RNA–Protein interactions for RNA: ENST00000584923.1

SNORD3A-201, Transcript of small nucleolar RNA, C/D box 3A, humanhuman

BASIC

Gene SNORD3A, Length 699 nt, Biotype snoRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD3A-201ENST00000584923 ERCC6L2Q5T890 1561 aa17.57■□□□□ 0.4
SNORD3A-201ENST00000584923 SHROOM2Q13796 1616 aa17.54■□□□□ 0.4
SNORD3A-201ENST00000584923 RAPGEF2Q9Y4G8 1499 aa17.48■□□□□ 0.39
SNORD3A-201ENST00000584923 EEA1Q15075 1411 aa17.47■□□□□ 0.39
SNORD3A-201ENST00000584923 JPH4Q96JJ6 628 aa17.46■□□□□ 0.39
SNORD3A-201ENST00000584923 KIAA0586Q9BVV6 1533 aa17.46■□□□□ 0.39
SNORD3A-201ENST00000584923 CSRNP3Q8WYN3 585 aa17.45■□□□□ 0.38
SNORD3A-201ENST00000584923 PRXQ9BXM0 1461 aa17.44■□□□□ 0.38
SNORD3A-201ENST00000584923 PRG4Q92954 1404 aaPredicted RBP17.38■□□□□ 0.37
SNORD3A-201ENST00000584923 IQGAP2Q13576 1575 aa17.32■□□□□ 0.36
SNORD3A-201ENST00000584923 FAM9AQ8IZU1 332 aaPredicted RBP17.32■□□□□ 0.36
SNORD3A-201ENST00000584923 TRHP20396 242 aaPredicted RBP17.31■□□□□ 0.36
SNORD3A-201ENST00000584923 CARMIL2Q6F5E8 1435 aa17.27■□□□□ 0.35
SNORD3A-201ENST00000584923 CTTNBP2Q8WZ74 1663 aa17.26■□□□□ 0.35
SNORD3A-201ENST00000584923 UGGT2Q9NYU1 1516 aa17.26■□□□□ 0.35
SNORD3A-201ENST00000584923 KIF21BO75037 1637 aa17.24■□□□□ 0.35
SNORD3A-201ENST00000584923 ADCY10Q96PN6 1610 aa17.22■□□□□ 0.35
SNORD3A-201ENST00000584923 DISP1Q96F81 1524 aa17.21■□□□□ 0.35
SNORD3A-201ENST00000584923 TNIKQ9UKE5 1360 aa17.21■□□□□ 0.35
SNORD3A-201ENST00000584923 KIF13AQ9H1H9 1805 aa17.2■□□□□ 0.34
SNORD3A-201ENST00000584923 PTPRGP23470 1445 aa17.2■□□□□ 0.34
SNORD3A-201ENST00000584923 GOLGA3Q08378 1498 aa17.18■□□□□ 0.34
SNORD3A-201ENST00000584923 KIAA0556O60303 1618 aa17.15■□□□□ 0.34
SNORD3A-201ENST00000584923 TTBK1Q5TCY1 1321 aaPredicted RBP17.12■□□□□ 0.33
SNORD3A-201ENST00000584923 UBTFP17480 764 aaKnown RBP17.11■□□□□ 0.33
SNORD3A-201ENST00000584923 MAPKBP1O60336 1514 aa17.1■□□□□ 0.33
SNORD3A-201ENST00000584923 NPM1P06748 294 aaKnown RBP eCLIP17.09■□□□□ 0.33
SNORD3A-201ENST00000584923 UACAQ9BZF9 1416 aa17.08■□□□□ 0.32
SNORD3A-201ENST00000584923 UHRF1BP1LA0JNW5 1464 aa17.07■□□□□ 0.32
SNORD3A-201ENST00000584923 SAMD9Q5K651 1589 aa17.06■□□□□ 0.32
SNORD3A-201ENST00000584923 DIP2BQ9P265 1576 aa17.06■□□□□ 0.32
SNORD3A-201ENST00000584923 EHMT2Q96KQ7 1210 aa17.05■□□□□ 0.32
SNORD3A-201ENST00000584923 P3H3Q8IVL6 736 aa17.04■□□□□ 0.32
SNORD3A-201ENST00000584923 ABCC10Q5T3U5 1492 aa17.04■□□□□ 0.32
SNORD3A-201ENST00000584923 ABCC2Q92887 1545 aa17.03■□□□□ 0.32
SNORD3A-201ENST00000584923 EFCAB5A4FU69 1503 aa17.01■□□□□ 0.31
SNORD3A-201ENST00000584923 TSPOAP1O95153 1857 aa17■□□□□ 0.31
SNORD3A-201ENST00000584923 RANGAP1P46060 587 aaPredicted RBP17■□□□□ 0.31
SNORD3A-201ENST00000584923 PLB1Q6P1J6 1458 aa16.99■□□□□ 0.31
SNORD3A-201ENST00000584923 FAM69CQ0P6D2 419 aa16.99■□□□□ 0.31
SNORD3A-201ENST00000584923 ABCA8O94911 1581 aa16.98■□□□□ 0.31
SNORD3A-201ENST00000584923 KDM5BQ9UGL1 1544 aa16.98■□□□□ 0.31
SNORD3A-201ENST00000584923 ZCCHC11Q5TAX3 1644 aaKnown RBP16.98■□□□□ 0.31
SNORD3A-201ENST00000584923 FHOD3Q2V2M9 1422 aa16.95■□□□□ 0.3
SNORD3A-201ENST00000584923 ASXL2Q76L83 1435 aa16.95■□□□□ 0.3
SNORD3A-201ENST00000584923 ARHGAP35Q9NRY4 1499 aa16.93■□□□□ 0.3
SNORD3A-201ENST00000584923 PPRC1Q5VV67 1664 aaKnown RBP16.91■□□□□ 0.3
SNORD3A-201ENST00000584923 GLI2P10070 1586 aa16.89■□□□□ 0.3
SNORD3A-201ENST00000584923 RAPGEF6Q8TEU7 1601 aa16.88■□□□□ 0.29
SNORD3A-201ENST00000584923 FMN1Q68DA7 1419 aa16.87■□□□□ 0.29
SNORD3A-201ENST00000584923 ATP10BO94823 1461 aa16.86■□□□□ 0.29
SNORD3A-201ENST00000584923 EPRSP07814 1512 aaKnown RBP16.86■□□□□ 0.29
SNORD3A-201ENST00000584923 MAP3K4Q9Y6R4 1608 aa16.85■□□□□ 0.29
SNORD3A-201ENST00000584923 CLIP1P30622 1438 aa16.84■□□□□ 0.29
SNORD3A-201ENST00000584923 NUP153P49790 1475 aaKnown RBP16.84■□□□□ 0.29
SNORD3A-201ENST00000584923 LOC105371045A0A1W2PR82 267 aa16.83■□□□□ 0.28
SNORD3A-201ENST00000584923 KDM6BO15054 1643 aa16.82■□□□□ 0.28
SNORD3A-201ENST00000584923 WDR7Q9Y4E6 1490 aa16.82■□□□□ 0.28
SNORD3A-201ENST00000584923 ARID3CA6NKF2 412 aa16.79■□□□□ 0.28
SNORD3A-201ENST00000584923 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.78■□□□□ 0.28
SNORD3A-201ENST00000584923 HNRNPUL2Q1KMD3 747 aaKnown RBP16.78■□□□□ 0.28
SNORD3A-201ENST00000584923 CEP162Q5TB80 1403 aa16.76■□□□□ 0.27
SNORD3A-201ENST00000584923 CFAP43Q8NDM7 1665 aa16.75■□□□□ 0.27
SNORD3A-201ENST00000584923 PLEKHD1A6NEE1 506 aa16.75■□□□□ 0.27
SNORD3A-201ENST00000584923 KCNH8Q96L42 1107 aa16.75■□□□□ 0.27
SNORD3A-201ENST00000584923 CASKIN1Q8WXD9 1431 aa16.74■□□□□ 0.27
SNORD3A-201ENST00000584923 ATP1B4Q9UN42 357 aaPredicted RBP16.74■□□□□ 0.27
SNORD3A-201ENST00000584923 HECW1Q76N89 1606 aa16.74■□□□□ 0.27
SNORD3A-201ENST00000584923 COL17A1Q9UMD9 1497 aaPredicted RBP16.72■□□□□ 0.27
SNORD3A-201ENST00000584923 CDK11AQ9UQ88 783 aaPredicted RBP16.7■□□□□ 0.26
SNORD3A-201ENST00000584923 CDK13Q14004 1512 aaKnown RBP16.69■□□□□ 0.26
SNORD3A-201ENST00000584923 TEX14Q8IWB6 1497 aa16.68■□□□□ 0.26
SNORD3A-201ENST00000584923 FYCO1Q9BQS8 1478 aa16.68■□□□□ 0.26
SNORD3A-201ENST00000584923 CD109Q6YHK3 1445 aa16.68■□□□□ 0.26
SNORD3A-201ENST00000584923 PCF11O94913 1555 aaKnown RBP16.68■□□□□ 0.26
SNORD3A-201ENST00000584923 MAGI3Q5TCQ9 1506 aa16.67■□□□□ 0.26
SNORD3A-201ENST00000584923 ABCA9Q8IUA7 1624 aa16.67■□□□□ 0.26
SNORD3A-201ENST00000584923 CCDC18Q5T9S5 1454 aa16.66■□□□□ 0.26
SNORD3A-201ENST00000584923 LRRIQ1Q96JM4 1722 aa16.65■□□□□ 0.26
SNORD3A-201ENST00000584923 TROQ12816 1431 aaPredicted RBP16.61■□□□□ 0.25
SNORD3A-201ENST00000584923 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.59■□□□□ 0.25
SNORD3A-201ENST00000584923 PHLDB1Q86UU1 1377 aa16.58■□□□□ 0.24
SNORD3A-201ENST00000584923 VPS8Q8N3P4 1428 aa16.57■□□□□ 0.24
SNORD3A-201ENST00000584923 TTC37Q6PGP7 1564 aa16.55■□□□□ 0.24
SNORD3A-201ENST00000584923 ARAP3Q8WWN8 1544 aa16.54■□□□□ 0.24
SNORD3A-201ENST00000584923 NEO1Q92859 1461 aa16.54■□□□□ 0.24
SNORD3A-201ENST00000584923 KIF14Q15058 1648 aa16.53■□□□□ 0.24
SNORD3A-201ENST00000584923 KDM4FA0A1W2PPD8 638 aa16.53■□□□□ 0.24
SNORD3A-201ENST00000584923 PLCH2O75038 1416 aa16.53■□□□□ 0.24
SNORD3A-201ENST00000584923 FRMPD1Q5SYB0 1578 aa16.49■□□□□ 0.23
SNORD3A-201ENST00000584923 MTUS2Q5JR59 1369 aa16.49■□□□□ 0.23
SNORD3A-201ENST00000584923 FANCAO15360 1455 aa16.48■□□□□ 0.23
SNORD3A-201ENST00000584923 EFCAB2Q5VUJ9 269 aa16.48■□□□□ 0.23
SNORD3A-201ENST00000584923 AKNAQ7Z591 1439 aa16.47■□□□□ 0.23
SNORD3A-201ENST00000584923 MAP3K1Q13233 1512 aa16.47■□□□□ 0.23
SNORD3A-201ENST00000584923 MYO5CQ9NQX4 1742 aa16.47■□□□□ 0.23
SNORD3A-201ENST00000584923 ADGRL1O94910 1474 aa16.47■□□□□ 0.23
SNORD3A-201ENST00000584923 CFAP74Q9C0B2 1584 aa16.47■□□□□ 0.23
SNORD3A-201ENST00000584923 RICTORQ6R327 1708 aa16.46■□□□□ 0.23
SNORD3A-201ENST00000584923 TIAM1Q13009 1591 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 985 ms