RNA–Protein interactions for RNA: ENST00000585409.2

LSM7-203, Transcript of LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM7, Length 512 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM7-203ENST00000585409 RUSC2Q8N2Y8 1516 aa40.41■■■■■ 4.06
LSM7-203ENST00000585409 MAPKBP1O60336 1514 aa40.15■■■■■ 4.02
LSM7-203ENST00000585409 ABCC10Q5T3U5 1492 aa40.13■■■■■ 4.02
LSM7-203ENST00000585409 ADCY10Q96PN6 1610 aa40.13■■■■■ 4.02
LSM7-203ENST00000585409 KIAA0586Q9BVV6 1533 aa40.13■■■■■ 4.01
LSM7-203ENST00000585409 IGF1RP08069 1367 aa40.12■■■■■ 4.01
LSM7-203ENST00000585409 CUL7Q14999 1698 aa40.12■■■■■ 4.01
LSM7-203ENST00000585409 KIF27Q86VH2 1401 aa40.08■■■■■ 4.01
LSM7-203ENST00000585409 DIP2BQ9P265 1576 aa40.06■■■■■ 4
LSM7-203ENST00000585409 NPM1P06748 294 aaKnown RBP eCLIP40.04■■■■■ 4
LSM7-203ENST00000585409 FAM69CQ0P6D2 419 aa40.03■■■■■ 4
LSM7-203ENST00000585409 CARMIL1Q5VZK9 1371 aa39.83■■■■□ 3.97
LSM7-203ENST00000585409 PTPRGP23470 1445 aa39.79■■■■□ 3.96
LSM7-203ENST00000585409 TSPOAP1O95153 1857 aa39.77■■■■□ 3.96
LSM7-203ENST00000585409 KDM6BO15054 1643 aa39.76■■■■□ 3.96
LSM7-203ENST00000585409 IQGAP2Q13576 1575 aa39.71■■■■□ 3.95
LSM7-203ENST00000585409 TNIKQ9UKE5 1360 aa39.71■■■■□ 3.95
LSM7-203ENST00000585409 CARMIL2Q6F5E8 1435 aa39.7■■■■□ 3.95
LSM7-203ENST00000585409 ABCC2Q92887 1545 aa39.67■■■■□ 3.94
LSM7-203ENST00000585409 UHRF1BP1LA0JNW5 1464 aa39.58■■■■□ 3.93
LSM7-203ENST00000585409 TTBK1Q5TCY1 1321 aaPredicted RBP39.56■■■■□ 3.92
LSM7-203ENST00000585409 DISP1Q96F81 1524 aa39.55■■■■□ 3.92
LSM7-203ENST00000585409 ASXL2Q76L83 1435 aa39.55■■■■□ 3.92
LSM7-203ENST00000585409 GLI2P10070 1586 aa39.55■■■■□ 3.92
LSM7-203ENST00000585409 PLB1Q6P1J6 1458 aa39.54■■■■□ 3.92
LSM7-203ENST00000585409 PPRC1Q5VV67 1664 aaKnown RBP39.52■■■■□ 3.92
LSM7-203ENST00000585409 KDM4FA0A1W2PPD8 638 aa39.5■■■■□ 3.91
LSM7-203ENST00000585409 UACAQ9BZF9 1416 aa39.49■■■■□ 3.91
LSM7-203ENST00000585409 UGGT2Q9NYU1 1516 aa39.45■■■■□ 3.91
LSM7-203ENST00000585409 RAPGEF2Q9Y4G8 1499 aa39.45■■■■□ 3.91
LSM7-203ENST00000585409 KDM5BQ9UGL1 1544 aa39.4■■■■□ 3.9
LSM7-203ENST00000585409 KIAA0556O60303 1618 aa39.36■■■■□ 3.89
LSM7-203ENST00000585409 EPRSP07814 1512 aaKnown RBP39.33■■■■□ 3.89
LSM7-203ENST00000585409 ZCCHC11Q5TAX3 1644 aaKnown RBP39.32■■■■□ 3.89
LSM7-203ENST00000585409 MAP3K4Q9Y6R4 1608 aa39.32■■■■□ 3.89
LSM7-203ENST00000585409 CTTNBP2Q8WZ74 1663 aa39.22■■■■□ 3.87
LSM7-203ENST00000585409 COL17A1Q9UMD9 1497 aaPredicted RBP39.22■■■■□ 3.87
LSM7-203ENST00000585409 TEX14Q8IWB6 1497 aa39.17■■■■□ 3.86
LSM7-203ENST00000585409 ADGRL1O94910 1474 aa39.11■■■■□ 3.85
LSM7-203ENST00000585409 WDR7Q9Y4E6 1490 aa39.11■■■■□ 3.85
LSM7-203ENST00000585409 GOLGA3Q08378 1498 aa39.06■■■■□ 3.84
LSM7-203ENST00000585409 ABCA8O94911 1581 aa39.04■■■■□ 3.84
LSM7-203ENST00000585409 PRXQ9BXM0 1461 aa38.98■■■■□ 3.83
LSM7-203ENST00000585409 CFAP43Q8NDM7 1665 aa38.97■■■■□ 3.83
LSM7-203ENST00000585409 MAGI3Q5TCQ9 1506 aa38.94■■■■□ 3.82
LSM7-203ENST00000585409 CD109Q6YHK3 1445 aa38.89■■■■□ 3.82
LSM7-203ENST00000585409 KCNH8Q96L42 1107 aa38.8■■■■□ 3.8
LSM7-203ENST00000585409 HECW2Q9P2P5 1572 aa38.71■■■■□ 3.79
LSM7-203ENST00000585409 CHIC1Q5VXU3 224 aa38.68■■■■□ 3.78
LSM7-203ENST00000585409 ATP10BO94823 1461 aa38.66■■■■□ 3.78
LSM7-203ENST00000585409 ARAP3Q8WWN8 1544 aa38.64■■■■□ 3.78
LSM7-203ENST00000585409 SAMD9Q5K651 1589 aa38.63■■■■□ 3.77
LSM7-203ENST00000585409 ILDR1Q86SU0 546 aaPredicted RBP38.62■■■■□ 3.77
LSM7-203ENST00000585409 ABCA9Q8IUA7 1624 aa38.61■■■■□ 3.77
LSM7-203ENST00000585409 KIF21BO75037 1637 aa38.6■■■■□ 3.77
LSM7-203ENST00000585409 P3H3Q8IVL6 736 aa38.59■■■■□ 3.77
LSM7-203ENST00000585409 FAM9AQ8IZU1 332 aaPredicted RBP38.58■■■■□ 3.77
LSM7-203ENST00000585409 ARID3CA6NKF2 412 aa38.55■■■■□ 3.76
LSM7-203ENST00000585409 RAPGEF6Q8TEU7 1601 aa38.53■■■■□ 3.76
LSM7-203ENST00000585409 CSRNP3Q8WYN3 585 aa38.51■■■■□ 3.76
LSM7-203ENST00000585409 PHLDB1Q86UU1 1377 aa38.5■■■■□ 3.75
LSM7-203ENST00000585409 EEA1Q15075 1411 aa38.44■■■■□ 3.74
LSM7-203ENST00000585409 NEO1Q92859 1461 aa38.41■■■■□ 3.74
LSM7-203ENST00000585409 NUP153P49790 1475 aaKnown RBP38.38■■■■□ 3.73
LSM7-203ENST00000585409 ADAMTSL3P82987 1691 aa38.36■■■■□ 3.73
LSM7-203ENST00000585409 FRMPD1Q5SYB0 1578 aa38.33■■■■□ 3.73
LSM7-203ENST00000585409 RAPGEF3O95398 923 aa38.31■■■■□ 3.72
LSM7-203ENST00000585409 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP38.27■■■■□ 3.72
LSM7-203ENST00000585409 HNRNPUL2Q1KMD3 747 aaKnown RBP38.27■■■■□ 3.72
LSM7-203ENST00000585409 FHOD3Q2V2M9 1422 aa38.27■■■■□ 3.72
LSM7-203ENST00000585409 PTPRMP28827 1452 aa38.25■■■■□ 3.71
LSM7-203ENST00000585409 BCORL1Q5H9F3 1711 aa38.22■■■■□ 3.71
LSM7-203ENST00000585409 RICTORQ6R327 1708 aa38.16■■■■□ 3.7
LSM7-203ENST00000585409 RANGAP1P46060 587 aaPredicted RBP38.15■■■■□ 3.7
LSM7-203ENST00000585409 EFCAB5A4FU69 1503 aa38.14■■■■□ 3.7
LSM7-203ENST00000585409 PLEKHD1A6NEE1 506 aa38.13■■■■□ 3.69
LSM7-203ENST00000585409 ARHGEF40Q8TER5 1519 aa38.12■■■■□ 3.69
LSM7-203ENST00000585409 MADDQ8WXG6 1647 aa38.12■■■■□ 3.69
LSM7-203ENST00000585409 CFAP74Q9C0B2 1584 aa38.11■■■■□ 3.69
LSM7-203ENST00000585409 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP38.11■■■■□ 3.697e-7■■□□□ 14.3
LSM7-203ENST00000585409 DENND4BO75064 1496 aaPredicted RBP38.09■■■■□ 3.69
LSM7-203ENST00000585409 AKNAQ7Z591 1439 aa38.08■■■■□ 3.69
LSM7-203ENST00000585409 FANCAO15360 1455 aa38.07■■■■□ 3.68
LSM7-203ENST00000585409 TTC37Q6PGP7 1564 aa38.06■■■■□ 3.68
LSM7-203ENST00000585409 ARID4BQ4LE39 1312 aaPredicted RBP38.03■■■■□ 3.68
LSM7-203ENST00000585409 ZMYM4Q5VZL5 1548 aa38.01■■■■□ 3.67
LSM7-203ENST00000585409 PCF11O94913 1555 aaKnown RBP37.99■■■■□ 3.67
LSM7-203ENST00000585409 RIMS1Q86UR5 1692 aaKnown RBP37.97■■■■□ 3.67
LSM7-203ENST00000585409 CDK13Q14004 1512 aaKnown RBP37.95■■■■□ 3.67
LSM7-203ENST00000585409 LMTK3Q96Q04 1460 aa37.95■■■■□ 3.67
LSM7-203ENST00000585409 SIGLEC1Q9BZZ2 1709 aa37.92■■■■□ 3.66
LSM7-203ENST00000585409 ZFYVE16Q7Z3T8 1539 aa37.9■■■■□ 3.66
LSM7-203ENST00000585409 MAGI2Q86UL8 1455 aa37.88■■■■□ 3.65
LSM7-203ENST00000585409 FBXO41Q8TF61 875 aa37.87■■■■□ 3.65
LSM7-203ENST00000585409 YEATS2Q9ULM3 1422 aa37.87■■■■□ 3.65
LSM7-203ENST00000585409 POGZQ7Z3K3 1410 aa37.85■■■■□ 3.65
LSM7-203ENST00000585409 HECW1Q76N89 1606 aa37.84■■■■□ 3.65
LSM7-203ENST00000585409 PLCH2O75038 1416 aa37.84■■■■□ 3.65
LSM7-203ENST00000585409 SCAPERQ9BY12 1400 aa37.78■■■■□ 3.64
LSM7-203ENST00000585409 MYO5CQ9NQX4 1742 aa37.77■■■■□ 3.64
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms