RNA–Protein interactions for RNA: ENST00000587740.5

NCLN-203, Transcript of nicalin, humanhuman

TSL 1 (best)

Gene NCLN, Length 1,210 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCLN-203ENST00000587740 RUSC2Q8N2Y8 1516 aa27.72■■■□□ 2.03
NCLN-203ENST00000587740 FAM69CQ0P6D2 419 aa27.7■■■□□ 2.02
NCLN-203ENST00000587740 ABCC10Q5T3U5 1492 aa27.7■■■□□ 2.02
NCLN-203ENST00000587740 MAPKBP1O60336 1514 aa27.64■■■□□ 2.02
NCLN-203ENST00000587740 ADCY10Q96PN6 1610 aa27.63■■■□□ 2.01
NCLN-203ENST00000587740 NPM1P06748 294 aaKnown RBP eCLIP27.62■■■□□ 2.01
NCLN-203ENST00000587740 DIP2BQ9P265 1576 aa27.6■■■□□ 2.01
NCLN-203ENST00000587740 KIAA0586Q9BVV6 1533 aa27.57■■■□□ 2
NCLN-203ENST00000587740 IGF1RP08069 1367 aa27.56■■■□□ 2
NCLN-203ENST00000587740 KDM4FA0A1W2PPD8 638 aa27.46■■□□□ 1.99
NCLN-203ENST00000587740 KDM6BO15054 1643 aa27.45■■□□□ 1.98
NCLN-203ENST00000587740 TSPOAP1O95153 1857 aa27.44■■□□□ 1.98
NCLN-203ENST00000587740 KIF27Q86VH2 1401 aa27.44■■□□□ 1.98
NCLN-203ENST00000587740 CUL7Q14999 1698 aa27.43■■□□□ 1.98
NCLN-203ENST00000587740 PTPRGP23470 1445 aa27.39■■□□□ 1.97
NCLN-203ENST00000587740 CARMIL1Q5VZK9 1371 aa27.35■■□□□ 1.97
NCLN-203ENST00000587740 TTBK1Q5TCY1 1321 aaPredicted RBP27.34■■□□□ 1.97
NCLN-203ENST00000587740 TNIKQ9UKE5 1360 aa27.29■■□□□ 1.96
NCLN-203ENST00000587740 ABCC2Q92887 1545 aa27.29■■□□□ 1.96
NCLN-203ENST00000587740 ASXL2Q76L83 1435 aa27.26■■□□□ 1.95
NCLN-203ENST00000587740 CARMIL2Q6F5E8 1435 aa27.25■■□□□ 1.95
NCLN-203ENST00000587740 PPRC1Q5VV67 1664 aaKnown RBP27.24■■□□□ 1.95
NCLN-203ENST00000587740 IQGAP2Q13576 1575 aa27.22■■□□□ 1.95
NCLN-203ENST00000587740 PLB1Q6P1J6 1458 aa27.21■■□□□ 1.95
NCLN-203ENST00000587740 GLI2P10070 1586 aa27.21■■□□□ 1.95
NCLN-203ENST00000587740 UHRF1BP1LA0JNW5 1464 aa27.19■■□□□ 1.94
NCLN-203ENST00000587740 DISP1Q96F81 1524 aa27.17■■□□□ 1.94
NCLN-203ENST00000587740 UACAQ9BZF9 1416 aa27.16■■□□□ 1.94
NCLN-203ENST00000587740 COL17A1Q9UMD9 1497 aaPredicted RBP27.14■■□□□ 1.94
NCLN-203ENST00000587740 EPRSP07814 1512 aaKnown RBP27.09■■□□□ 1.93
NCLN-203ENST00000587740 KDM5BQ9UGL1 1544 aa27.09■■□□□ 1.93
NCLN-203ENST00000587740 ADGRL1O94910 1474 aa27.07■■□□□ 1.92
NCLN-203ENST00000587740 MAP3K4Q9Y6R4 1608 aa27.05■■□□□ 1.92
NCLN-203ENST00000587740 UGGT2Q9NYU1 1516 aa27.05■■□□□ 1.92
NCLN-203ENST00000587740 ILDR1Q86SU0 546 aaPredicted RBP27.02■■□□□ 1.92
NCLN-203ENST00000587740 ZCCHC11Q5TAX3 1644 aaKnown RBP27.01■■□□□ 1.92
NCLN-203ENST00000587740 RAPGEF2Q9Y4G8 1499 aa27.01■■□□□ 1.91
NCLN-203ENST00000587740 KIAA0556O60303 1618 aa26.98■■□□□ 1.91
NCLN-203ENST00000587740 TEX14Q8IWB6 1497 aa26.95■■□□□ 1.91
NCLN-203ENST00000587740 WDR7Q9Y4E6 1490 aa26.9■■□□□ 1.9
NCLN-203ENST00000587740 HECW2Q9P2P5 1572 aa26.84■■□□□ 1.89
NCLN-203ENST00000587740 KCNH8Q96L42 1107 aa26.79■■□□□ 1.88
NCLN-203ENST00000587740 CD109Q6YHK3 1445 aa26.79■■□□□ 1.88
NCLN-203ENST00000587740 MAGI3Q5TCQ9 1506 aa26.79■■□□□ 1.88
NCLN-203ENST00000587740 ABCA8O94911 1581 aa26.79■■□□□ 1.88
NCLN-203ENST00000587740 CTTNBP2Q8WZ74 1663 aa26.78■■□□□ 1.88
NCLN-203ENST00000587740 CFAP43Q8NDM7 1665 aa26.76■■□□□ 1.87
NCLN-203ENST00000587740 GOLGA3Q08378 1498 aa26.74■■□□□ 1.87
NCLN-203ENST00000587740 PRXQ9BXM0 1461 aa26.66■■□□□ 1.86
NCLN-203ENST00000587740 KIF21BO75037 1637 aa26.63■■□□□ 1.85
NCLN-203ENST00000587740 ARID3CA6NKF2 412 aa26.6■■□□□ 1.85
NCLN-203ENST00000587740 ARAP3Q8WWN8 1544 aa26.6■■□□□ 1.85
NCLN-203ENST00000587740 ATP10BO94823 1461 aa26.59■■□□□ 1.85
NCLN-203ENST00000587740 P3H3Q8IVL6 736 aa26.57■■□□□ 1.84
NCLN-203ENST00000587740 ABCA9Q8IUA7 1624 aa26.49■■□□□ 1.83
NCLN-203ENST00000587740 RAPGEF3O95398 923 aa26.47■■□□□ 1.83
NCLN-203ENST00000587740 PHLDB1Q86UU1 1377 aa26.46■■□□□ 1.83
NCLN-203ENST00000587740 ADAMTSL3P82987 1691 aa26.45■■□□□ 1.82
NCLN-203ENST00000587740 PTPRMP28827 1452 aa26.44■■□□□ 1.82
NCLN-203ENST00000587740 FAM9AQ8IZU1 332 aaPredicted RBP26.42■■□□□ 1.82
NCLN-203ENST00000587740 SAMD9Q5K651 1589 aa26.41■■□□□ 1.82
NCLN-203ENST00000587740 NEO1Q92859 1461 aa26.39■■□□□ 1.82
NCLN-203ENST00000587740 RAPGEF6Q8TEU7 1601 aa26.39■■□□□ 1.81
NCLN-203ENST00000587740 FRMPD1Q5SYB0 1578 aa26.37■■□□□ 1.81
NCLN-203ENST00000587740 FBXO41Q8TF61 875 aa26.36■■□□□ 1.81
NCLN-203ENST00000587740 CSRNP3Q8WYN3 585 aa26.34■■□□□ 1.81
NCLN-203ENST00000587740 BCORL1Q5H9F3 1711 aa26.34■■□□□ 1.81
NCLN-203ENST00000587740 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.33■■□□□ 1.81
NCLN-203ENST00000587740 HNRNPUL2Q1KMD3 747 aaKnown RBP26.33■■□□□ 1.81
NCLN-203ENST00000587740 NUP153P49790 1475 aaKnown RBP26.33■■□□□ 1.81
NCLN-203ENST00000587740 MADDQ8WXG6 1647 aa26.3■■□□□ 1.8
NCLN-203ENST00000587740 ARID4BQ4LE39 1312 aaPredicted RBP26.28■■□□□ 1.8
NCLN-203ENST00000587740 RANGAP1P46060 587 aaPredicted RBP26.25■■□□□ 1.79
NCLN-203ENST00000587740 PCF11O94913 1555 aaKnown RBP26.24■■□□□ 1.79
NCLN-203ENST00000587740 LMTK3Q96Q04 1460 aa26.24■■□□□ 1.79
NCLN-203ENST00000587740 FHOD3Q2V2M9 1422 aa26.24■■□□□ 1.79
NCLN-203ENST00000587740 ARHGEF40Q8TER5 1519 aa26.22■■□□□ 1.79
NCLN-203ENST00000587740 RICTORQ6R327 1708 aa26.22■■□□□ 1.79
NCLN-203ENST00000587740 DENND4BO75064 1496 aaPredicted RBP26.21■■□□□ 1.79
NCLN-203ENST00000587740 PLEKHD1A6NEE1 506 aa26.2■■□□□ 1.78
NCLN-203ENST00000587740 AKNAQ7Z591 1439 aa26.2■■□□□ 1.78
NCLN-203ENST00000587740 RIMS1Q86UR5 1692 aaKnown RBP26.19■■□□□ 1.78
NCLN-203ENST00000587740 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP26.17■■□□□ 1.781e-9■■■□□ 16.2
NCLN-203ENST00000587740 FANCAO15360 1455 aa26.16■■□□□ 1.78
NCLN-203ENST00000587740 SIGLEC1Q9BZZ2 1709 aa26.14■■□□□ 1.77
NCLN-203ENST00000587740 CHIC1Q5VXU3 224 aa26.13■■□□□ 1.77
NCLN-203ENST00000587740 TTC37Q6PGP7 1564 aa26.12■■□□□ 1.77
NCLN-203ENST00000587740 HSPA2P54652 639 aa26.11■■□□□ 1.77
NCLN-203ENST00000587740 YEATS2Q9ULM3 1422 aa26.11■■□□□ 1.77
NCLN-203ENST00000587740 ZMYM4Q5VZL5 1548 aa26.09■■□□□ 1.77
NCLN-203ENST00000587740 CFAP74Q9C0B2 1584 aa26.09■■□□□ 1.77
NCLN-203ENST00000587740 EEA1Q15075 1411 aa26.08■■□□□ 1.77
NCLN-203ENST00000587740 PLPPR3Q6T4P5 718 aa26.08■■□□□ 1.77
NCLN-203ENST00000587740 ZFYVE16Q7Z3T8 1539 aa26.06■■□□□ 1.76
NCLN-203ENST00000587740 POGZQ7Z3K3 1410 aa26.05■■□□□ 1.76
NCLN-203ENST00000587740 CDK13Q14004 1512 aaKnown RBP26.04■■□□□ 1.76
NCLN-203ENST00000587740 EFCAB5A4FU69 1503 aa26.03■■□□□ 1.76
NCLN-203ENST00000587740 HECW1Q76N89 1606 aa26.03■■□□□ 1.76
NCLN-203ENST00000587740 MAGI2Q86UL8 1455 aa26.02■■□□□ 1.76
NCLN-203ENST00000587740 MLECQ14165 292 aa26.01■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 74.7 ms