RNA–Protein interactions for RNA: ENST00000587818.1

TRAPPC6A-203, Transcript of trafficking protein particle complex 6A, humanhuman

TSL 2

Gene TRAPPC6A, Length 433 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC6A-203ENST00000587818 CUL7Q14999 1698 aa34.26■■■■□ 3.08
TRAPPC6A-203ENST00000587818 PRG4Q92954 1404 aaPredicted RBP34.26■■■■□ 3.07
TRAPPC6A-203ENST00000587818 RUSC2Q8N2Y8 1516 aa34.25■■■■□ 3.07
TRAPPC6A-203ENST00000587818 KIAA0586Q9BVV6 1533 aa34.14■■■■□ 3.06
TRAPPC6A-203ENST00000587818 RAPGEF2Q9Y4G8 1499 aa33.97■■■■□ 3.03
TRAPPC6A-203ENST00000587818 TTBK1Q5TCY1 1321 aaPredicted RBP33.95■■■■□ 3.03
TRAPPC6A-203ENST00000587818 IQGAP2Q13576 1575 aa33.85■■■■□ 3.01
TRAPPC6A-203ENST00000587818 NPM1P06748 294 aaKnown RBP eCLIP33.81■■■■□ 3
TRAPPC6A-203ENST00000587818 PTPRGP23470 1445 aa33.8■■■■□ 3
TRAPPC6A-203ENST00000587818 CARMIL2Q6F5E8 1435 aa33.79■■■■□ 3
TRAPPC6A-203ENST00000587818 TNIKQ9UKE5 1360 aa33.74■■■□□ 2.99
TRAPPC6A-203ENST00000587818 CSRNP3Q8WYN3 585 aa33.74■■■□□ 2.99
TRAPPC6A-203ENST00000587818 ADCY10Q96PN6 1610 aa33.73■■■□□ 2.99
TRAPPC6A-203ENST00000587818 PRXQ9BXM0 1461 aa33.73■■■□□ 2.99
TRAPPC6A-203ENST00000587818 DISP1Q96F81 1524 aa33.7■■■□□ 2.99
TRAPPC6A-203ENST00000587818 FAM9AQ8IZU1 332 aaPredicted RBP33.7■■■□□ 2.99
TRAPPC6A-203ENST00000587818 UGGT2Q9NYU1 1516 aa33.65■■■□□ 2.98
TRAPPC6A-203ENST00000587818 CHIC1Q5VXU3 224 aa33.61■■■□□ 2.97
TRAPPC6A-203ENST00000587818 CTTNBP2Q8WZ74 1663 aa33.61■■■□□ 2.97
TRAPPC6A-203ENST00000587818 FAM69CQ0P6D2 419 aa33.59■■■□□ 2.97
TRAPPC6A-203ENST00000587818 KIF13AQ9H1H9 1805 aa33.58■■■□□ 2.97
TRAPPC6A-203ENST00000587818 KIAA0556O60303 1618 aa33.54■■■□□ 2.96
TRAPPC6A-203ENST00000587818 MAPKBP1O60336 1514 aa33.52■■■□□ 2.96
TRAPPC6A-203ENST00000587818 UACAQ9BZF9 1416 aa33.52■■■□□ 2.96
TRAPPC6A-203ENST00000587818 ABCC10Q5T3U5 1492 aa33.5■■■□□ 2.95
TRAPPC6A-203ENST00000587818 EEA1Q15075 1411 aa33.49■■■□□ 2.95
TRAPPC6A-203ENST00000587818 P3H3Q8IVL6 736 aa33.47■■■□□ 2.95
TRAPPC6A-203ENST00000587818 ABCC2Q92887 1545 aa33.46■■■□□ 2.95
TRAPPC6A-203ENST00000587818 UHRF1BP1LA0JNW5 1464 aa33.44■■■□□ 2.94
TRAPPC6A-203ENST00000587818 GOLGA3Q08378 1498 aa33.43■■■□□ 2.94
TRAPPC6A-203ENST00000587818 DIP2BQ9P265 1576 aa33.4■■■□□ 2.94
TRAPPC6A-203ENST00000587818 RANGAP1P46060 587 aaPredicted RBP33.4■■■□□ 2.94
TRAPPC6A-203ENST00000587818 EHMT2Q96KQ7 1210 aa33.38■■■□□ 2.93
TRAPPC6A-203ENST00000587818 ASXL2Q76L83 1435 aa33.36■■■□□ 2.93
TRAPPC6A-203ENST00000587818 PLB1Q6P1J6 1458 aa33.35■■■□□ 2.93
TRAPPC6A-203ENST00000587818 KDM5BQ9UGL1 1544 aa33.31■■■□□ 2.92
TRAPPC6A-203ENST00000587818 TSPOAP1O95153 1857 aa33.29■■■□□ 2.92
TRAPPC6A-203ENST00000587818 ZCCHC11Q5TAX3 1644 aaKnown RBP33.25■■■□□ 2.91
TRAPPC6A-203ENST00000587818 ARID3CA6NKF2 412 aa33.23■■■□□ 2.91
TRAPPC6A-203ENST00000587818 ABCA8O94911 1581 aa33.22■■■□□ 2.91
TRAPPC6A-203ENST00000587818 KIF21BO75037 1637 aa33.2■■■□□ 2.9
TRAPPC6A-203ENST00000587818 UBTFP17480 764 aaKnown RBP33.17■■■□□ 2.9
TRAPPC6A-203ENST00000587818 SAMD9Q5K651 1589 aa33.16■■■□□ 2.9
TRAPPC6A-203ENST00000587818 EPRSP07814 1512 aaKnown RBP33.13■■■□□ 2.89
TRAPPC6A-203ENST00000587818 KCNH8Q96L42 1107 aa33.13■■■□□ 2.89
TRAPPC6A-203ENST00000587818 GLI2P10070 1586 aa33.11■■■□□ 2.89
TRAPPC6A-203ENST00000587818 FHOD3Q2V2M9 1422 aa33.08■■■□□ 2.89
TRAPPC6A-203ENST00000587818 WDR7Q9Y4E6 1490 aa33.05■■■□□ 2.88
TRAPPC6A-203ENST00000587818 ATP10BO94823 1461 aa33.03■■■□□ 2.88
TRAPPC6A-203ENST00000587818 PPRC1Q5VV67 1664 aaKnown RBP33.01■■■□□ 2.88
TRAPPC6A-203ENST00000587818 KDM6BO15054 1643 aa33■■■□□ 2.87
TRAPPC6A-203ENST00000587818 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP32.99■■■□□ 2.87
TRAPPC6A-203ENST00000587818 HNRNPUL2Q1KMD3 747 aaKnown RBP32.99■■■□□ 2.87
TRAPPC6A-203ENST00000587818 RAPGEF6Q8TEU7 1601 aa32.96■■■□□ 2.87
TRAPPC6A-203ENST00000587818 MAP3K4Q9Y6R4 1608 aa32.96■■■□□ 2.87
TRAPPC6A-203ENST00000587818 EFCAB5A4FU69 1503 aa32.89■■■□□ 2.86
TRAPPC6A-203ENST00000587818 AEBP2Q6ZN18 517 aaPredicted RBP32.88■■■□□ 2.85
TRAPPC6A-203ENST00000587818 NUP153P49790 1475 aaKnown RBP32.87■■■□□ 2.85
TRAPPC6A-203ENST00000587818 CD109Q6YHK3 1445 aa32.87■■■□□ 2.85
TRAPPC6A-203ENST00000587818 COL17A1Q9UMD9 1497 aaPredicted RBP32.85■■■□□ 2.85
TRAPPC6A-203ENST00000587818 TEX14Q8IWB6 1497 aa32.82■■■□□ 2.84
TRAPPC6A-203ENST00000587818 ATP1B4Q9UN42 357 aaPredicted RBP32.8■■■□□ 2.84
TRAPPC6A-203ENST00000587818 ARHGAP35Q9NRY4 1499 aa32.8■■■□□ 2.84
TRAPPC6A-203ENST00000587818 CFAP43Q8NDM7 1665 aa32.78■■■□□ 2.84
TRAPPC6A-203ENST00000587818 PLEKHD1A6NEE1 506 aa32.76■■■□□ 2.83
TRAPPC6A-203ENST00000587818 MAGI3Q5TCQ9 1506 aa32.74■■■□□ 2.83
TRAPPC6A-203ENST00000587818 FMN1Q68DA7 1419 aa32.65■■■□□ 2.82
TRAPPC6A-203ENST00000587818 CDK13Q14004 1512 aaKnown RBP32.65■■■□□ 2.82
TRAPPC6A-203ENST00000587818 ABCA9Q8IUA7 1624 aa32.64■■■□□ 2.82
TRAPPC6A-203ENST00000587818 KDM4FA0A1W2PPD8 638 aa32.61■■■□□ 2.81
TRAPPC6A-203ENST00000587818 HECW1Q76N89 1606 aa32.52■■■□□ 2.8
TRAPPC6A-203ENST00000587818 ARAP3Q8WWN8 1544 aa32.48■■■□□ 2.79
TRAPPC6A-203ENST00000587818 RAPGEF3O95398 923 aa32.48■■■□□ 2.79
TRAPPC6A-203ENST00000587818 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP32.47■■■□□ 2.79
TRAPPC6A-203ENST00000587818 CLIP1P30622 1438 aa32.47■■■□□ 2.79
TRAPPC6A-203ENST00000587818 CDK11AQ9UQ88 783 aaPredicted RBP32.46■■■□□ 2.79
TRAPPC6A-203ENST00000587818 PHLDB1Q86UU1 1377 aa32.45■■■□□ 2.78
TRAPPC6A-203ENST00000587818 NEO1Q92859 1461 aa32.42■■■□□ 2.78
TRAPPC6A-203ENST00000587818 LRRIQ1Q96JM4 1722 aa32.42■■■□□ 2.78
TRAPPC6A-203ENST00000587818 TTC37Q6PGP7 1564 aa32.41■■■□□ 2.78
TRAPPC6A-203ENST00000587818 CASKIN1Q8WXD9 1431 aa32.38■■■□□ 2.77
TRAPPC6A-203ENST00000587818 LOC105371045A0A1W2PR82 267 aa32.37■■■□□ 2.77
TRAPPC6A-203ENST00000587818 PCF11O94913 1555 aaKnown RBP32.36■■■□□ 2.77
TRAPPC6A-203ENST00000587818 ADGRL1O94910 1474 aa32.35■■■□□ 2.77
TRAPPC6A-203ENST00000587818 AKNAQ7Z591 1439 aa32.35■■■□□ 2.77
TRAPPC6A-203ENST00000587818 FANCAO15360 1455 aa32.35■■■□□ 2.77
TRAPPC6A-203ENST00000587818 TROQ12816 1431 aaPredicted RBP32.32■■■□□ 2.76
TRAPPC6A-203ENST00000587818 KIF14Q15058 1648 aa32.3■■■□□ 2.76
TRAPPC6A-203ENST00000587818 PLCH2O75038 1416 aa32.3■■■□□ 2.76
TRAPPC6A-203ENST00000587818 DENND4BO75064 1496 aaPredicted RBP32.26■■■□□ 2.75
TRAPPC6A-203ENST00000587818 FRMPD1Q5SYB0 1578 aa32.24■■■□□ 2.75
TRAPPC6A-203ENST00000587818 EFCAB2Q5VUJ9 269 aa32.23■■■□□ 2.75
TRAPPC6A-203ENST00000587818 CCDC18Q5T9S5 1454 aa32.23■■■□□ 2.75
TRAPPC6A-203ENST00000587818 FYCO1Q9BQS8 1478 aa32.23■■■□□ 2.75
TRAPPC6A-203ENST00000587818 CEP162Q5TB80 1403 aa32.21■■■□□ 2.75
TRAPPC6A-203ENST00000587818 CFAP74Q9C0B2 1584 aa32.2■■■□□ 2.75
TRAPPC6A-203ENST00000587818 MYO5CQ9NQX4 1742 aa32.19■■■□□ 2.74
TRAPPC6A-203ENST00000587818 SCAPERQ9BY12 1400 aa32.18■■■□□ 2.74
TRAPPC6A-203ENST00000587818 RICTORQ6R327 1708 aa32.17■■■□□ 2.74
TRAPPC6A-203ENST00000587818 ARID4BQ4LE39 1312 aaPredicted RBP32.12■■■□□ 2.73
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms