RNA–Protein interactions for RNA: ENST00000584997.1

CASC3-210, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 3

Gene CASC3, Length 543 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-210ENST00000584997 RUSC2Q8N2Y8 1516 aa18.45■□□□□ 0.54
CASC3-210ENST00000584997 NPM1P06748 294 aaKnown RBP eCLIP18.38■□□□□ 0.53
CASC3-210ENST00000584997 CUL7Q14999 1698 aa18.34■□□□□ 0.53
CASC3-210ENST00000584997 ADCY10Q96PN6 1610 aa18.34■□□□□ 0.53
CASC3-210ENST00000584997 MAPKBP1O60336 1514 aa18.33■□□□□ 0.53
CASC3-210ENST00000584997 ABCC10Q5T3U5 1492 aa18.33■□□□□ 0.53
CASC3-210ENST00000584997 FAM69CQ0P6D2 419 aa18.33■□□□□ 0.52
CASC3-210ENST00000584997 KIAA0586Q9BVV6 1533 aa18.33■□□□□ 0.52
CASC3-210ENST00000584997 KIF27Q86VH2 1401 aa18.32■□□□□ 0.52
CASC3-210ENST00000584997 DIP2BQ9P265 1576 aa18.3■□□□□ 0.52
CASC3-210ENST00000584997 IGF1RP08069 1367 aa18.3■□□□□ 0.52
CASC3-210ENST00000584997 TSPOAP1O95153 1857 aa18.23■□□□□ 0.51
CASC3-210ENST00000584997 KDM6BO15054 1643 aa18.22■□□□□ 0.51
CASC3-210ENST00000584997 PTPRGP23470 1445 aa18.2■□□□□ 0.5
CASC3-210ENST00000584997 CARMIL1Q5VZK9 1371 aa18.19■□□□□ 0.5
CASC3-210ENST00000584997 TTBK1Q5TCY1 1321 aaPredicted RBP18.19■□□□□ 0.5
CASC3-210ENST00000584997 CARMIL2Q6F5E8 1435 aa18.18■□□□□ 0.5
CASC3-210ENST00000584997 IQGAP2Q13576 1575 aa18.16■□□□□ 0.5
CASC3-210ENST00000584997 TNIKQ9UKE5 1360 aa18.15■□□□□ 0.5
CASC3-210ENST00000584997 ABCC2Q92887 1545 aa18.13■□□□□ 0.49
CASC3-210ENST00000584997 ASXL2Q76L83 1435 aa18.08■□□□□ 0.49
CASC3-210ENST00000584997 PLB1Q6P1J6 1458 aa18.07■□□□□ 0.48
CASC3-210ENST00000584997 UHRF1BP1LA0JNW5 1464 aa18.06■□□□□ 0.48
CASC3-210ENST00000584997 KDM4FA0A1W2PPD8 638 aa18.05■□□□□ 0.48
CASC3-210ENST00000584997 UACAQ9BZF9 1416 aa18.05■□□□□ 0.48
CASC3-210ENST00000584997 GLI2P10070 1586 aa18.04■□□□□ 0.48
CASC3-210ENST00000584997 DISP1Q96F81 1524 aa18.04■□□□□ 0.48
CASC3-210ENST00000584997 PPRC1Q5VV67 1664 aaKnown RBP18.03■□□□□ 0.48
CASC3-210ENST00000584997 RAPGEF2Q9Y4G8 1499 aa18.03■□□□□ 0.48
CASC3-210ENST00000584997 UGGT2Q9NYU1 1516 aa18■□□□□ 0.47
CASC3-210ENST00000584997 KDM5BQ9UGL1 1544 aa17.98■□□□□ 0.47
CASC3-210ENST00000584997 KIAA0556O60303 1618 aa17.98■□□□□ 0.47
CASC3-210ENST00000584997 ZCCHC11Q5TAX3 1644 aaKnown RBP17.98■□□□□ 0.47
CASC3-210ENST00000584997 EPRSP07814 1512 aaKnown RBP17.97■□□□□ 0.47
CASC3-210ENST00000584997 MAP3K4Q9Y6R4 1608 aa17.96■□□□□ 0.47
CASC3-210ENST00000584997 TEX14Q8IWB6 1497 aa17.95■□□□□ 0.46
CASC3-210ENST00000584997 CTTNBP2Q8WZ74 1663 aa17.93■□□□□ 0.46
CASC3-210ENST00000584997 ADGRL1O94910 1474 aa17.9■□□□□ 0.46
CASC3-210ENST00000584997 COL17A1Q9UMD9 1497 aaPredicted RBP17.89■□□□□ 0.45
CASC3-210ENST00000584997 WDR7Q9Y4E6 1490 aa17.88■□□□□ 0.45
CASC3-210ENST00000584997 GOLGA3Q08378 1498 aa17.87■□□□□ 0.45
CASC3-210ENST00000584997 CFAP43Q8NDM7 1665 aa17.82■□□□□ 0.44
CASC3-210ENST00000584997 ABCA8O94911 1581 aa17.81■□□□□ 0.44
CASC3-210ENST00000584997 KCNH8Q96L42 1107 aa17.79■□□□□ 0.44
CASC3-210ENST00000584997 CD109Q6YHK3 1445 aa17.79■□□□□ 0.44
CASC3-210ENST00000584997 MAGI3Q5TCQ9 1506 aa17.77■□□□□ 0.44
CASC3-210ENST00000584997 PRXQ9BXM0 1461 aa17.76■□□□□ 0.43
CASC3-210ENST00000584997 FAM9AQ8IZU1 332 aaPredicted RBP17.74■□□□□ 0.43
CASC3-210ENST00000584997 HECW2Q9P2P5 1572 aa17.74■□□□□ 0.43
CASC3-210ENST00000584997 ARID3CA6NKF2 412 aa17.7■□□□□ 0.42
CASC3-210ENST00000584997 ILDR1Q86SU0 546 aaPredicted RBP17.7■□□□□ 0.42
CASC3-210ENST00000584997 P3H3Q8IVL6 736 aa17.68■□□□□ 0.42
CASC3-210ENST00000584997 KIF21BO75037 1637 aa17.68■□□□□ 0.42
CASC3-210ENST00000584997 ATP10BO94823 1461 aa17.65■□□□□ 0.42
CASC3-210ENST00000584997 ARAP3Q8WWN8 1544 aa17.64■□□□□ 0.41
CASC3-210ENST00000584997 ABCA9Q8IUA7 1624 aa17.63■□□□□ 0.41
CASC3-210ENST00000584997 SAMD9Q5K651 1589 aa17.62■□□□□ 0.41
CASC3-210ENST00000584997 RAPGEF6Q8TEU7 1601 aa17.61■□□□□ 0.41
CASC3-210ENST00000584997 CHIC1Q5VXU3 224 aa17.61■□□□□ 0.41
CASC3-210ENST00000584997 PHLDB1Q86UU1 1377 aa17.59■□□□□ 0.41
CASC3-210ENST00000584997 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.59■□□□□ 0.41
CASC3-210ENST00000584997 HNRNPUL2Q1KMD3 747 aaKnown RBP17.59■□□□□ 0.41
CASC3-210ENST00000584997 CSRNP3Q8WYN3 585 aa17.59■□□□□ 0.41
CASC3-210ENST00000584997 NEO1Q92859 1461 aa17.56■□□□□ 0.4
CASC3-210ENST00000584997 RAPGEF3O95398 923 aa17.53■□□□□ 0.4
CASC3-210ENST00000584997 RANGAP1P46060 587 aaPredicted RBP17.53■□□□□ 0.4
CASC3-210ENST00000584997 NUP153P49790 1475 aaKnown RBP17.52■□□□□ 0.4
CASC3-210ENST00000584997 ADAMTSL3P82987 1691 aa17.52■□□□□ 0.39
CASC3-210ENST00000584997 EEA1Q15075 1411 aa17.51■□□□□ 0.39
CASC3-210ENST00000584997 FHOD3Q2V2M9 1422 aa17.51■□□□□ 0.39
CASC3-210ENST00000584997 PTPRMP28827 1452 aa17.5■□□□□ 0.39
CASC3-210ENST00000584997 FRMPD1Q5SYB0 1578 aa17.49■□□□□ 0.39
CASC3-210ENST00000584997 ARID4BQ4LE39 1312 aaPredicted RBP17.47■□□□□ 0.39
CASC3-210ENST00000584997 BCORL1Q5H9F3 1711 aa17.47■□□□□ 0.39
CASC3-210ENST00000584997 PLEKHD1A6NEE1 506 aa17.46■□□□□ 0.39
CASC3-210ENST00000584997 MADDQ8WXG6 1647 aa17.45■□□□□ 0.38
CASC3-210ENST00000584997 CFAP74Q9C0B2 1584 aa17.45■□□□□ 0.38
CASC3-210ENST00000584997 ARHGEF40Q8TER5 1519 aa17.44■□□□□ 0.38
CASC3-210ENST00000584997 RICTORQ6R327 1708 aa17.43■□□□□ 0.38
CASC3-210ENST00000584997 DENND4BO75064 1496 aaPredicted RBP17.43■□□□□ 0.38
CASC3-210ENST00000584997 EFCAB5A4FU69 1503 aa17.42■□□□□ 0.38
CASC3-210ENST00000584997 FANCAO15360 1455 aa17.42■□□□□ 0.38
CASC3-210ENST00000584997 AKNAQ7Z591 1439 aa17.4■□□□□ 0.38
CASC3-210ENST00000584997 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.4■□□□□ 0.38
CASC3-210ENST00000584997 PCF11O94913 1555 aaKnown RBP17.4■□□□□ 0.38
CASC3-210ENST00000584997 RIMS1Q86UR5 1692 aaKnown RBP17.39■□□□□ 0.37
CASC3-210ENST00000584997 TTC37Q6PGP7 1564 aa17.39■□□□□ 0.37
CASC3-210ENST00000584997 CDK13Q14004 1512 aaKnown RBP17.36■□□□□ 0.37
CASC3-210ENST00000584997 FBXO41Q8TF61 875 aa17.35■□□□□ 0.37
CASC3-210ENST00000584997 POGZQ7Z3K3 1410 aa17.35■□□□□ 0.37
CASC3-210ENST00000584997 LMTK3Q96Q04 1460 aa17.35■□□□□ 0.37
CASC3-210ENST00000584997 ZMYM4Q5VZL5 1548 aa17.35■□□□□ 0.37
CASC3-210ENST00000584997 ZFYVE16Q7Z3T8 1539 aa17.35■□□□□ 0.37
CASC3-210ENST00000584997 MAGI2Q86UL8 1455 aa17.31■□□□□ 0.36
CASC3-210ENST00000584997 YEATS2Q9ULM3 1422 aa17.3■□□□□ 0.36
CASC3-210ENST00000584997 HECW1Q76N89 1606 aa17.3■□□□□ 0.36
CASC3-210ENST00000584997 PLPPR3Q6T4P5 718 aa17.3■□□□□ 0.36
CASC3-210ENST00000584997 SIGLEC1Q9BZZ2 1709 aa17.3■□□□□ 0.36
CASC3-210ENST00000584997 ATP1B4Q9UN42 357 aaPredicted RBP17.29■□□□□ 0.36
CASC3-210ENST00000584997 MYO5CQ9NQX4 1742 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms