RNA–Protein interactions for RNA: ENST00000584717.1

CCDC57-219, Transcript of coiled-coil domain containing 57, humanhuman

TSL 2

Gene CCDC57, Length 513 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-219ENST00000584717 KIF13AQ9H1H9 1805 aa29.22■■■□□ 2.27
CCDC57-219ENST00000584717 KIF27Q86VH2 1401 aa29.16■■■□□ 2.26
CCDC57-219ENST00000584717 IGF1RP08069 1367 aa29.15■■■□□ 2.26
CCDC57-219ENST00000584717 CUL7Q14999 1698 aa29.14■■■□□ 2.26
CCDC57-219ENST00000584717 KIAA0586Q9BVV6 1533 aa29.11■■■□□ 2.25
CCDC57-219ENST00000584717 ADCY10Q96PN6 1610 aa29.09■■■□□ 2.25
CCDC57-219ENST00000584717 NPM1P06748 294 aaKnown RBP eCLIP29.06■■■□□ 2.24
CCDC57-219ENST00000584717 MAPKBP1O60336 1514 aa29.04■■■□□ 2.24
CCDC57-219ENST00000584717 ABCC10Q5T3U5 1492 aa29.04■■■□□ 2.24
CCDC57-219ENST00000584717 FAM69CQ0P6D2 419 aa29.02■■■□□ 2.24
CCDC57-219ENST00000584717 DIP2BQ9P265 1576 aa29■■■□□ 2.23
CCDC57-219ENST00000584717 CARMIL1Q5VZK9 1371 aa28.97■■■□□ 2.23
CCDC57-219ENST00000584717 TTBK1Q5TCY1 1321 aaPredicted RBP28.91■■■□□ 2.22
CCDC57-219ENST00000584717 PTPRGP23470 1445 aa28.88■■■□□ 2.21
CCDC57-219ENST00000584717 IQGAP2Q13576 1575 aa28.85■■■□□ 2.21
CCDC57-219ENST00000584717 CARMIL2Q6F5E8 1435 aa28.83■■■□□ 2.21
CCDC57-219ENST00000584717 TSPOAP1O95153 1857 aa28.83■■■□□ 2.2
CCDC57-219ENST00000584717 TNIKQ9UKE5 1360 aa28.82■■■□□ 2.2
CCDC57-219ENST00000584717 KDM6BO15054 1643 aa28.78■■■□□ 2.2
CCDC57-219ENST00000584717 ABCC2Q92887 1545 aa28.76■■■□□ 2.19
CCDC57-219ENST00000584717 DISP1Q96F81 1524 aa28.72■■■□□ 2.19
CCDC57-219ENST00000584717 RAPGEF2Q9Y4G8 1499 aa28.69■■■□□ 2.18
CCDC57-219ENST00000584717 ASXL2Q76L83 1435 aa28.69■■■□□ 2.18
CCDC57-219ENST00000584717 UHRF1BP1LA0JNW5 1464 aa28.67■■■□□ 2.18
CCDC57-219ENST00000584717 UACAQ9BZF9 1416 aa28.66■■■□□ 2.18
CCDC57-219ENST00000584717 PLB1Q6P1J6 1458 aa28.65■■■□□ 2.18
CCDC57-219ENST00000584717 UGGT2Q9NYU1 1516 aa28.64■■■□□ 2.18
CCDC57-219ENST00000584717 GLI2P10070 1586 aa28.6■■■□□ 2.17
CCDC57-219ENST00000584717 KIAA0556O60303 1618 aa28.6■■■□□ 2.17
CCDC57-219ENST00000584717 PPRC1Q5VV67 1664 aaKnown RBP28.6■■■□□ 2.17
CCDC57-219ENST00000584717 KDM5BQ9UGL1 1544 aa28.55■■■□□ 2.16
CCDC57-219ENST00000584717 ZCCHC11Q5TAX3 1644 aaKnown RBP28.54■■■□□ 2.16
CCDC57-219ENST00000584717 KDM4FA0A1W2PPD8 638 aa28.53■■■□□ 2.16
CCDC57-219ENST00000584717 CTTNBP2Q8WZ74 1663 aa28.51■■■□□ 2.16
CCDC57-219ENST00000584717 EPRSP07814 1512 aaKnown RBP28.51■■■□□ 2.15
CCDC57-219ENST00000584717 MAP3K4Q9Y6R4 1608 aa28.47■■■□□ 2.15
CCDC57-219ENST00000584717 COL17A1Q9UMD9 1497 aaPredicted RBP28.4■■■□□ 2.14
CCDC57-219ENST00000584717 GOLGA3Q08378 1498 aa28.39■■■□□ 2.13
CCDC57-219ENST00000584717 WDR7Q9Y4E6 1490 aa28.38■■■□□ 2.13
CCDC57-219ENST00000584717 TEX14Q8IWB6 1497 aa28.37■■■□□ 2.13
CCDC57-219ENST00000584717 PRXQ9BXM0 1461 aa28.36■■■□□ 2.13
CCDC57-219ENST00000584717 ABCA8O94911 1581 aa28.33■■■□□ 2.13
CCDC57-219ENST00000584717 ADGRL1O94910 1474 aa28.3■■■□□ 2.12
CCDC57-219ENST00000584717 KCNH8Q96L42 1107 aa28.24■■■□□ 2.11
CCDC57-219ENST00000584717 CFAP43Q8NDM7 1665 aa28.23■■■□□ 2.11
CCDC57-219ENST00000584717 CD109Q6YHK3 1445 aa28.21■■■□□ 2.11
CCDC57-219ENST00000584717 MAGI3Q5TCQ9 1506 aa28.18■■■□□ 2.1
CCDC57-219ENST00000584717 P3H3Q8IVL6 736 aa28.18■■■□□ 2.1
CCDC57-219ENST00000584717 ARID3CA6NKF2 412 aa28.16■■■□□ 2.1
CCDC57-219ENST00000584717 ATP10BO94823 1461 aa28.09■■■□□ 2.09
CCDC57-219ENST00000584717 CSRNP3Q8WYN3 585 aa28.09■■■□□ 2.09
CCDC57-219ENST00000584717 SAMD9Q5K651 1589 aa28.08■■■□□ 2.09
CCDC57-219ENST00000584717 FAM9AQ8IZU1 332 aaPredicted RBP28.08■■■□□ 2.09
CCDC57-219ENST00000584717 RAPGEF6Q8TEU7 1601 aa28.01■■■□□ 2.07
CCDC57-219ENST00000584717 KIF21BO75037 1637 aa27.99■■■□□ 2.07
CCDC57-219ENST00000584717 ABCA9Q8IUA7 1624 aa27.98■■■□□ 2.07
CCDC57-219ENST00000584717 HECW2Q9P2P5 1572 aa27.97■■■□□ 2.07
CCDC57-219ENST00000584717 ARAP3Q8WWN8 1544 aa27.97■■■□□ 2.07
CCDC57-219ENST00000584717 RANGAP1P46060 587 aaPredicted RBP27.96■■■□□ 2.07
CCDC57-219ENST00000584717 EEA1Q15075 1411 aa27.92■■■□□ 2.06
CCDC57-219ENST00000584717 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.92■■■□□ 2.06
CCDC57-219ENST00000584717 HNRNPUL2Q1KMD3 747 aaKnown RBP27.92■■■□□ 2.06
CCDC57-219ENST00000584717 FHOD3Q2V2M9 1422 aa27.91■■■□□ 2.06
CCDC57-219ENST00000584717 NUP153P49790 1475 aaKnown RBP27.9■■■□□ 2.06
CCDC57-219ENST00000584717 PHLDB1Q86UU1 1377 aa27.86■■■□□ 2.05
CCDC57-219ENST00000584717 NEO1Q92859 1461 aa27.83■■■□□ 2.05
CCDC57-219ENST00000584717 ILDR1Q86SU0 546 aaPredicted RBP27.83■■■□□ 2.05
CCDC57-219ENST00000584717 RAPGEF3O95398 923 aa27.82■■■□□ 2.04
CCDC57-219ENST00000584717 FRMPD1Q5SYB0 1578 aa27.78■■■□□ 2.04
CCDC57-219ENST00000584717 EFCAB5A4FU69 1503 aa27.75■■■□□ 2.03
CCDC57-219ENST00000584717 PLEKHD1A6NEE1 506 aa27.73■■■□□ 2.03
CCDC57-219ENST00000584717 ADAMTSL3P82987 1691 aa27.72■■■□□ 2.03
CCDC57-219ENST00000584717 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP27.68■■■□□ 2.02
CCDC57-219ENST00000584717 PTPRMP28827 1452 aa27.68■■■□□ 2.02
CCDC57-219ENST00000584717 TTC37Q6PGP7 1564 aa27.67■■■□□ 2.02
CCDC57-219ENST00000584717 BCORL1Q5H9F3 1711 aa27.67■■■□□ 2.02
CCDC57-219ENST00000584717 RICTORQ6R327 1708 aa27.66■■■□□ 2.02
CCDC57-219ENST00000584717 CDK13Q14004 1512 aaKnown RBP27.66■■■□□ 2.02
CCDC57-219ENST00000584717 ARID4BQ4LE39 1312 aaPredicted RBP27.66■■■□□ 2.02
CCDC57-219ENST00000584717 FANCAO15360 1455 aa27.65■■■□□ 2.02
CCDC57-219ENST00000584717 DENND4BO75064 1496 aaPredicted RBP27.65■■■□□ 2.02
CCDC57-219ENST00000584717 EHMT2Q96KQ7 1210 aa27.65■■■□□ 2.02
CCDC57-219ENST00000584717 AKNAQ7Z591 1439 aa27.65■■■□□ 2.02
CCDC57-219ENST00000584717 CFAP74Q9C0B2 1584 aa27.65■■■□□ 2.02
CCDC57-219ENST00000584717 ARHGEF40Q8TER5 1519 aa27.64■■■□□ 2.02
CCDC57-219ENST00000584717 MADDQ8WXG6 1647 aa27.63■■■□□ 2.01
CCDC57-219ENST00000584717 UBTFP17480 764 aaKnown RBP27.56■■■□□ 2
CCDC57-219ENST00000584717 RIMS1Q86UR5 1692 aaKnown RBP27.53■■■□□ 2
CCDC57-219ENST00000584717 ZMYM4Q5VZL5 1548 aa27.53■■■□□ 2
CCDC57-219ENST00000584717 ATP1B4Q9UN42 357 aaPredicted RBP27.53■■■□□ 2
CCDC57-219ENST00000584717 HECW1Q76N89 1606 aa27.52■■■□□ 2
CCDC57-219ENST00000584717 ZFYVE16Q7Z3T8 1539 aa27.51■■□□□ 1.99
CCDC57-219ENST00000584717 ARHGAP35Q9NRY4 1499 aa27.51■■□□□ 1.99
CCDC57-219ENST00000584717 YEATS2Q9ULM3 1422 aa27.5■■□□□ 1.99
CCDC57-219ENST00000584717 FMN1Q68DA7 1419 aa27.5■■□□□ 1.99
CCDC57-219ENST00000584717 SIGLEC1Q9BZZ2 1709 aa27.48■■□□□ 1.99
CCDC57-219ENST00000584717 PLCH2O75038 1416 aa27.47■■□□□ 1.99
CCDC57-219ENST00000584717 PCF11O94913 1555 aaKnown RBP27.47■■□□□ 1.99
CCDC57-219ENST00000584717 SCAPERQ9BY12 1400 aa27.45■■□□□ 1.98
CCDC57-219ENST00000584717 CHIC1Q5VXU3 224 aa27.44■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms