RNA–Protein interactions for RNA: ENST00000587582.1

CDH20-204, Transcript of cadherin 20, humanhuman

TSL 4

Gene CDH20, Length 533 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH20-204ENST00000587582 JPH4Q96JJ6 628 aa23.34■■□□□ 1.33
CDH20-204ENST00000587582 PRG4Q92954 1404 aaPredicted RBP23.33■■□□□ 1.33
CDH20-204ENST00000587582 KIAA0586Q9BVV6 1533 aa23.3■■□□□ 1.32
CDH20-204ENST00000587582 RAPGEF2Q9Y4G8 1499 aa23.27■■□□□ 1.32
CDH20-204ENST00000587582 TRHP20396 242 aaPredicted RBP23.2■■□□□ 1.3
CDH20-204ENST00000587582 IQGAP2Q13576 1575 aa23.18■■□□□ 1.3
CDH20-204ENST00000587582 TTBK1Q5TCY1 1321 aaPredicted RBP23.13■■□□□ 1.29
CDH20-204ENST00000587582 CHIC1Q5VXU3 224 aa23.12■■□□□ 1.29
CDH20-204ENST00000587582 FAM9AQ8IZU1 332 aaPredicted RBP23.12■■□□□ 1.29
CDH20-204ENST00000587582 PRXQ9BXM0 1461 aa23.11■■□□□ 1.29
CDH20-204ENST00000587582 CSRNP3Q8WYN3 585 aa23.1■■□□□ 1.29
CDH20-204ENST00000587582 CARMIL2Q6F5E8 1435 aa23.08■■□□□ 1.29
CDH20-204ENST00000587582 EEA1Q15075 1411 aa23.06■■□□□ 1.28
CDH20-204ENST00000587582 CTTNBP2Q8WZ74 1663 aa23.05■■□□□ 1.28
CDH20-204ENST00000587582 PTPRGP23470 1445 aa23.03■■□□□ 1.28
CDH20-204ENST00000587582 TNIKQ9UKE5 1360 aa23.01■■□□□ 1.27
CDH20-204ENST00000587582 DISP1Q96F81 1524 aa23.01■■□□□ 1.27
CDH20-204ENST00000587582 UGGT2Q9NYU1 1516 aa23.01■■□□□ 1.27
CDH20-204ENST00000587582 ADCY10Q96PN6 1610 aa22.98■■□□□ 1.27
CDH20-204ENST00000587582 NPM1P06748 294 aaKnown RBP eCLIP22.97■■□□□ 1.27
CDH20-204ENST00000587582 KIAA0556O60303 1618 aa22.96■■□□□ 1.27
CDH20-204ENST00000587582 EHMT2Q96KQ7 1210 aa22.91■■□□□ 1.26
CDH20-204ENST00000587582 GOLGA3Q08378 1498 aa22.89■■□□□ 1.25
CDH20-204ENST00000587582 RANGAP1P46060 587 aaPredicted RBP22.87■■□□□ 1.25
CDH20-204ENST00000587582 UACAQ9BZF9 1416 aa22.85■■□□□ 1.25
CDH20-204ENST00000587582 KIF21BO75037 1637 aa22.85■■□□□ 1.25
CDH20-204ENST00000587582 P3H3Q8IVL6 736 aa22.84■■□□□ 1.25
CDH20-204ENST00000587582 MAPKBP1O60336 1514 aa22.82■■□□□ 1.24
CDH20-204ENST00000587582 ABCC2Q92887 1545 aa22.82■■□□□ 1.24
CDH20-204ENST00000587582 UHRF1BP1LA0JNW5 1464 aa22.79■■□□□ 1.24
CDH20-204ENST00000587582 FAM69CQ0P6D2 419 aa22.78■■□□□ 1.24
CDH20-204ENST00000587582 PLB1Q6P1J6 1458 aa22.78■■□□□ 1.24
CDH20-204ENST00000587582 KIF13AQ9H1H9 1805 aa22.77■■□□□ 1.24
CDH20-204ENST00000587582 UBTFP17480 764 aaKnown RBP22.76■■□□□ 1.23
CDH20-204ENST00000587582 ABCC10Q5T3U5 1492 aa22.76■■□□□ 1.23
CDH20-204ENST00000587582 DIP2BQ9P265 1576 aa22.73■■□□□ 1.23
CDH20-204ENST00000587582 SAMD9Q5K651 1589 aa22.72■■□□□ 1.23
CDH20-204ENST00000587582 ASXL2Q76L83 1435 aa22.72■■□□□ 1.23
CDH20-204ENST00000587582 KDM5BQ9UGL1 1544 aa22.7■■□□□ 1.22
CDH20-204ENST00000587582 ZCCHC11Q5TAX3 1644 aaKnown RBP22.7■■□□□ 1.22
CDH20-204ENST00000587582 ABCA8O94911 1581 aa22.69■■□□□ 1.22
CDH20-204ENST00000587582 ARID3CA6NKF2 412 aa22.67■■□□□ 1.22
CDH20-204ENST00000587582 FHOD3Q2V2M9 1422 aa22.66■■□□□ 1.22
CDH20-204ENST00000587582 EFCAB5A4FU69 1503 aa22.61■■□□□ 1.21
CDH20-204ENST00000587582 TSPOAP1O95153 1857 aa22.59■■□□□ 1.21
CDH20-204ENST00000587582 WDR7Q9Y4E6 1490 aa22.57■■□□□ 1.2
CDH20-204ENST00000587582 RAPGEF6Q8TEU7 1601 aa22.57■■□□□ 1.2
CDH20-204ENST00000587582 EPRSP07814 1512 aaKnown RBP22.57■■□□□ 1.2
CDH20-204ENST00000587582 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.53■■□□□ 1.2
CDH20-204ENST00000587582 HNRNPUL2Q1KMD3 747 aaKnown RBP22.53■■□□□ 1.2
CDH20-204ENST00000587582 KCNH8Q96L42 1107 aa22.53■■□□□ 1.2
CDH20-204ENST00000587582 GLI2P10070 1586 aa22.53■■□□□ 1.2
CDH20-204ENST00000587582 ATP10BO94823 1461 aa22.52■■□□□ 1.2
CDH20-204ENST00000587582 ARHGAP35Q9NRY4 1499 aa22.5■■□□□ 1.19
CDH20-204ENST00000587582 NUP153P49790 1475 aaKnown RBP22.49■■□□□ 1.19
CDH20-204ENST00000587582 MAP3K4Q9Y6R4 1608 aa22.45■■□□□ 1.18
CDH20-204ENST00000587582 ATP1B4Q9UN42 357 aaPredicted RBP22.44■■□□□ 1.18
CDH20-204ENST00000587582 PPRC1Q5VV67 1664 aaKnown RBP22.43■■□□□ 1.18
CDH20-204ENST00000587582 KDM6BO15054 1643 aa22.43■■□□□ 1.18
CDH20-204ENST00000587582 FMN1Q68DA7 1419 aa22.41■■□□□ 1.18
CDH20-204ENST00000587582 CD109Q6YHK3 1445 aa22.39■■□□□ 1.17
CDH20-204ENST00000587582 TEX14Q8IWB6 1497 aa22.38■■□□□ 1.17
CDH20-204ENST00000587582 CFAP43Q8NDM7 1665 aa22.36■■□□□ 1.17
CDH20-204ENST00000587582 CDK13Q14004 1512 aaKnown RBP22.36■■□□□ 1.17
CDH20-204ENST00000587582 HECW1Q76N89 1606 aa22.35■■□□□ 1.17
CDH20-204ENST00000587582 CLIP1P30622 1438 aa22.34■■□□□ 1.17
CDH20-204ENST00000587582 PLEKHD1A6NEE1 506 aa22.34■■□□□ 1.17
CDH20-204ENST00000587582 MAGI3Q5TCQ9 1506 aa22.3■■□□□ 1.16
CDH20-204ENST00000587582 ABCA9Q8IUA7 1624 aa22.28■■□□□ 1.16
CDH20-204ENST00000587582 COL17A1Q9UMD9 1497 aaPredicted RBP22.27■■□□□ 1.16
CDH20-204ENST00000587582 PCF11O94913 1555 aaKnown RBP22.26■■□□□ 1.15
CDH20-204ENST00000587582 LOC105371045A0A1W2PR82 267 aa22.23■■□□□ 1.15
CDH20-204ENST00000587582 CASKIN1Q8WXD9 1431 aa22.22■■□□□ 1.15
CDH20-204ENST00000587582 CDK11AQ9UQ88 783 aaPredicted RBP22.21■■□□□ 1.15
CDH20-204ENST00000587582 CEP162Q5TB80 1403 aa22.21■■□□□ 1.15
CDH20-204ENST00000587582 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.19■■□□□ 1.14
CDH20-204ENST00000587582 LRRIQ1Q96JM4 1722 aa22.19■■□□□ 1.14
CDH20-204ENST00000587582 TTC37Q6PGP7 1564 aa22.18■■□□□ 1.14
CDH20-204ENST00000587582 FYCO1Q9BQS8 1478 aa22.16■■□□□ 1.14
CDH20-204ENST00000587582 CCDC18Q5T9S5 1454 aa22.15■■□□□ 1.14
CDH20-204ENST00000587582 AEBP2Q6ZN18 517 aaPredicted RBP22.13■■□□□ 1.13
CDH20-204ENST00000587582 TROQ12816 1431 aaPredicted RBP22.13■■□□□ 1.13
CDH20-204ENST00000587582 NEO1Q92859 1461 aa22.12■■□□□ 1.13
CDH20-204ENST00000587582 KIF14Q15058 1648 aa22.11■■□□□ 1.13
CDH20-204ENST00000587582 ARAP3Q8WWN8 1544 aa22.11■■□□□ 1.13
CDH20-204ENST00000587582 PHLDB1Q86UU1 1377 aa22.1■■□□□ 1.13
CDH20-204ENST00000587582 FANCAO15360 1455 aa22.09■■□□□ 1.13
CDH20-204ENST00000587582 RAPGEF3O95398 923 aa22.07■■□□□ 1.12
CDH20-204ENST00000587582 CFAP74Q9C0B2 1584 aa22.05■■□□□ 1.12
CDH20-204ENST00000587582 AKNAQ7Z591 1439 aa22.05■■□□□ 1.12
CDH20-204ENST00000587582 PLCH2O75038 1416 aa22.04■■□□□ 1.12
CDH20-204ENST00000587582 MYO5CQ9NQX4 1742 aa22.03■■□□□ 1.12
CDH20-204ENST00000587582 DENND4BO75064 1496 aaPredicted RBP22■■□□□ 1.11
CDH20-204ENST00000587582 ARHGAP5Q13017 1502 aa22■■□□□ 1.11
CDH20-204ENST00000587582 FRMPD1Q5SYB0 1578 aa21.99■■□□□ 1.11
CDH20-204ENST00000587582 ADGRL1O94910 1474 aa21.98■■□□□ 1.11
CDH20-204ENST00000587582 KDM4FA0A1W2PPD8 638 aa21.98■■□□□ 1.11
CDH20-204ENST00000587582 EFCAB2Q5VUJ9 269 aa21.98■■□□□ 1.11
CDH20-204ENST00000587582 MTUS2Q5JR59 1369 aa21.97■■□□□ 1.11
CDH20-204ENST00000587582 SCAPERQ9BY12 1400 aa21.95■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms