RNA–Protein interactions for RNA: ENST00000588030.5

CIRBP-215, Transcript of cold inducible RNA binding protein, human

APPRIS P3 TSL 5 BASIC

Gene CIRBP, Length 1,509 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CIRBP-215	ENST00000588030	PRG4	Q92954	1404 aa	Predicted RBP	33.55	■■■□□ 2.96
CIRBP-215	ENST00000588030	RUSC2	Q8N2Y8	1516 aa		33.52	■■■□□ 2.96
CIRBP-215	ENST00000588030	TRH	P20396	242 aa	Predicted RBP	33.5	■■■□□ 2.95
CIRBP-215	ENST00000588030	KIAA0586	Q9BVV6	1533 aa		33.49	■■■□□ 2.95
CIRBP-215	ENST00000588030	RAPGEF2	Q9Y4G8	1499 aa		33.32	■■■□□ 2.92
CIRBP-215	ENST00000588030	CHIC1	Q5VXU3	224 aa		33.26	■■■□□ 2.91
CIRBP-215	ENST00000588030	IQGAP2	Q13576	1575 aa		33.16	■■■□□ 2.9
CIRBP-215	ENST00000588030	PRX	Q9BXM0	1461 aa		33.14	■■■□□ 2.9
CIRBP-215	ENST00000588030	PTPRG	P23470	1445 aa		33.12	■■■□□ 2.89
CIRBP-215	ENST00000588030	CARMIL2	Q6F5E8	1435 aa		33.12	■■■□□ 2.89
CIRBP-215	ENST00000588030	FAM9A	Q8IZU1	332 aa	Predicted RBP	33.11	■■■□□ 2.89
CIRBP-215	ENST00000588030	CSRNP3	Q8WYN3	585 aa		33.09	■■■□□ 2.89
CIRBP-215	ENST00000588030	TNIK	Q9UKE5	1360 aa		33.09	■■■□□ 2.89
CIRBP-215	ENST00000588030	TTBK1	Q5TCY1	1321 aa	Predicted RBP	33.08	■■■□□ 2.89
CIRBP-215	ENST00000588030	NPM1	P06748	294 aa	Known RBP eCLIP	33.07	■■■□□ 2.89
CIRBP-215	ENST00000588030	DISP1	Q96F81	1524 aa		33.05	■■■□□ 2.88
CIRBP-215	ENST00000588030	UGGT2	Q9NYU1	1516 aa		33.03	■■■□□ 2.88
CIRBP-215	ENST00000588030	ADCY10	Q96PN6	1610 aa		33.02	■■■□□ 2.88
CIRBP-215	ENST00000588030	EEA1	Q15075	1411 aa		33	■■■□□ 2.87
CIRBP-215	ENST00000588030	MAPKBP1	O60336	1514 aa		32.87	■■■□□ 2.85
CIRBP-215	ENST00000588030	FAM69C	Q0P6D2	419 aa		32.87	■■■□□ 2.85
CIRBP-215	ENST00000588030	CTTNBP2	Q8WZ74	1663 aa		32.86	■■■□□ 2.85
CIRBP-215	ENST00000588030	UACA	Q9BZF9	1416 aa		32.86	■■■□□ 2.85
CIRBP-215	ENST00000588030	KIAA0556	O60303	1618 aa		32.86	■■■□□ 2.85
CIRBP-215	ENST00000588030	ABCC10	Q5T3U5	1492 aa		32.84	■■■□□ 2.85
CIRBP-215	ENST00000588030	UHRF1BP1L	A0JNW5	1464 aa		32.83	■■■□□ 2.85
CIRBP-215	ENST00000588030	ABCC2	Q92887	1545 aa		32.81	■■■□□ 2.84
CIRBP-215	ENST00000588030	KIF13A	Q9H1H9	1805 aa		32.8	■■■□□ 2.84
CIRBP-215	ENST00000588030	GOLGA3	Q08378	1498 aa		32.79	■■■□□ 2.84
CIRBP-215	ENST00000588030	EHMT2	Q96KQ7	1210 aa		32.77	■■■□□ 2.84
CIRBP-215	ENST00000588030	DIP2B	Q9P265	1576 aa		32.7	■■■□□ 2.83
CIRBP-215	ENST00000588030	P3H3	Q8IVL6	736 aa		32.69	■■■□□ 2.82
CIRBP-215	ENST00000588030	ASXL2	Q76L83	1435 aa		32.68	■■■□□ 2.82
CIRBP-215	ENST00000588030	KIF21B	O75037	1637 aa		32.67	■■■□□ 2.82
CIRBP-215	ENST00000588030	KDM5B	Q9UGL1	1544 aa		32.67	■■■□□ 2.82
CIRBP-215	ENST00000588030	PLB1	Q6P1J6	1458 aa		32.67	■■■□□ 2.82
CIRBP-215	ENST00000588030	RANGAP1	P46060	587 aa	Predicted RBP	32.63	■■■□□ 2.81
CIRBP-215	ENST00000588030	ABCA8	O94911	1581 aa		32.58	■■■□□ 2.81
CIRBP-215	ENST00000588030	UBTF	P17480	764 aa	Known RBP	32.56	■■■□□ 2.8
CIRBP-215	ENST00000588030	ZCCHC11	Q5TAX3	1644 aa	Known RBP	32.53	■■■□□ 2.8
CIRBP-215	ENST00000588030	SAMD9	Q5K651	1589 aa		32.51	■■■□□ 2.8
CIRBP-215	ENST00000588030	EPRS	P07814	1512 aa	Known RBP	32.48	■■■□□ 2.79
CIRBP-215	ENST00000588030	GLI2	P10070	1586 aa		32.47	■■■□□ 2.79
CIRBP-215	ENST00000588030	TSPOAP1	O95153	1857 aa		32.43	■■■□□ 2.78
CIRBP-215	ENST00000588030	ARID3C	A6NKF2	412 aa		32.41	■■■□□ 2.78
CIRBP-215	ENST00000588030	WDR7	Q9Y4E6	1490 aa		32.41	■■■□□ 2.78
CIRBP-215	ENST00000588030	FHOD3	Q2V2M9	1422 aa		32.39	■■■□□ 2.78
CIRBP-215	ENST00000588030	ATP10B	O94823	1461 aa		32.38	■■■□□ 2.77
CIRBP-215	ENST00000588030	KCNH8	Q96L42	1107 aa		32.37	■■■□□ 2.77
CIRBP-215	ENST00000588030	PPRC1	Q5VV67	1664 aa	Known RBP	32.3	■■■□□ 2.76
CIRBP-215	ENST00000588030	EFCAB5	A4FU69	1503 aa		32.28	■■■□□ 2.76
CIRBP-215	ENST00000588030	RAPGEF6	Q8TEU7	1601 aa		32.27	■■■□□ 2.76
CIRBP-215	ENST00000588030	MAP3K4	Q9Y6R4	1608 aa		32.27	■■■□□ 2.76
CIRBP-215	ENST00000588030	KDM6B	O15054	1643 aa		32.26	■■■□□ 2.76
CIRBP-215	ENST00000588030	NUP153	P49790	1475 aa	Known RBP	32.23	■■■□□ 2.75
CIRBP-215	ENST00000588030	HNRNPUL2-BSCL2	H3BQZ7	746 aa	Predicted RBP	32.22	■■■□□ 2.75
CIRBP-215	ENST00000588030	HNRNPUL2	Q1KMD3	747 aa	Known RBP	32.22	■■■□□ 2.75
CIRBP-215	ENST00000588030	CD109	Q6YHK3	1445 aa		32.2	■■■□□ 2.75
CIRBP-215	ENST00000588030	COL17A1	Q9UMD9	1497 aa	Predicted RBP	32.18	■■■□□ 2.74
CIRBP-215	ENST00000588030	TEX14	Q8IWB6	1497 aa		32.17	■■■□□ 2.74
CIRBP-215	ENST00000588030	ARHGAP35	Q9NRY4	1499 aa		32.16	■■■□□ 2.74
CIRBP-215	ENST00000588030	MAGI3	Q5TCQ9	1506 aa		32.13	■■■□□ 2.73
CIRBP-215	ENST00000588030	PLEKHD1	A6NEE1	506 aa		32.09	■■■□□ 2.73
CIRBP-215	ENST00000588030	CFAP43	Q8NDM7	1665 aa		32.09	■■■□□ 2.73
CIRBP-215	ENST00000588030	AEBP2	Q6ZN18	517 aa	Predicted RBP	32.07	■■■□□ 2.72
CIRBP-215	ENST00000588030	FMN1	Q68DA7	1419 aa		32.05	■■■□□ 2.72
CIRBP-215	ENST00000588030	ATP1B4	Q9UN42	357 aa	Predicted RBP	32.02	■■■□□ 2.72
CIRBP-215	ENST00000588030	ABCA9	Q8IUA7	1624 aa		31.99	■■■□□ 2.71
CIRBP-215	ENST00000588030	LOC105371045	A0A1W2PR82	267 aa		31.99	■■■□□ 2.71
CIRBP-215	ENST00000588030	CLIP1	P30622	1438 aa		31.97	■■■□□ 2.71
CIRBP-215	ENST00000588030	CDK13	Q14004	1512 aa	Known RBP	31.95	■■■□□ 2.71
CIRBP-215	ENST00000588030	KDM4F	A0A1W2PPD8	638 aa		31.9	■■■□□ 2.7
CIRBP-215	ENST00000588030	PHLDB1	Q86UU1	1377 aa		31.88	■■■□□ 2.69
CIRBP-215	ENST00000588030	ARAP3	Q8WWN8	1544 aa		31.86	■■■□□ 2.69
CIRBP-215	ENST00000588030	HECW1	Q76N89	1606 aa		31.85	■■■□□ 2.69
CIRBP-215	ENST00000588030	CEP162	Q5TB80	1403 aa		31.83	■■■□□ 2.69
CIRBP-215	ENST00000588030	CDK11A	Q9UQ88	783 aa	Predicted RBP	31.83	■■■□□ 2.69
CIRBP-215	ENST00000588030	GEMIN5	Q8TEQ6	1508 aa	Known RBP eCLIP	31.83	■■■□□ 2.69
CIRBP-215	ENST00000588030	NEO1	Q92859	1461 aa		31.81	■■■□□ 2.68
CIRBP-215	ENST00000588030	RAPGEF3	O95398	923 aa		31.79	■■■□□ 2.68
CIRBP-215	ENST00000588030	CASKIN1	Q8WXD9	1431 aa		31.79	■■■□□ 2.68
CIRBP-215	ENST00000588030	PCF11	O94913	1555 aa	Known RBP	31.76	■■■□□ 2.68
CIRBP-215	ENST00000588030	TTC37	Q6PGP7	1564 aa		31.73	■■■□□ 2.67
CIRBP-215	ENST00000588030	TRO	Q12816	1431 aa	Predicted RBP	31.7	■■■□□ 2.67
CIRBP-215	ENST00000588030	AKNA	Q7Z591	1439 aa		31.7	■■■□□ 2.67
CIRBP-215	ENST00000588030	FANCA	O15360	1455 aa		31.69	■■■□□ 2.66
CIRBP-215	ENST00000588030	LRRIQ1	Q96JM4	1722 aa		31.69	■■■□□ 2.66
CIRBP-215	ENST00000588030	PLCH2	O75038	1416 aa		31.68	■■■□□ 2.66
CIRBP-215	ENST00000588030	FYCO1	Q9BQS8	1478 aa		31.65	■■■□□ 2.66
CIRBP-215	ENST00000588030	ADGRL1	O94910	1474 aa		31.65	■■■□□ 2.66
CIRBP-215	ENST00000588030	CCDC18	Q5T9S5	1454 aa		31.62	■■■□□ 2.65
CIRBP-215	ENST00000588030	DENND4B	O75064	1496 aa	Predicted RBP	31.61	■■■□□ 2.65
CIRBP-215	ENST00000588030	KIF14	Q15058	1648 aa		31.61	■■■□□ 2.65
CIRBP-215	ENST00000588030	EFCAB2	Q5VUJ9	269 aa		31.59	■■■□□ 2.65
CIRBP-215	ENST00000588030	FRMPD1	Q5SYB0	1578 aa		31.58	■■■□□ 2.65
CIRBP-215	ENST00000588030	CFAP74	Q9C0B2	1584 aa		31.55	■■■□□ 2.64
CIRBP-215	ENST00000588030	SCAPER	Q9BY12	1400 aa		31.53	■■■□□ 2.64
CIRBP-215	ENST00000588030	RICTOR	Q6R327	1708 aa		31.48	■■■□□ 2.63
CIRBP-215	ENST00000588030	MYO5C	Q9NQX4	1742 aa		31.48	■■■□□ 2.63
CIRBP-215	ENST00000588030	ARHGAP5	Q13017	1502 aa		31.43	■■■□□ 2.62

Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms