RNA–Protein interactions for RNA: ENST00000585828.5

ATP6V0A1-207, Transcript of ATPase H+ transporting V0 subunit a1, humanhuman

TSL 1 (best)

Gene ATP6V0A1, Length 2,139 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V0A1-207ENST00000585828 PBRM1Q86U86 1689 aa23.6■■□□□ 1.37
ATP6V0A1-207ENST00000585828 KANK4Q5T7N3 995 aaPredicted RBP23.6■■□□□ 1.37
ATP6V0A1-207ENST00000585828 TIAM1Q13009 1591 aa23.6■■□□□ 1.37
ATP6V0A1-207ENST00000585828 CCER1Q8TC90 406 aaPredicted RBP23.59■■□□□ 1.37
ATP6V0A1-207ENST00000585828 RRBP1Q9P2E9 1410 aaKnown RBP23.58■■□□□ 1.37
ATP6V0A1-207ENST00000585828 AQRO60306 1485 aaKnown RBP eCLIP23.58■■□□□ 1.373e-7■■■■■ 43.1
ATP6V0A1-207ENST00000585828 IFT140Q96RY7 1462 aa23.56■■□□□ 1.36
ATP6V0A1-207ENST00000585828 SAMD9Q5K651 1589 aa23.55■■□□□ 1.36
ATP6V0A1-207ENST00000585828 CFAP43Q8NDM7 1665 aa23.54■■□□□ 1.36
ATP6V0A1-207ENST00000585828 PCF11O94913 1555 aaKnown RBP23.52■■□□□ 1.36
ATP6V0A1-207ENST00000585828 FYCO1Q9BQS8 1478 aa23.52■■□□□ 1.36
ATP6V0A1-207ENST00000585828 ADAMTS12P58397 1594 aa23.51■■□□□ 1.35
ATP6V0A1-207ENST00000585828 PELP1Q8IZL8 1130 aaKnown RBP23.5■■□□□ 1.35
ATP6V0A1-207ENST00000585828 GRIN2BQ13224 1484 aa23.49■■□□□ 1.35
ATP6V0A1-207ENST00000585828 CASKIN1Q8WXD9 1431 aa23.49■■□□□ 1.35
ATP6V0A1-207ENST00000585828 LRRC9Q6ZRR7 1453 aa23.48■■□□□ 1.35
ATP6V0A1-207ENST00000585828 FHOD3Q2V2M9 1422 aa23.48■■□□□ 1.35
ATP6V0A1-207ENST00000585828 FMN1Q68DA7 1419 aa23.46■■□□□ 1.35
ATP6V0A1-207ENST00000585828 THOC2Q8NI27 1593 aaKnown RBP23.46■■□□□ 1.35
ATP6V0A1-207ENST00000585828 HNRNPUL2Q1KMD3 747 aaKnown RBP23.43■■□□□ 1.34
ATP6V0A1-207ENST00000585828 SNAPC4Q5SXM2 1469 aa23.42■■□□□ 1.34
ATP6V0A1-207ENST00000585828 CCNB3Q8WWL7 1395 aa23.41■■□□□ 1.34
ATP6V0A1-207ENST00000585828 ZNF608Q9ULD9 1512 aaPredicted RBP23.38■■□□□ 1.33
ATP6V0A1-207ENST00000585828 ERCC6Q03468 1493 aa23.38■■□□□ 1.33
ATP6V0A1-207ENST00000585828 P3H3Q8IVL6 736 aa23.35■■□□□ 1.33
ATP6V0A1-207ENST00000585828 IQGAP2Q13576 1575 aa23.35■■□□□ 1.33
ATP6V0A1-207ENST00000585828 EIF4G3O43432 1585 aaKnown RBP23.33■■□□□ 1.33
ATP6V0A1-207ENST00000585828 UGGT2Q9NYU1 1516 aa23.29■■□□□ 1.32
ATP6V0A1-207ENST00000585828 PHLDB1Q86UU1 1377 aa23.28■■□□□ 1.32
ATP6V0A1-207ENST00000585828 SCAF1Q9H7N4 1312 aaKnown RBP23.27■■□□□ 1.32
ATP6V0A1-207ENST00000585828 CLSPNQ9HAW4 1339 aa23.27■■□□□ 1.32
ATP6V0A1-207ENST00000585828 LRRIQ1Q96JM4 1722 aa23.26■■□□□ 1.31
ATP6V0A1-207ENST00000585828 MAGI1Q96QZ7 1491 aaPredicted RBP23.26■■□□□ 1.31
ATP6V0A1-207ENST00000585828 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.25■■□□□ 1.31
ATP6V0A1-207ENST00000585828 KIAA0586Q9BVV6 1533 aa23.24■■□□□ 1.31
ATP6V0A1-207ENST00000585828 GRIN2AQ12879 1464 aa23.22■■□□□ 1.31
ATP6V0A1-207ENST00000585828 DHX57Q6P158 1386 aaKnown RBP23.18■■□□□ 1.3
ATP6V0A1-207ENST00000585828 CCDC18Q5T9S5 1454 aa23.18■■□□□ 1.3
ATP6V0A1-207ENST00000585828 HECW1Q76N89 1606 aa23.16■■□□□ 1.3
ATP6V0A1-207ENST00000585828 EHBP1L1Q8N3D4 1523 aa23.15■■□□□ 1.3
ATP6V0A1-207ENST00000585828 SYNJ2O15056 1496 aa23.15■■□□□ 1.3
ATP6V0A1-207ENST00000585828 ATP1B4Q9UN42 357 aaPredicted RBP23.12■■□□□ 1.29
ATP6V0A1-207ENST00000585828 KIAA0556O60303 1618 aa23.12■■□□□ 1.29
ATP6V0A1-207ENST00000585828 ARHGEF11O15085 1522 aa23.12■■□□□ 1.29
ATP6V0A1-207ENST00000585828 DISP1Q96F81 1524 aa23.12■■□□□ 1.29
ATP6V0A1-207ENST00000585828 MTUS2Q5JR59 1369 aa23.11■■□□□ 1.29
ATP6V0A1-207ENST00000585828 SUPT6HQ7KZ85 1726 aaKnown RBP23.1■■□□□ 1.29
ATP6V0A1-207ENST00000585828 FGD6Q6ZV73 1430 aa23.09■■□□□ 1.29
ATP6V0A1-207ENST00000585828 NUP160Q12769 1436 aa23.06■■□□□ 1.28
ATP6V0A1-207ENST00000585828 CEP170Q5SW79 1584 aa23.06■■□□□ 1.28
ATP6V0A1-207ENST00000585828 EPRSP07814 1512 aaKnown RBP23.06■■□□□ 1.28
ATP6V0A1-207ENST00000585828 NCOA2Q15596 1464 aa23.06■■□□□ 1.28
ATP6V0A1-207ENST00000585828 SETD5Q9C0A6 1442 aa23.05■■□□□ 1.28
ATP6V0A1-207ENST00000585828 MAGI3Q5TCQ9 1506 aa23.05■■□□□ 1.28
ATP6V0A1-207ENST00000585828 RAB3GAP2Q9H2M9 1393 aa23.03■■□□□ 1.28
ATP6V0A1-207ENST00000585828 MYOM3Q5VTT5 1437 aa23.03■■□□□ 1.28
ATP6V0A1-207ENST00000585828 ACIN1Q9UKV3 1341 aaKnown RBP22.98■■□□□ 1.27
ATP6V0A1-207ENST00000585828 FAM50AQ14320 339 aaKnown RBP22.98■■□□□ 1.27
ATP6V0A1-207ENST00000585828 CHMP7Q8WUX9 453 aaPredicted RBP22.97■■□□□ 1.27
ATP6V0A1-207ENST00000585828 ITGAEP38570 1179 aa22.96■■□□□ 1.27
ATP6V0A1-207ENST00000585828 RAPGEF6Q8TEU7 1601 aa22.95■■□□□ 1.26
ATP6V0A1-207ENST00000585828 TCOF1Q13428 1488 aaKnown RBP22.94■■□□□ 1.26
ATP6V0A1-207ENST00000585828 CDK13Q14004 1512 aaKnown RBP22.92■■□□□ 1.26
ATP6V0A1-207ENST00000585828 ZNF316A6NFI3 1004 aaPredicted RBP22.92■■□□□ 1.26
ATP6V0A1-207ENST00000585828 NUP153P49790 1475 aaKnown RBP22.92■■□□□ 1.26
ATP6V0A1-207ENST00000585828 PTPN23Q9H3S7 1636 aa22.92■■□□□ 1.26
ATP6V0A1-207ENST00000585828 MAPKBP1O60336 1514 aa22.91■■□□□ 1.26
ATP6V0A1-207ENST00000585828 MIA2Q96PC5 1412 aa22.89■■□□□ 1.26
ATP6V0A1-207ENST00000585828 HFM1A2PYH4 1435 aa22.87■■□□□ 1.25
ATP6V0A1-207ENST00000585828 CARMIL2Q6F5E8 1435 aa22.87■■□□□ 1.25
ATP6V0A1-207ENST00000585828 PTPRKQ15262 1439 aa22.86■■□□□ 1.25
ATP6V0A1-207ENST00000585828 NEUROD1Q13562 356 aa22.84■■□□□ 1.25
ATP6V0A1-207ENST00000585828 DIEXFQ68CQ4 756 aaKnown RBP22.84■■□□□ 1.25
ATP6V0A1-207ENST00000585828 JPH4Q96JJ6 628 aa22.83■■□□□ 1.25
ATP6V0A1-207ENST00000585828 AKNAQ7Z591 1439 aa22.8■■□□□ 1.24
ATP6V0A1-207ENST00000585828 CENPBP07199 599 aaPredicted RBP22.79■■□□□ 1.24
ATP6V0A1-207ENST00000585828 NAIPQ13075 1403 aa22.77■■□□□ 1.24
ATP6V0A1-207ENST00000585828 ABCA8O94911 1581 aa22.77■■□□□ 1.24
ATP6V0A1-207ENST00000585828 FBLN2P98095 1184 aa22.77■■□□□ 1.24
ATP6V0A1-207ENST00000585828 ADCY10Q96PN6 1610 aa22.76■■□□□ 1.23
ATP6V0A1-207ENST00000585828 PLB1Q6P1J6 1458 aa22.75■■□□□ 1.23
ATP6V0A1-207ENST00000585828 TROQ12816 1431 aaPredicted RBP22.75■■□□□ 1.23
ATP6V0A1-207ENST00000585828 CDK11AQ9UQ88 783 aaPredicted RBP22.75■■□□□ 1.23
ATP6V0A1-207ENST00000585828 GCC2Q8IWJ2 1684 aa22.74■■□□□ 1.23
ATP6V0A1-207ENST00000585828 UACAQ9BZF9 1416 aa22.72■■□□□ 1.23
ATP6V0A1-207ENST00000585828 CHD1O14646 1710 aa22.72■■□□□ 1.23
ATP6V0A1-207ENST00000585828 TIMELESSQ9UNS1 1208 aa22.7■■□□□ 1.23
ATP6V0A1-207ENST00000585828 SHROOM2Q13796 1616 aa22.69■■□□□ 1.22
ATP6V0A1-207ENST00000585828 DNMT1P26358 1616 aaKnown RBP22.66■■□□□ 1.22
ATP6V0A1-207ENST00000585828 ITSN2Q9NZM3 1697 aa22.66■■□□□ 1.22
ATP6V0A1-207ENST00000585828 PRG4Q92954 1404 aaPredicted RBP22.64■■□□□ 1.22
ATP6V0A1-207ENST00000585828 GTF3C3Q9Y5Q9 886 aa22.64■■□□□ 1.22
ATP6V0A1-207ENST00000585828 ROCK1Q13464 1354 aa22.64■■□□□ 1.21
ATP6V0A1-207ENST00000585828 ARID3CA6NKF2 412 aa22.62■■□□□ 1.21
ATP6V0A1-207ENST00000585828 DAPK1P53355 1430 aa22.61■■□□□ 1.21
ATP6V0A1-207ENST00000585828 ATP10BO94823 1461 aa22.6■■□□□ 1.21
ATP6V0A1-207ENST00000585828 GPATCH8Q9UKJ3 1502 aaKnown RBP22.59■■□□□ 1.21
ATP6V0A1-207ENST00000585828 KIF14Q15058 1648 aa22.59■■□□□ 1.21
ATP6V0A1-207ENST00000585828 ABCC5O15440 1437 aa22.58■■□□□ 1.21
ATP6V0A1-207ENST00000585828 PTPRGP23470 1445 aa22.56■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms