RNA–Protein interactions for RNA: ENST00000587173.5

VAT1-205, Transcript of vesicle amine transport 1, humanhuman

TSL 2 BASIC

Gene VAT1, Length 1,174 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1-205ENST00000587173 IGF1RP08069 1367 aa27.48■■□□□ 1.99
VAT1-205ENST00000587173 KIAA0586Q9BVV6 1533 aa27.4■■□□□ 1.98
VAT1-205ENST00000587173 CUL7Q14999 1698 aa27.4■■□□□ 1.98
VAT1-205ENST00000587173 CARMIL1Q5VZK9 1371 aa27.32■■□□□ 1.96
VAT1-205ENST00000587173 NPM1P06748 294 aaKnown RBP eCLIP27.31■■□□□ 1.96
VAT1-205ENST00000587173 AEBP2Q6ZN18 517 aaPredicted RBP27.27■■□□□ 1.96
VAT1-205ENST00000587173 KIF13AQ9H1H9 1805 aa27.27■■□□□ 1.96
VAT1-205ENST00000587173 ADCY10Q96PN6 1610 aa27.26■■□□□ 1.95
VAT1-205ENST00000587173 FAM69CQ0P6D2 419 aa27.24■■□□□ 1.95
VAT1-205ENST00000587173 MAPKBP1O60336 1514 aa27.24■■□□□ 1.95
VAT1-205ENST00000587173 ABCC10Q5T3U5 1492 aa27.24■■□□□ 1.95
VAT1-205ENST00000587173 PTPRGP23470 1445 aa27.17■■□□□ 1.94
VAT1-205ENST00000587173 DIP2BQ9P265 1576 aa27.15■■□□□ 1.94
VAT1-205ENST00000587173 CARMIL2Q6F5E8 1435 aa27.15■■□□□ 1.94
VAT1-205ENST00000587173 TTBK1Q5TCY1 1321 aaPredicted RBP27.14■■□□□ 1.93
VAT1-205ENST00000587173 TNIKQ9UKE5 1360 aa27.12■■□□□ 1.93
VAT1-205ENST00000587173 IQGAP2Q13576 1575 aa27.11■■□□□ 1.93
VAT1-205ENST00000587173 RAPGEF2Q9Y4G8 1499 aa27.05■■□□□ 1.92
VAT1-205ENST00000587173 ABCC2Q92887 1545 aa27.02■■□□□ 1.92
VAT1-205ENST00000587173 DISP1Q96F81 1524 aa27■■□□□ 1.91
VAT1-205ENST00000587173 UHRF1BP1LA0JNW5 1464 aa26.96■■□□□ 1.91
VAT1-205ENST00000587173 UACAQ9BZF9 1416 aa26.96■■□□□ 1.91
VAT1-205ENST00000587173 UGGT2Q9NYU1 1516 aa26.95■■□□□ 1.91
VAT1-205ENST00000587173 ASXL2Q76L83 1435 aa26.94■■□□□ 1.9
VAT1-205ENST00000587173 KDM6BO15054 1643 aa26.92■■□□□ 1.9
VAT1-205ENST00000587173 PLB1Q6P1J6 1458 aa26.92■■□□□ 1.9
VAT1-205ENST00000587173 TSPOAP1O95153 1857 aa26.89■■□□□ 1.9
VAT1-205ENST00000587173 KIAA0556O60303 1618 aa26.88■■□□□ 1.89
VAT1-205ENST00000587173 KDM5BQ9UGL1 1544 aa26.84■■□□□ 1.89
VAT1-205ENST00000587173 GLI2P10070 1586 aa26.84■■□□□ 1.89
VAT1-205ENST00000587173 EPRSP07814 1512 aaKnown RBP26.77■■□□□ 1.88
VAT1-205ENST00000587173 PRXQ9BXM0 1461 aa26.76■■□□□ 1.87
VAT1-205ENST00000587173 CTTNBP2Q8WZ74 1663 aa26.76■■□□□ 1.87
VAT1-205ENST00000587173 ZCCHC11Q5TAX3 1644 aaKnown RBP26.76■■□□□ 1.87
VAT1-205ENST00000587173 PPRC1Q5VV67 1664 aaKnown RBP26.75■■□□□ 1.87
VAT1-205ENST00000587173 GOLGA3Q08378 1498 aa26.74■■□□□ 1.87
VAT1-205ENST00000587173 KDM4FA0A1W2PPD8 638 aa26.7■■□□□ 1.86
VAT1-205ENST00000587173 MAP3K4Q9Y6R4 1608 aa26.67■■□□□ 1.86
VAT1-205ENST00000587173 WDR7Q9Y4E6 1490 aa26.67■■□□□ 1.86
VAT1-205ENST00000587173 TEX14Q8IWB6 1497 aa26.64■■□□□ 1.86
VAT1-205ENST00000587173 ABCA8O94911 1581 aa26.63■■□□□ 1.85
VAT1-205ENST00000587173 COL17A1Q9UMD9 1497 aaPredicted RBP26.62■■□□□ 1.85
VAT1-205ENST00000587173 CSRNP3Q8WYN3 585 aa26.55■■□□□ 1.84
VAT1-205ENST00000587173 KCNH8Q96L42 1107 aa26.54■■□□□ 1.84
VAT1-205ENST00000587173 P3H3Q8IVL6 736 aa26.53■■□□□ 1.84
VAT1-205ENST00000587173 CD109Q6YHK3 1445 aa26.52■■□□□ 1.84
VAT1-205ENST00000587173 FAM9AQ8IZU1 332 aaPredicted RBP26.5■■□□□ 1.83
VAT1-205ENST00000587173 MAGI3Q5TCQ9 1506 aa26.48■■□□□ 1.83
VAT1-205ENST00000587173 ADGRL1O94910 1474 aa26.48■■□□□ 1.83
VAT1-205ENST00000587173 ARID3CA6NKF2 412 aa26.47■■□□□ 1.83
VAT1-205ENST00000587173 CFAP43Q8NDM7 1665 aa26.45■■□□□ 1.82
VAT1-205ENST00000587173 EEA1Q15075 1411 aa26.43■■□□□ 1.82
VAT1-205ENST00000587173 ATP10BO94823 1461 aa26.42■■□□□ 1.82
VAT1-205ENST00000587173 SAMD9Q5K651 1589 aa26.42■■□□□ 1.82
VAT1-205ENST00000587173 RANGAP1P46060 587 aaPredicted RBP26.34■■□□□ 1.81
VAT1-205ENST00000587173 RAPGEF6Q8TEU7 1601 aa26.33■■□□□ 1.81
VAT1-205ENST00000587173 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.3■■□□□ 1.8
VAT1-205ENST00000587173 HNRNPUL2Q1KMD3 747 aaKnown RBP26.3■■□□□ 1.8
VAT1-205ENST00000587173 FHOD3Q2V2M9 1422 aa26.29■■□□□ 1.8
VAT1-205ENST00000587173 ABCA9Q8IUA7 1624 aa26.27■■□□□ 1.8
VAT1-205ENST00000587173 ARAP3Q8WWN8 1544 aa26.26■■□□□ 1.79
VAT1-205ENST00000587173 NUP153P49790 1475 aaKnown RBP26.26■■□□□ 1.79
VAT1-205ENST00000587173 PHLDB1Q86UU1 1377 aa26.22■■□□□ 1.79
VAT1-205ENST00000587173 KIF21BO75037 1637 aa26.2■■□□□ 1.78
VAT1-205ENST00000587173 NEO1Q92859 1461 aa26.17■■□□□ 1.78
VAT1-205ENST00000587173 EFCAB5A4FU69 1503 aa26.16■■□□□ 1.78
VAT1-205ENST00000587173 RAPGEF3O95398 923 aa26.14■■□□□ 1.78
VAT1-205ENST00000587173 PLEKHD1A6NEE1 506 aa26.13■■□□□ 1.77
VAT1-205ENST00000587173 HECW2Q9P2P5 1572 aa26.11■■□□□ 1.77
VAT1-205ENST00000587173 EHMT2Q96KQ7 1210 aa26.08■■□□□ 1.77
VAT1-205ENST00000587173 UBTFP17480 764 aaKnown RBP26.05■■□□□ 1.76
VAT1-205ENST00000587173 FRMPD1Q5SYB0 1578 aa26.04■■□□□ 1.76
VAT1-205ENST00000587173 CHIC1Q5VXU3 224 aa26.02■■□□□ 1.76
VAT1-205ENST00000587173 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP26.02■■□□□ 1.761e-6■■■□□ 17.1
VAT1-205ENST00000587173 CDK13Q14004 1512 aaKnown RBP26■■□□□ 1.75
VAT1-205ENST00000587173 DENND4BO75064 1496 aaPredicted RBP26■■□□□ 1.75
VAT1-205ENST00000587173 AKNAQ7Z591 1439 aa26■■□□□ 1.75
VAT1-205ENST00000587173 FANCAO15360 1455 aa25.99■■□□□ 1.75
VAT1-205ENST00000587173 TTC37Q6PGP7 1564 aa25.97■■□□□ 1.75
VAT1-205ENST00000587173 ARID4BQ4LE39 1312 aaPredicted RBP25.96■■□□□ 1.75
VAT1-205ENST00000587173 ATP1B4Q9UN42 357 aaPredicted RBP25.95■■□□□ 1.74
VAT1-205ENST00000587173 ADAMTSL3P82987 1691 aa25.95■■□□□ 1.74
VAT1-205ENST00000587173 FMN1Q68DA7 1419 aa25.95■■□□□ 1.74
VAT1-205ENST00000587173 CFAP74Q9C0B2 1584 aa25.95■■□□□ 1.74
VAT1-205ENST00000587173 ARHGAP35Q9NRY4 1499 aa25.94■■□□□ 1.74
VAT1-205ENST00000587173 PTPRMP28827 1452 aa25.93■■□□□ 1.74
VAT1-205ENST00000587173 ILDR1Q86SU0 546 aaPredicted RBP25.93■■□□□ 1.74
VAT1-205ENST00000587173 ARHGEF40Q8TER5 1519 aa25.93■■□□□ 1.74
VAT1-205ENST00000587173 HECW1Q76N89 1606 aa25.9■■□□□ 1.74
VAT1-205ENST00000587173 RICTORQ6R327 1708 aa25.9■■□□□ 1.74
VAT1-205ENST00000587173 BCORL1Q5H9F3 1711 aa25.89■■□□□ 1.74
VAT1-205ENST00000587173 PLCH2O75038 1416 aa25.87■■□□□ 1.73
VAT1-205ENST00000587173 ZMYM4Q5VZL5 1548 aa25.85■■□□□ 1.73
VAT1-205ENST00000587173 MADDQ8WXG6 1647 aa25.85■■□□□ 1.73
VAT1-205ENST00000587173 CDK11AQ9UQ88 783 aaPredicted RBP25.84■■□□□ 1.73
VAT1-205ENST00000587173 ZFYVE16Q7Z3T8 1539 aa25.83■■□□□ 1.72
VAT1-205ENST00000587173 SCAPERQ9BY12 1400 aa25.82■■□□□ 1.72
VAT1-205ENST00000587173 YEATS2Q9ULM3 1422 aa25.82■■□□□ 1.72
VAT1-205ENST00000587173 POGZQ7Z3K3 1410 aa25.8■■□□□ 1.72
VAT1-205ENST00000587173 MAGI2Q86UL8 1455 aa25.79■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms