RNA–Protein interactions for RNA: ENST00000586944.5

PTBP1-210, Transcript of polypyrimidine tract binding protein 1, humanhuman

TSL 2

Gene PTBP1, Length 4,661 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-210ENST00000586944 EIF4G2P78344 907 aaKnown RBP eCLIP23.65■■□□□ 1.381e-7■□□□□ 8.1
PTBP1-210ENST00000586944 CUX2O14529 1486 aa23.63■■□□□ 1.37
PTBP1-210ENST00000586944 TMC1Q8TDI8 760 aa23.62■■□□□ 1.37
PTBP1-210ENST00000586944 CANXP27824 592 aaKnown RBP23.62■■□□□ 1.37
PTBP1-210ENST00000586944 CARMIL1Q5VZK9 1371 aa23.62■■□□□ 1.37
PTBP1-210ENST00000586944 CCNB3Q8WWL7 1395 aa23.62■■□□□ 1.37
PTBP1-210ENST00000586944 VPS8Q8N3P4 1428 aa23.61■■□□□ 1.37
PTBP1-210ENST00000586944 BCL11AQ9H165 835 aa23.58■■□□□ 1.37
PTBP1-210ENST00000586944 NPM2Q86SE8 214 aaKnown RBP23.56■■□□□ 1.36
PTBP1-210ENST00000586944 SENP3-EIF4A1A0A087X0R7 540 aa23.54■■□□□ 1.36
PTBP1-210ENST00000586944 TOP2AP11388 1531 aaKnown RBP23.52■■□□□ 1.36
PTBP1-210ENST00000586944 PLEKHD1A6NEE1 506 aa23.52■■□□□ 1.36
PTBP1-210ENST00000586944 KCNH8Q96L42 1107 aa23.52■■□□□ 1.36
PTBP1-210ENST00000586944 CFDP1Q9UEE9 299 aaPredicted RBP23.51■■□□□ 1.35
PTBP1-210ENST00000586944 ANP32AP39687 249 aaKnown RBP23.48■■□□□ 1.35
PTBP1-210ENST00000586944 RUSC2Q8N2Y8 1516 aa23.48■■□□□ 1.35
PTBP1-210ENST00000586944 RGL3Q3MIN7 710 aa23.48■■□□□ 1.35
PTBP1-210ENST00000586944 NPM1P06748 294 aaKnown RBP eCLIP23.45■■□□□ 1.34
PTBP1-210ENST00000586944 CCDC136Q96JN2 1154 aa23.44■■□□□ 1.34
PTBP1-210ENST00000586944 FHAD1B1AJZ9 1412 aa23.43■■□□□ 1.34
PTBP1-210ENST00000586944 SMARCA2P51531 1590 aa23.4■■□□□ 1.34
PTBP1-210ENST00000586944 NEFMP07197 916 aa23.39■■□□□ 1.34
PTBP1-210ENST00000586944 SLC24A1O60721 1099 aa23.36■■□□□ 1.33
PTBP1-210ENST00000586944 RAPGEF2Q9Y4G8 1499 aa23.36■■□□□ 1.33
PTBP1-210ENST00000586944 STAG3Q9UJ98 1225 aa23.35■■□□□ 1.33
PTBP1-210ENST00000586944 ZBTB47Q9UFB7 747 aaPredicted RBP23.34■■□□□ 1.33
PTBP1-210ENST00000586944 SENP3Q9H4L4 574 aaPredicted RBP23.34■■□□□ 1.33
PTBP1-210ENST00000586944 SUPT16HQ9Y5B9 1047 aaKnown RBP23.34■■□□□ 1.33
PTBP1-210ENST00000586944 TDRD9Q8NDG6 1382 aaKnown RBP23.32■■□□□ 1.32
PTBP1-210ENST00000586944 ATAD2BQ9ULI0 1458 aa23.31■■□□□ 1.32
PTBP1-210ENST00000586944 SMARCA4P51532 1647 aa23.31■■□□□ 1.32
PTBP1-210ENST00000586944 SETD5Q9C0A6 1442 aa23.31■■□□□ 1.32
PTBP1-210ENST00000586944 EIF4G1Q04637 1599 aaKnown RBP23.29■■□□□ 1.32
PTBP1-210ENST00000586944 WDR43Q15061 677 aaKnown RBP eCLIP23.29■■□□□ 1.328e-6■■□□□ 11.7
PTBP1-210ENST00000586944 RAB3GAP2Q9H2M9 1393 aa23.28■■□□□ 1.32
PTBP1-210ENST00000586944 CARD11Q9BXL7 1154 aa23.28■■□□□ 1.32
PTBP1-210ENST00000586944 PLPPR3Q6T4P5 718 aa23.26■■□□□ 1.31
PTBP1-210ENST00000586944 ESF1Q9H501 851 aaKnown RBP23.26■■□□□ 1.31
PTBP1-210ENST00000586944 FOXD1Q16676 465 aa23.24■■□□□ 1.31
PTBP1-210ENST00000586944 ARHGAP35Q9NRY4 1499 aa23.2■■□□□ 1.3
PTBP1-210ENST00000586944 TIMELESSQ9UNS1 1208 aa23.18■■□□□ 1.3
PTBP1-210ENST00000586944 CADPSQ9ULU8 1353 aa23.17■■□□□ 1.3
PTBP1-210ENST00000586944 ERCC6Q03468 1493 aa23.16■■□□□ 1.3
PTBP1-210ENST00000586944 NBR1Q14596 966 aa23.15■■□□□ 1.3
PTBP1-210ENST00000586944 FHOD3Q2V2M9 1422 aa23.14■■□□□ 1.29
PTBP1-210ENST00000586944 HSPA5P11021 654 aaKnown RBP23.12■■□□□ 1.29
PTBP1-210ENST00000586944 GOLGA6L2Q8N9W4 650 aaPredicted RBP23.1■■□□□ 1.29
PTBP1-210ENST00000586944 DCAF11Q8TEB1 546 aa23.1■■□□□ 1.29
PTBP1-210ENST00000586944 PPP1R15AO75807 674 aaPredicted RBP23.07■■□□□ 1.28
PTBP1-210ENST00000586944 FMN1Q68DA7 1419 aa23.05■■□□□ 1.28
PTBP1-210ENST00000586944 KNSTRNQ9Y448 316 aa23.04■■□□□ 1.28
PTBP1-210ENST00000586944 DHX57Q6P158 1386 aaKnown RBP23.04■■□□□ 1.28
PTBP1-210ENST00000586944 MPHOSPH9Q99550 1183 aa23.03■■□□□ 1.28
PTBP1-210ENST00000586944 PDS5BQ9NTI5 1447 aa23.03■■□□□ 1.28
PTBP1-210ENST00000586944 PKD2Q13563 968 aa23.03■■□□□ 1.28
PTBP1-210ENST00000586944 CCER2I3L3R5 266 aa23■■□□□ 1.27
PTBP1-210ENST00000586944 CC2D1BQ5T0F9 858 aaKnown RBP23■■□□□ 1.27
PTBP1-210ENST00000586944 B4GALNT3Q6L9W6 998 aa22.98■■□□□ 1.27
PTBP1-210ENST00000586944 UPF2Q9HAU5 1272 aaKnown RBP22.97■■□□□ 1.27
PTBP1-210ENST00000586944 PPP4R2Q9NY27 417 aa22.94■■□□□ 1.26
PTBP1-210ENST00000586944 L3MBTL2Q969R5 705 aa22.93■■□□□ 1.26
PTBP1-210ENST00000586944 NEUROD2Q15784 382 aa22.93■■□□□ 1.26
PTBP1-210ENST00000586944 CDCA8Q53HL2 280 aa22.92■■□□□ 1.26
PTBP1-210ENST00000586944 HSP90AA1P07900 732 aaKnown RBP22.91■■□□□ 1.26
PTBP1-210ENST00000586944 IGF1RP08069 1367 aa22.89■■□□□ 1.25
PTBP1-210ENST00000586944 TNNT2P45379 298 aaPredicted RBP22.88■■□□□ 1.25
PTBP1-210ENST00000586944 FANCD2Q9BXW9 1451 aa22.85■■□□□ 1.25
PTBP1-210ENST00000586944 NUP155O75694 1391 aa22.85■■□□□ 1.25
PTBP1-210ENST00000586944 PPM1GO15355 546 aaPredicted RBP22.82■■□□□ 1.24
PTBP1-210ENST00000586944 TMF1P82094 1093 aa22.81■■□□□ 1.24
PTBP1-210ENST00000586944 ANP32EQ9BTT0 268 aa22.81■■□□□ 1.24
PTBP1-210ENST00000586944 CARMIL2Q6F5E8 1435 aa22.81■■□□□ 1.24
PTBP1-210ENST00000586944 HNRNPMP52272 730 aaKnown RBP eCLIP22.79■■□□□ 1.244e-7■■■■□ 20
PTBP1-210ENST00000586944 CFAP53Q96M91 514 aa22.78■■□□□ 1.24
PTBP1-210ENST00000586944 ARXQ96QS3 562 aa22.78■■□□□ 1.24
PTBP1-210ENST00000586944 PLEKHG5O94827 1062 aa22.77■■□□□ 1.24
PTBP1-210ENST00000586944 FGD5Q6ZNL6 1462 aa22.77■■□□□ 1.24
PTBP1-210ENST00000586944 KIF21BO75037 1637 aa22.76■■□□□ 1.23
PTBP1-210ENST00000586944 RAD54L2Q9Y4B4 1467 aa22.75■■□□□ 1.23
PTBP1-210ENST00000586944 JPH4Q96JJ6 628 aa22.75■■□□□ 1.23
PTBP1-210ENST00000586944 ANKRD30AQ9BXX3 1397 aa22.74■■□□□ 1.23
PTBP1-210ENST00000586944 RGS3P49796 1198 aa22.73■■□□□ 1.23
PTBP1-210ENST00000586944 RBM19Q9Y4C8 960 aaKnown RBP22.72■■□□□ 1.23
PTBP1-210ENST00000586944 FRAT1Q92837 279 aaPredicted RBP22.71■■□□□ 1.23
PTBP1-210ENST00000586944 GGT6Q6P531 493 aa22.69■■□□□ 1.22
PTBP1-210ENST00000586944 POGKQ9P215 609 aa22.69■■□□□ 1.22
PTBP1-210ENST00000586944 SYNJ1O43426 1573 aa22.68■■□□□ 1.22
PTBP1-210ENST00000586944 SAFB2Q14151 953 aaKnown RBP eCLIP22.68■■□□□ 1.22
PTBP1-210ENST00000586944 PHLDB1Q86UU1 1377 aa22.68■■□□□ 1.22
PTBP1-210ENST00000586944 ROCK2O75116 1388 aaKnown RBP22.67■■□□□ 1.22
PTBP1-210ENST00000586944 NCAPD3P42695 1498 aa22.67■■□□□ 1.22
PTBP1-210ENST00000586944 CCDC18Q5T9S5 1454 aa22.65■■□□□ 1.22
PTBP1-210ENST00000586944 ARID4BQ4LE39 1312 aaPredicted RBP22.64■■□□□ 1.22
PTBP1-210ENST00000586944 EFCAB2Q5VUJ9 269 aa22.64■■□□□ 1.22
PTBP1-210ENST00000586944 C14orf37Q86TY3 774 aa22.64■■□□□ 1.22
PTBP1-210ENST00000586944 LAS1LQ9Y4W2 734 aaKnown RBP22.64■■□□□ 1.21
PTBP1-210ENST00000586944 U2SURPO15042 1029 aaKnown RBP22.64■■□□□ 1.21
PTBP1-210ENST00000586944 ARAP1Q96P48 1450 aa22.63■■□□□ 1.21
PTBP1-210ENST00000586944 ZBTB7CA1YPR0 619 aa22.63■■□□□ 1.21
PTBP1-210ENST00000586944 TSHZ2Q9NRE2 1034 aa22.63■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms