RNA–Protein interactions for RNA: ENST00000585600.5

LAMA3-204, Transcript of laminin subunit alpha 3, humanhuman

TSL 1 (best)

Gene LAMA3, Length 1,815 nt, Biotype non stop decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA3-204ENST00000585600 CEP170Q5SW79 1584 aa36.13■■■■□ 3.37
LAMA3-204ENST00000585600 KIAA0586Q9BVV6 1533 aa36.07■■■■□ 3.36
LAMA3-204ENST00000585600 RANGAP1P46060 587 aaPredicted RBP36.05■■■■□ 3.36
LAMA3-204ENST00000585600 CEP162Q5TB80 1403 aa36.02■■■■□ 3.36
LAMA3-204ENST00000585600 CTTNBP2Q8WZ74 1663 aa36.02■■■■□ 3.36
LAMA3-204ENST00000585600 IQGAP2Q13576 1575 aa35.96■■■■□ 3.35
LAMA3-204ENST00000585600 OSCARQ8IYS5 282 aa35.93■■■■□ 3.34
LAMA3-204ENST00000585600 CLIP1P30622 1438 aa35.92■■■■□ 3.34
LAMA3-204ENST00000585600 JPH4Q96JJ6 628 aa35.89■■■■□ 3.34
LAMA3-204ENST00000585600 CLASP1Q7Z460 1538 aa35.86■■■■□ 3.33
LAMA3-204ENST00000585600 ARHGAP35Q9NRY4 1499 aa35.83■■■■□ 3.33
LAMA3-204ENST00000585600 UGGT2Q9NYU1 1516 aa35.83■■■■□ 3.33
LAMA3-204ENST00000585600 P3H3Q8IVL6 736 aa35.77■■■■□ 3.32
LAMA3-204ENST00000585600 DISP1Q96F81 1524 aa35.72■■■■□ 3.31
LAMA3-204ENST00000585600 EFCAB5A4FU69 1503 aa35.72■■■■□ 3.31
LAMA3-204ENST00000585600 SAMD9Q5K651 1589 aa35.72■■■■□ 3.31
LAMA3-204ENST00000585600 ARAP1Q96P48 1450 aa35.7■■■■□ 3.31
LAMA3-204ENST00000585600 SHROOM2Q13796 1616 aa35.69■■■■□ 3.3
LAMA3-204ENST00000585600 PRG4Q92954 1404 aaPredicted RBP35.68■■■■□ 3.3
LAMA3-204ENST00000585600 FHOD3Q2V2M9 1422 aa35.66■■■■□ 3.3
LAMA3-204ENST00000585600 KIAA0556O60303 1618 aa35.62■■■■□ 3.29
LAMA3-204ENST00000585600 CARMIL2Q6F5E8 1435 aa35.61■■■■□ 3.29
LAMA3-204ENST00000585600 ERCC6L2Q5T890 1561 aa35.56■■■■□ 3.28
LAMA3-204ENST00000585600 VPS8Q8N3P4 1428 aa35.5■■■■□ 3.27
LAMA3-204ENST00000585600 TTBK1Q5TCY1 1321 aaPredicted RBP35.46■■■■□ 3.27
LAMA3-204ENST00000585600 FMN1Q68DA7 1419 aa35.43■■■■□ 3.26
LAMA3-204ENST00000585600 PTPRGP23470 1445 aa35.38■■■■□ 3.25
LAMA3-204ENST00000585600 ARHGEF11O15085 1522 aa35.3■■■■□ 3.24
LAMA3-204ENST00000585600 CASKIN1Q8WXD9 1431 aa35.29■■■■□ 3.24
LAMA3-204ENST00000585600 PLB1Q6P1J6 1458 aa35.27■■■■□ 3.24
LAMA3-204ENST00000585600 PCF11O94913 1555 aaKnown RBP35.27■■■■□ 3.24
LAMA3-204ENST00000585600 ATP1B4Q9UN42 357 aaPredicted RBP35.24■■■■□ 3.23
LAMA3-204ENST00000585600 PCGF6Q9BYE7 350 aa35.22■■■■□ 3.23
LAMA3-204ENST00000585600 FYCO1Q9BQS8 1478 aa35.22■■■■□ 3.23
LAMA3-204ENST00000585600 ABCA8O94911 1581 aa35.18■■■■□ 3.22
LAMA3-204ENST00000585600 UACAQ9BZF9 1416 aa35.16■■■■□ 3.22
LAMA3-204ENST00000585600 RAPGEF6Q8TEU7 1601 aa35.15■■■■□ 3.22
LAMA3-204ENST00000585600 RIMBP3CA6NJZ7 1639 aa35.15■■■■□ 3.22
LAMA3-204ENST00000585600 RIMBP3BA6NNM3 1639 aa35.15■■■■□ 3.22
LAMA3-204ENST00000585600 RIMBP3Q9UFD9 1639 aa35.15■■■■□ 3.22
LAMA3-204ENST00000585600 NUP153P49790 1475 aaKnown RBP35.13■■■■□ 3.21
LAMA3-204ENST00000585600 ARID3CA6NKF2 412 aa35.09■■■■□ 3.21
LAMA3-204ENST00000585600 HECW1Q76N89 1606 aa35.08■■■■□ 3.21
LAMA3-204ENST00000585600 APLP2Q06481 763 aa35.08■■■■□ 3.21
LAMA3-204ENST00000585600 EPRSP07814 1512 aaKnown RBP35.05■■■■□ 3.2
LAMA3-204ENST00000585600 ABCC2Q92887 1545 aa35.04■■■■□ 3.2
LAMA3-204ENST00000585600 HRCP23327 699 aa35.03■■■■□ 3.2
LAMA3-204ENST00000585600 UHRF1BP1LA0JNW5 1464 aa35.03■■■■□ 3.2
LAMA3-204ENST00000585600 CYB5RLQ6IPT4 315 aa35.02■■■■□ 3.2
LAMA3-204ENST00000585600 PPARGC1BQ86YN6 1023 aaKnown RBP35.02■■■■□ 3.2
LAMA3-204ENST00000585600 TRIM26Q12899 539 aaPredicted RBP35■■■■□ 3.19
LAMA3-204ENST00000585600 LRRIQ1Q96JM4 1722 aa35■■■■□ 3.19
LAMA3-204ENST00000585600 MAP3K1Q13233 1512 aa35■■■■□ 3.19
LAMA3-204ENST00000585600 KANK4Q5T7N3 995 aaPredicted RBP34.99■■■■□ 3.19
LAMA3-204ENST00000585600 CDK13Q14004 1512 aaKnown RBP34.99■■■■□ 3.19
LAMA3-204ENST00000585600 ATP10BO94823 1461 aa34.98■■■■□ 3.19
LAMA3-204ENST00000585600 TIAM1Q13009 1591 aa34.97■■■■□ 3.19
LAMA3-204ENST00000585600 CCDC18Q5T9S5 1454 aa34.97■■■■□ 3.19
LAMA3-204ENST00000585600 DNAJC5Q9H3Z4 198 aa34.95■■■■□ 3.18
LAMA3-204ENST00000585600 ADCY10Q96PN6 1610 aa34.94■■■■□ 3.18
LAMA3-204ENST00000585600 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP34.92■■■■□ 3.18
LAMA3-204ENST00000585600 HNRNPUL2Q1KMD3 747 aaKnown RBP34.92■■■■□ 3.18
LAMA3-204ENST00000585600 CFAP43Q8NDM7 1665 aa34.89■■■■□ 3.18
LAMA3-204ENST00000585600 KDM5BQ9UGL1 1544 aa34.88■■■■□ 3.17
LAMA3-204ENST00000585600 LRRC9Q6ZRR7 1453 aa34.87■■■■□ 3.17
LAMA3-204ENST00000585600 MAGI3Q5TCQ9 1506 aa34.83■■■■□ 3.17
LAMA3-204ENST00000585600 CDK11AQ9UQ88 783 aaPredicted RBP34.8■■■■□ 3.16
LAMA3-204ENST00000585600 MTUS2Q5JR59 1369 aa34.79■■■■□ 3.16
LAMA3-204ENST00000585600 ZCCHC11Q5TAX3 1644 aaKnown RBP34.77■■■■□ 3.16
LAMA3-204ENST00000585600 PLEKHD1A6NEE1 506 aa34.76■■■■□ 3.15
LAMA3-204ENST00000585600 NPM1P06748 294 aaKnown RBP eCLIP34.73■■■■□ 3.15
LAMA3-204ENST00000585600 TROQ12816 1431 aaPredicted RBP34.71■■■■□ 3.15
LAMA3-204ENST00000585600 EHBP1L1Q8N3D4 1523 aa34.7■■■■□ 3.14
LAMA3-204ENST00000585600 ASXL2Q76L83 1435 aa34.61■■■■□ 3.13
LAMA3-204ENST00000585600 NCOA2Q15596 1464 aa34.57■■■■□ 3.13
LAMA3-204ENST00000585600 WDR7Q9Y4E6 1490 aa34.56■■■■□ 3.12
LAMA3-204ENST00000585600 KCNH8Q96L42 1107 aa34.55■■■■□ 3.12
LAMA3-204ENST00000585600 PHLDB1Q86UU1 1377 aa34.55■■■■□ 3.12
LAMA3-204ENST00000585600 SUPT6HQ7KZ85 1726 aaKnown RBP34.52■■■■□ 3.12
LAMA3-204ENST00000585600 KIF14Q15058 1648 aa34.52■■■■□ 3.12
LAMA3-204ENST00000585600 MAPKBP1O60336 1514 aa34.49■■■■□ 3.11
LAMA3-204ENST00000585600 ABCC10Q5T3U5 1492 aa34.46■■■■□ 3.11
LAMA3-204ENST00000585600 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP34.41■■■■□ 3.1
LAMA3-204ENST00000585600 CCNB3Q8WWL7 1395 aa34.4■■■■□ 3.1
LAMA3-204ENST00000585600 MYOM3Q5VTT5 1437 aa34.39■■■■□ 3.1
LAMA3-204ENST00000585600 GPATCH8Q9UKJ3 1502 aaKnown RBP34.36■■■■□ 3.09
LAMA3-204ENST00000585600 TTC37Q6PGP7 1564 aa34.34■■■■□ 3.09
LAMA3-204ENST00000585600 RRBP1Q9P2E9 1410 aaKnown RBP34.33■■■■□ 3.09
LAMA3-204ENST00000585600 FGD6Q6ZV73 1430 aa34.3■■■■□ 3.08
LAMA3-204ENST00000585600 MIA2Q96PC5 1412 aa34.26■■■■□ 3.08
LAMA3-204ENST00000585600 CFDP1Q9UEE9 299 aaPredicted RBP34.26■■■■□ 3.08
LAMA3-204ENST00000585600 ABCA9Q8IUA7 1624 aa34.25■■■■□ 3.07
LAMA3-204ENST00000585600 PLCH2O75038 1416 aa34.23■■■■□ 3.07
LAMA3-204ENST00000585600 FAM69CQ0P6D2 419 aa34.21■■■■□ 3.07
LAMA3-204ENST00000585600 CDC42BPAQ5VT25 1732 aa34.21■■■■□ 3.07
LAMA3-204ENST00000585600 ZNF644Q9H582 1327 aaPredicted RBP34.2■■■■□ 3.07
LAMA3-204ENST00000585600 DIP2BQ9P265 1576 aa34.19■■■■□ 3.06
LAMA3-204ENST00000585600 FAM50AQ14320 339 aaKnown RBP34.18■■■■□ 3.06
LAMA3-204ENST00000585600 GLI2P10070 1586 aa34.18■■■■□ 3.06
LAMA3-204ENST00000585600 ITSN2Q9NZM3 1697 aa34.17■■■■□ 3.06
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms