RNA–Protein interactions for RNA: ENST00000584632.5

CDK12-209, Transcript of cyclin dependent kinase 12, humanhuman

TSL 5

Gene CDK12, Length 4,165 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK12-209ENST00000584632 HNRNPUQ00839 825 aaKnown RBP eCLIP18.7■□□□□ 0.58
CDK12-209ENST00000584632 PEG3Q9GZU2 1588 aa18.7■□□□□ 0.58
CDK12-209ENST00000584632 TOP2BQ02880 1626 aa18.69■□□□□ 0.58
CDK12-209ENST00000584632 FHAD1B1AJZ9 1412 aa18.68■□□□□ 0.58
CDK12-209ENST00000584632 RBM19Q9Y4C8 960 aaKnown RBP18.67■□□□□ 0.58
CDK12-209ENST00000584632 PPP1R15AO75807 674 aaPredicted RBP18.63■□□□□ 0.57
CDK12-209ENST00000584632 CARMIL1Q5VZK9 1371 aa18.62■□□□□ 0.57
CDK12-209ENST00000584632 CUX2O14529 1486 aa18.61■□□□□ 0.57
CDK12-209ENST00000584632 UNC13AQ9UPW8 1703 aa18.6■□□□□ 0.57
CDK12-209ENST00000584632 ARHGAP35Q9NRY4 1499 aa18.57■□□□□ 0.56
CDK12-209ENST00000584632 BCL11AQ9H165 835 aa18.56■□□□□ 0.56
CDK12-209ENST00000584632 MTUS2Q5JR59 1369 aa18.55■□□□□ 0.56
CDK12-209ENST00000584632 BICRAQ9NZM4 1560 aa18.55■□□□□ 0.56
CDK12-209ENST00000584632 MYT1LQ9UL68 1186 aa18.55■□□□□ 0.56
CDK12-209ENST00000584632 IRX6P78412 446 aaPredicted RBP18.51■□□□□ 0.55
CDK12-209ENST00000584632 EIF4G2P78344 907 aaKnown RBP eCLIP18.49■□□□□ 0.55
CDK12-209ENST00000584632 LRRC9Q6ZRR7 1453 aa18.48■□□□□ 0.55
CDK12-209ENST00000584632 BIVM-ERCC5R4GMW8 1640 aa18.47■□□□□ 0.55
CDK12-209ENST00000584632 IGF1RP08069 1367 aa18.47■□□□□ 0.55
CDK12-209ENST00000584632 PHLDB1Q86UU1 1377 aa18.47■□□□□ 0.55
CDK12-209ENST00000584632 ERICH6BQ5W0A0 696 aa18.45■□□□□ 0.54
CDK12-209ENST00000584632 FAM9BQ8IZU0 186 aa18.45■□□□□ 0.54
CDK12-209ENST00000584632 POLR3GLQ9BT43 218 aa18.45■□□□□ 0.54
CDK12-209ENST00000584632 PPP4R2Q9NY27 417 aa18.45■□□□□ 0.54
CDK12-209ENST00000584632 CUX1P39880 1505 aa18.44■□□□□ 0.54
CDK12-209ENST00000584632 TIAM1Q13009 1591 aa18.43■□□□□ 0.54
CDK12-209ENST00000584632 WDR97A6NE52 1622 aa18.43■□□□□ 0.54
CDK12-209ENST00000584632 MRS2Q9HD23 443 aa18.42■□□□□ 0.54
CDK12-209ENST00000584632 MAP3K1Q13233 1512 aa18.41■□□□□ 0.54
CDK12-209ENST00000584632 NCAPD3P42695 1498 aa18.41■□□□□ 0.54
CDK12-209ENST00000584632 RTL5Q5HYW3 569 aaPredicted RBP18.41■□□□□ 0.54
CDK12-209ENST00000584632 CNGB1Q14028 1251 aaPredicted RBP18.4■□□□□ 0.54
CDK12-209ENST00000584632 CHIC2Q9UKJ5 165 aa18.38■□□□□ 0.53
CDK12-209ENST00000584632 MAPKBP1O60336 1514 aa18.38■□□□□ 0.53
CDK12-209ENST00000584632 RRP7BPQ9NSQ0 103 aa18.36■□□□□ 0.53
CDK12-209ENST00000584632 CFTRP13569 1480 aa18.36■□□□□ 0.53
CDK12-209ENST00000584632 FHOD3Q2V2M9 1422 aa18.35■□□□□ 0.53
CDK12-209ENST00000584632 FMN1Q68DA7 1419 aa18.35■□□□□ 0.53
CDK12-209ENST00000584632 ANP32AP39687 249 aaKnown RBP18.35■□□□□ 0.53
CDK12-209ENST00000584632 FANCIQ9NVI1 1328 aa18.35■□□□□ 0.53
CDK12-209ENST00000584632 HSPA5P11021 654 aaKnown RBP18.34■□□□□ 0.53
CDK12-209ENST00000584632 CCDC18Q5T9S5 1454 aa18.32■□□□□ 0.52
CDK12-209ENST00000584632 HMGXB3Q12766 1538 aa18.32■□□□□ 0.52
CDK12-209ENST00000584632 CADPSQ9ULU8 1353 aa18.31■□□□□ 0.52
CDK12-209ENST00000584632 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.3■□□□□ 0.523e-8■■■□□ 15.1
CDK12-209ENST00000584632 UACAQ9BZF9 1416 aa18.29■□□□□ 0.52
CDK12-209ENST00000584632 CCDC136Q96JN2 1154 aa18.28■□□□□ 0.52
CDK12-209ENST00000584632 FGD6Q6ZV73 1430 aa18.27■□□□□ 0.52
CDK12-209ENST00000584632 FGD5Q6ZNL6 1462 aa18.26■□□□□ 0.51
CDK12-209ENST00000584632 B4GALNT3Q6L9W6 998 aa18.26■□□□□ 0.51
CDK12-209ENST00000584632 CASKIN1Q8WXD9 1431 aa18.25■□□□□ 0.51
CDK12-209ENST00000584632 FYCO1Q9BQS8 1478 aa18.24■□□□□ 0.51
CDK12-209ENST00000584632 ZNF326Q5BKZ1 582 aaKnown RBP18.24■□□□□ 0.51
CDK12-209ENST00000584632 NBR1Q14596 966 aa18.2■□□□□ 0.5
CDK12-209ENST00000584632 ZBTB47Q9UFB7 747 aaPredicted RBP18.2■□□□□ 0.5
CDK12-209ENST00000584632 NOP58Q9Y2X3 529 aaKnown RBP18.2■□□□□ 0.5
CDK12-209ENST00000584632 ARID3CA6NKF2 412 aa18.18■□□□□ 0.5
CDK12-209ENST00000584632 HFM1A2PYH4 1435 aa18.18■□□□□ 0.5
CDK12-209ENST00000584632 SLC4A1APQ9BWU0 796 aaKnown RBP18.17■□□□□ 0.5
CDK12-209ENST00000584632 TMC1Q8TDI8 760 aa18.17■□□□□ 0.5
CDK12-209ENST00000584632 EFCAB5A4FU69 1503 aa18.17■□□□□ 0.5
CDK12-209ENST00000584632 MPHOSPH9Q99550 1183 aa18.16■□□□□ 0.5
CDK12-209ENST00000584632 PRKRIP1Q9H875 184 aaPredicted RBP18.16■□□□□ 0.5
CDK12-209ENST00000584632 PCF11O94913 1555 aaKnown RBP18.15■□□□□ 0.5
CDK12-209ENST00000584632 WASHC2AQ641Q2 1341 aa18.15■□□□□ 0.5
CDK12-209ENST00000584632 ZBED9Q6R2W3 1325 aa18.15■□□□□ 0.5
CDK12-209ENST00000584632 L3MBTL2Q969R5 705 aa18.15■□□□□ 0.5
CDK12-209ENST00000584632 DAXXQ9UER7 740 aaPredicted RBP18.14■□□□□ 0.49
CDK12-209ENST00000584632 MYOM3Q5VTT5 1437 aa18.14■□□□□ 0.49
CDK12-209ENST00000584632 DEKP35659 375 aaKnown RBP18.13■□□□□ 0.49
CDK12-209ENST00000584632 MSH5O43196 834 aa18.12■□□□□ 0.49
CDK12-209ENST00000584632 AQRO60306 1485 aaKnown RBP eCLIP18.11■□□□□ 0.494e-7■■■■□ 24
CDK12-209ENST00000584632 CNTLNQ9NXG0 1405 aa18.11■□□□□ 0.49
CDK12-209ENST00000584632 FANCD2Q9BXW9 1451 aa18.09■□□□□ 0.49
CDK12-209ENST00000584632 NPM2Q86SE8 214 aaKnown RBP18.08■□□□□ 0.48
CDK12-209ENST00000584632 NCOA2Q15596 1464 aa18.07■□□□□ 0.48
CDK12-209ENST00000584632 NAIPQ13075 1403 aa18.07■□□□□ 0.48
CDK12-209ENST00000584632 FOXD1Q16676 465 aa18.06■□□□□ 0.48
CDK12-209ENST00000584632 CCDC7Q96M83 1385 aa18.06■□□□□ 0.48
CDK12-209ENST00000584632 RAD54L2Q9Y4B4 1467 aa18.04■□□□□ 0.48
CDK12-209ENST00000584632 NUDCQ9Y266 331 aa18.04■□□□□ 0.48
CDK12-209ENST00000584632 CFAP43Q8NDM7 1665 aa18.04■□□□□ 0.48
CDK12-209ENST00000584632 ZNF777Q9ULD5 760 aaPredicted RBP18.01■□□□□ 0.47
CDK12-209ENST00000584632 TDRD9Q8NDG6 1382 aaKnown RBP18.01■□□□□ 0.47
CDK12-209ENST00000584632 PTPN23Q9H3S7 1636 aa17.99■□□□□ 0.47
CDK12-209ENST00000584632 IPO9Q96P70 1041 aaKnown RBP17.98■□□□□ 0.47
CDK12-209ENST00000584632 CCDC184Q52MB2 194 aa17.97■□□□□ 0.47
CDK12-209ENST00000584632 EHBP1L1Q8N3D4 1523 aa17.96■□□□□ 0.47
CDK12-209ENST00000584632 KIF7Q2M1P5 1343 aa17.95■□□□□ 0.46
CDK12-209ENST00000584632 ABCA10Q8WWZ4 1543 aa17.95■□□□□ 0.46
CDK12-209ENST00000584632 SALL2Q9Y467 1007 aaPredicted RBP17.94■□□□□ 0.46
CDK12-209ENST00000584632 PTPRKQ15262 1439 aa17.94■□□□□ 0.46
CDK12-209ENST00000584632 CARD11Q9BXL7 1154 aa17.93■□□□□ 0.46
CDK12-209ENST00000584632 SUPT6HQ7KZ85 1726 aaKnown RBP17.93■□□□□ 0.46
CDK12-209ENST00000584632 SENP3-EIF4A1A0A087X0R7 540 aa17.92■□□□□ 0.46
CDK12-209ENST00000584632 CFDP1Q9UEE9 299 aaPredicted RBP17.92■□□□□ 0.46
CDK12-209ENST00000584632 POLA1P09884 1462 aaPredicted RBP17.92■□□□□ 0.46
CDK12-209ENST00000584632 KDM2AQ9Y2K7 1162 aa17.91■□□□□ 0.46
CDK12-209ENST00000584632 CUL7Q14999 1698 aa17.9■□□□□ 0.46
CDK12-209ENST00000584632 DNMBPQ6XZF7 1577 aa17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms