RNA–Protein interactions for RNA: ENST00000584313.5

CLTC-213, Transcript of clathrin heavy chain, humanhuman

TSL 3

Gene CLTC, Length 715 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTC-213ENST00000584313 RUSC2Q8N2Y8 1516 aa24.42■■□□□ 1.5
CLTC-213ENST00000584313 PRG4Q92954 1404 aaPredicted RBP24.41■■□□□ 1.5
CLTC-213ENST00000584313 KIAA0586Q9BVV6 1533 aa24.39■■□□□ 1.49
CLTC-213ENST00000584313 RAPGEF2Q9Y4G8 1499 aa24.31■■□□□ 1.48
CLTC-213ENST00000584313 TRHP20396 242 aaPredicted RBP24.26■■□□□ 1.47
CLTC-213ENST00000584313 IQGAP2Q13576 1575 aa24.19■■□□□ 1.46
CLTC-213ENST00000584313 PRXQ9BXM0 1461 aa24.19■■□□□ 1.46
CLTC-213ENST00000584313 CARMIL2Q6F5E8 1435 aa24.14■■□□□ 1.45
CLTC-213ENST00000584313 CSRNP3Q8WYN3 585 aa24.14■■□□□ 1.45
CLTC-213ENST00000584313 CHIC1Q5VXU3 224 aa24.11■■□□□ 1.45
CLTC-213ENST00000584313 PTPRGP23470 1445 aa24.1■■□□□ 1.45
CLTC-213ENST00000584313 EEA1Q15075 1411 aa24.1■■□□□ 1.45
CLTC-213ENST00000584313 TNIKQ9UKE5 1360 aa24.09■■□□□ 1.45
CLTC-213ENST00000584313 DISP1Q96F81 1524 aa24.07■■□□□ 1.44
CLTC-213ENST00000584313 UGGT2Q9NYU1 1516 aa24.07■■□□□ 1.44
CLTC-213ENST00000584313 TTBK1Q5TCY1 1321 aaPredicted RBP24.06■■□□□ 1.44
CLTC-213ENST00000584313 NPM1P06748 294 aaKnown RBP eCLIP24.03■■□□□ 1.44
CLTC-213ENST00000584313 FAM9AQ8IZU1 332 aaPredicted RBP24.03■■□□□ 1.44
CLTC-213ENST00000584313 ADCY10Q96PN6 1610 aa24.01■■□□□ 1.43
CLTC-213ENST00000584313 CTTNBP2Q8WZ74 1663 aa23.97■■□□□ 1.43
CLTC-213ENST00000584313 KIAA0556O60303 1618 aa23.95■■□□□ 1.43
CLTC-213ENST00000584313 GOLGA3Q08378 1498 aa23.93■■□□□ 1.42
CLTC-213ENST00000584313 UACAQ9BZF9 1416 aa23.92■■□□□ 1.42
CLTC-213ENST00000584313 MAPKBP1O60336 1514 aa23.91■■□□□ 1.42
CLTC-213ENST00000584313 UHRF1BP1LA0JNW5 1464 aa23.89■■□□□ 1.42
CLTC-213ENST00000584313 ABCC2Q92887 1545 aa23.89■■□□□ 1.41
CLTC-213ENST00000584313 ABCC10Q5T3U5 1492 aa23.85■■□□□ 1.41
CLTC-213ENST00000584313 FAM69CQ0P6D2 419 aa23.84■■□□□ 1.41
CLTC-213ENST00000584313 KIF21BO75037 1637 aa23.81■■□□□ 1.4
CLTC-213ENST00000584313 P3H3Q8IVL6 736 aa23.8■■□□□ 1.4
CLTC-213ENST00000584313 PLB1Q6P1J6 1458 aa23.79■■□□□ 1.4
CLTC-213ENST00000584313 KDM5BQ9UGL1 1544 aa23.78■■□□□ 1.4
CLTC-213ENST00000584313 ASXL2Q76L83 1435 aa23.77■■□□□ 1.4
CLTC-213ENST00000584313 DIP2BQ9P265 1576 aa23.77■■□□□ 1.4
CLTC-213ENST00000584313 KIF13AQ9H1H9 1805 aa23.77■■□□□ 1.4
CLTC-213ENST00000584313 RANGAP1P46060 587 aaPredicted RBP23.75■■□□□ 1.39
CLTC-213ENST00000584313 EHMT2Q96KQ7 1210 aa23.74■■□□□ 1.39
CLTC-213ENST00000584313 SAMD9Q5K651 1589 aa23.73■■□□□ 1.39
CLTC-213ENST00000584313 ABCA8O94911 1581 aa23.72■■□□□ 1.39
CLTC-213ENST00000584313 UBTFP17480 764 aaKnown RBP23.7■■□□□ 1.38
CLTC-213ENST00000584313 ZCCHC11Q5TAX3 1644 aaKnown RBP23.68■■□□□ 1.38
CLTC-213ENST00000584313 FHOD3Q2V2M9 1422 aa23.63■■□□□ 1.37
CLTC-213ENST00000584313 EPRSP07814 1512 aaKnown RBP23.62■■□□□ 1.37
CLTC-213ENST00000584313 WDR7Q9Y4E6 1490 aa23.61■■□□□ 1.37
CLTC-213ENST00000584313 GLI2P10070 1586 aa23.61■■□□□ 1.37
CLTC-213ENST00000584313 EFCAB5A4FU69 1503 aa23.59■■□□□ 1.37
CLTC-213ENST00000584313 ARID3CA6NKF2 412 aa23.59■■□□□ 1.37
CLTC-213ENST00000584313 ATP10BO94823 1461 aa23.56■■□□□ 1.36
CLTC-213ENST00000584313 RAPGEF6Q8TEU7 1601 aa23.53■■□□□ 1.36
CLTC-213ENST00000584313 KCNH8Q96L42 1107 aa23.53■■□□□ 1.36
CLTC-213ENST00000584313 NUP153P49790 1475 aaKnown RBP23.5■■□□□ 1.35
CLTC-213ENST00000584313 TSPOAP1O95153 1857 aa23.5■■□□□ 1.35
CLTC-213ENST00000584313 ARHGAP35Q9NRY4 1499 aa23.48■■□□□ 1.35
CLTC-213ENST00000584313 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.47■■□□□ 1.35
CLTC-213ENST00000584313 HNRNPUL2Q1KMD3 747 aaKnown RBP23.47■■□□□ 1.35
CLTC-213ENST00000584313 MAP3K4Q9Y6R4 1608 aa23.46■■□□□ 1.35
CLTC-213ENST00000584313 PPRC1Q5VV67 1664 aaKnown RBP23.44■■□□□ 1.34
CLTC-213ENST00000584313 KDM6BO15054 1643 aa23.43■■□□□ 1.34
CLTC-213ENST00000584313 CD109Q6YHK3 1445 aa23.42■■□□□ 1.34
CLTC-213ENST00000584313 TEX14Q8IWB6 1497 aa23.42■■□□□ 1.34
CLTC-213ENST00000584313 FMN1Q68DA7 1419 aa23.42■■□□□ 1.34
CLTC-213ENST00000584313 MAGI3Q5TCQ9 1506 aa23.37■■□□□ 1.33
CLTC-213ENST00000584313 PLEKHD1A6NEE1 506 aa23.36■■□□□ 1.33
CLTC-213ENST00000584313 CFAP43Q8NDM7 1665 aa23.35■■□□□ 1.33
CLTC-213ENST00000584313 ATP1B4Q9UN42 357 aaPredicted RBP23.34■■□□□ 1.33
CLTC-213ENST00000584313 COL17A1Q9UMD9 1497 aaPredicted RBP23.34■■□□□ 1.33
CLTC-213ENST00000584313 CDK13Q14004 1512 aaKnown RBP23.3■■□□□ 1.32
CLTC-213ENST00000584313 CLIP1P30622 1438 aa23.29■■□□□ 1.32
CLTC-213ENST00000584313 ABCA9Q8IUA7 1624 aa23.29■■□□□ 1.32
CLTC-213ENST00000584313 HECW1Q76N89 1606 aa23.27■■□□□ 1.32
CLTC-213ENST00000584313 CDK11AQ9UQ88 783 aaPredicted RBP23.22■■□□□ 1.31
CLTC-213ENST00000584313 CASKIN1Q8WXD9 1431 aa23.22■■□□□ 1.31
CLTC-213ENST00000584313 PHLDB1Q86UU1 1377 aa23.2■■□□□ 1.3
CLTC-213ENST00000584313 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.18■■□□□ 1.3
CLTC-213ENST00000584313 ARAP3Q8WWN8 1544 aa23.18■■□□□ 1.3
CLTC-213ENST00000584313 AEBP2Q6ZN18 517 aaPredicted RBP23.17■■□□□ 1.3
CLTC-213ENST00000584313 NEO1Q92859 1461 aa23.17■■□□□ 1.3
CLTC-213ENST00000584313 PCF11O94913 1555 aaKnown RBP23.16■■□□□ 1.3
CLTC-213ENST00000584313 LOC105371045A0A1W2PR82 267 aa23.14■■□□□ 1.29
CLTC-213ENST00000584313 CEP162Q5TB80 1403 aa23.14■■□□□ 1.29
CLTC-213ENST00000584313 FYCO1Q9BQS8 1478 aa23.13■■□□□ 1.29
CLTC-213ENST00000584313 TROQ12816 1431 aaPredicted RBP23.13■■□□□ 1.29
CLTC-213ENST00000584313 TTC37Q6PGP7 1564 aa23.13■■□□□ 1.29
CLTC-213ENST00000584313 CCDC18Q5T9S5 1454 aa23.12■■□□□ 1.29
CLTC-213ENST00000584313 RAPGEF3O95398 923 aa23.09■■□□□ 1.29
CLTC-213ENST00000584313 FANCAO15360 1455 aa23.09■■□□□ 1.29
CLTC-213ENST00000584313 LRRIQ1Q96JM4 1722 aa23.08■■□□□ 1.28
CLTC-213ENST00000584313 KDM4FA0A1W2PPD8 638 aa23.07■■□□□ 1.28
CLTC-213ENST00000584313 PLCH2O75038 1416 aa23.07■■□□□ 1.28
CLTC-213ENST00000584313 AKNAQ7Z591 1439 aa23.07■■□□□ 1.28
CLTC-213ENST00000584313 KIF14Q15058 1648 aa23.04■■□□□ 1.28
CLTC-213ENST00000584313 DENND4BO75064 1496 aaPredicted RBP23.01■■□□□ 1.27
CLTC-213ENST00000584313 CFAP74Q9C0B2 1584 aa23.01■■□□□ 1.27
CLTC-213ENST00000584313 EFCAB2Q5VUJ9 269 aa23■■□□□ 1.27
CLTC-213ENST00000584313 FRMPD1Q5SYB0 1578 aa22.97■■□□□ 1.27
CLTC-213ENST00000584313 ADGRL1O94910 1474 aa22.97■■□□□ 1.27
CLTC-213ENST00000584313 SCAPERQ9BY12 1400 aa22.94■■□□□ 1.26
CLTC-213ENST00000584313 MYO5CQ9NQX4 1742 aa22.94■■□□□ 1.26
CLTC-213ENST00000584313 ARHGAP5Q13017 1502 aa22.92■■□□□ 1.26
CLTC-213ENST00000584313 POGZQ7Z3K3 1410 aa22.9■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms