164 FAM69CQ0P6D2 419 aa12.73□□□□□ -0.37
LAMA3-209ENST00000588164 TSPOAP1O95153 1857 aa12.72□□□□□ -0.37
LAMA3-209ENST00000588164 ADGRL1O94910 1474 aa12.7□□□□□ -0.38
LAMA3-209ENST00000588164 ADCY10Q96PN6 1610 aa12.67□□□□□ -0.38
LAMA3-209ENST00000588164 FHAD1B1AJZ9 1412 aa12.65□□□□□ -0.38
LAMA3-209ENST00000588164 PRG4Q92954 1404 aaPredicted RBP12.65□□□□□ -0.38
LAMA3-209ENST00000588164 NPM1P06748 294 aaKnown RBP eCLIP12.64□□□□□ -0.39
LAMA3-209ENST00000588164 FBXO41Q8TF61 875 aa12.64□□□□□ -0.39
LAMA3-209ENST00000588164 CACNB1Q02641 598 aaPredicted RBP12.63□□□□□ -0.39
LAMA3-209ENST00000588164 ERICH3Q5RHP9 1530 aa12.62□□□□□ -0.39
LAMA3-209ENST00000588164 RUSC2Q8N2Y8 1516 aa12.61□□□□□ -0.39
LAMA3-209ENST00000588164 PPRC1Q5VV67 1664 aaKnown RBP12.61□□□□□ -0.39
LAMA3-209ENST00000588164 RTN4Q9NQC3 1192 aaKnown RBP12.6□□□□□ -0.39
LAMA3-209ENST00000588164 AMER1Q5JTC6 1135 aaPredicted RBP12.58□□□□□ -0.4
LAMA3-209ENST00000588164 GLI2P10070 1586 aa12.57□□□□□ -0.4
LAMA3-209ENST00000588164 JPH4Q96JJ6 628 aa12.56□□□□□ -0.4
LAMA3-209ENST00000588164 TOP2BQ02880 1626 aa12.55□□□□□ -0.4
LAMA3-209ENST00000588164 WRNQ14191 1432 aaPredicted RBP eCLIP12.54□□□□□ -0.4
LAMA3-209ENST00000588164 BIVM-ERCC5R4GMW8 1640 aa12.51□□□□□ -0.41
LAMA3-209ENST00000588164 SLC4A1APQ9BWU0 796 aaKnown RBP12.51□□□□□ -0.41
LAMA3-209ENST00000588164 LMTK3Q96Q04 1460 aa12.5□□□□□ -0.41
LAMA3-209ENST00000588164 MAP3K4Q9Y6R4 1608 aa12.48□□□□□ -0.41
LAMA3-209ENST00000588164 PLB1Q6P1J6 1458 aa12.48□□□□□ -0.41
LAMA3-209ENST00000588164 TEX14Q8IWB6 1497 aa12.46□□□□□ -0.41
LAMA3-209ENST00000588164 ABCC2Q92887 1545 aa12.46□□□□□ -0.42
LAMA3-209ENST00000588164 COL17A1Q9UMD9 1497 aaPredicted RBP12.46□□□□□ -0.42
LAMA3-209ENST00000588164 CUL7Q14999 1698 aa12.43□□□□□ -0.42
LAMA3-209ENST00000588164 ASXL2Q76L83 1435 aa12.43□□□□□ -0.42
LAMA3-209ENST00000588164 KIAA0586Q9BVV6 1533 aa12.42□□□□□ -0.42
LAMA3-209ENST00000588164 UHRF1BP1LA0JNW5 1464 aa12.4□□□□□ -0.43
LAMA3-209ENST00000588164 EPRSP07814 1512 aaKnown RBP12.38□□□□□ -0.43
LAMA3-209ENST00000588164 SOCS7O14512 581 aa12.38□□□□□ -0.43
LAMA3-209ENST00000588164 PTPRGP23470 1445 aa12.37□□□□□ -0.43
LAMA3-209ENST00000588164 KIF21BO75037 1637 aa12.34□□□□□ -0.43
LAMA3-209ENST00000588164 TNIKQ9UKE5 1360 aa12.33□□□□□ -0.44
LAMA3-209ENST00000588164 KDM5BQ9UGL1 1544 aa12.32□□□□□ -0.44
LAMA3-209ENST00000588164 PCF11O94913 1555 aaKnown RBP12.32□□□□□ -0.44
LAMA3-209ENST00000588164 ADAMTSL3P82987 1691 aa12.32□□□□□ -0.44
LAMA3-209ENST00000588164 CARMIL2Q6F5E8 1435 aa12.31□□□□□ -0.44
LAMA3-209ENST00000588164 CFAP43Q8NDM7 1665 aa12.31□□□□□ -0.44
LAMA3-209ENST00000588164 ZCCHC11Q5TAX3 1644 aaKnown RBP12.3□□□□□ -0.44
LAMA3-209ENST00000588164 UACAQ9BZF9 1416 aa12.29□□□□□ -0.44
LAMA3-209ENST00000588164 PTPRMP28827 1452 aa12.29□□□□□ -0.44
LAMA3-209ENST00000588164 MAGI3Q5TCQ9 1506 aa12.29□□□□□ -0.44
LAMA3-209ENST00000588164 ILDR2Q71H61 639 aa12.26□□□□□ -0.45
LAMA3-209ENST00000588164 DISP3Q9P2K9 1392 aa12.25□□□□□ -0.45
LAMA3-209ENST00000588164 IQGAP2Q13576 1575 aa12.24□□□□□ -0.45
LAMA3-209ENST00000588164 WDR7Q9Y4E6 1490 aa12.24□□□□□ -0.45
LAMA3-209ENST00000588164 SPATA31D1Q6ZQQ2 1576 aa12.23□□□□□ -0.45
LAMA3-209ENST00000588164 BCORL1Q5H9F3 1711 aa12.23□□□□□ -0.45
LAMA3-209ENST00000588164 ARAP3Q8WWN8 1544 aa12.21□□□□□ -0.45
LAMA3-209ENST00000588164 MAPK8IP2Q13387 824 aaPredicted RBP12.21□□□□□ -0.45
LAMA3-209ENST00000588164 DISP1Q96F81 1524 aa12.19□□□□□ -0.46
LAMA3-209ENST00000588164 CD109Q6YHK3 1445 aa12.19□□□□□ -0.46
LAMA3-209ENST00000588164 MADDQ8WXG6 1647 aa12.19□□□□□ -0.46
LAMA3-209ENST00000588164 IGF1RP08069 1367 aa12.18□□□□□ -0.46
LAMA3-209ENST00000588164 CERKQ8TCT0 537 aa12.18□□□□□ -0.46
LAMA3-209ENST00000588164 DMRT2Q9Y5R5 561 aa12.16□□□□□ -0.46
LAMA3-209ENST00000588164 KIF27Q86VH2 1401 aa12.15□□□□□ -0.46
LAMA3-209ENST00000588164 UGGT2Q9NYU1 1516 aa12.15□□□□□ -0.46
LAMA3-209ENST00000588164 KIAA0556O60303 1618 aa12.15□□□□□ -0.47
LAMA3-209ENST00000588164 TTBK1Q5TCY1 1321 aaPredicted RBP12.14□□□□□ -0.47
LAMA3-209ENST00000588164 RIMS1Q86UR5 1692 aaKnown RBP12.13□□□□□ -0.47
LAMA3-209ENST00000588164 PHLDB1Q86UU1 1377 aa12.13□□□□□ -0.47
LAMA3-209ENST00000588164 CARMIL1Q5VZK9 1371 aa12.09□□□□□ -0.47
LAMA3-209ENST00000588164 ARHGEF40Q8TER5 1519 aa12.07□□□□□ -0.48
LAMA3-209ENST00000588164 ABCA8O94911 1581 aa12.07□□□□□ -0.48
LAMA3-209ENST00000588164 NCBP3Q53F19 620 aaKnown RBP12.07□□□□□ -0.48
LAMA3-209ENST00000588164 ABCA9Q8IUA7 1624 aa12.07□□□□□ -0.48
LAMA3-209ENST00000588164 FRMPD1Q5SYB0 1578 aa12.06□□□□□ -0.48
LAMA3-209ENST00000588164 NEO1Q92859 1461 aa12.05□□□□□ -0.48
LAMA3-209ENST00000588164 PREX1Q8TCU6 1659 aa12.04□□□□□ -0.48
LAMA3-209ENST00000588164 TTC37Q6PGP7 1564 aa12.03□□□□□ -0.48
LAMA3-209ENST00000588164 HSPA2P54652 639 aa12.02□□□□□ -0.49
LAMA3-209ENST00000588164 FER1L4A9Z1Z3 1794 aa12.02□□□□□ -0.49
LAMA3-209ENST00000588164 STRCQ7RTU9 1775 aa12.02□□□□□ -0.49
LAMA3-209ENST00000588164 IQSEC2Q5JU85 1478 aa12.02□□□□□ -0.49
LAMA3-209ENST00000588164 CTTNBP2Q8WZ74 1663 aa12□□□□□ -0.49
LAMA3-209ENST00000588164 RICTORQ6R327 1708 aa12□□□□□ -0.49
LAMA3-209ENST00000588164 POGZQ7Z3K3 1410 aa12□□□□□ -0.49
LAMA3-209ENST00000588164 FANCAO15360 1455 aa12□□□□□ -0.49
LAMA3-209ENST00000588164 KCNH8Q96L42 1107 aa11.99□□□□□ -0.49
LAMA3-209ENST00000588164 GOLGA3Q08378 1498 aa11.99□□□□□ -0.49
LAMA3-209ENST00000588164 YEATS2Q9ULM3 1422 aa11.98□□□□□ -0.49
LAMA3-209ENST00000588164 ARID4BQ4LE39 1312 aaPredicted RBP11.98□□□□□ -0.49
LAMA3-209ENST00000588164 ZBTB22O15209 634 aa11.96□□□□□ -0.49
LAMA3-209ENST00000588164 ZMYM4Q5VZL5 1548 aa11.96□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms