RNA–Protein interactions for RNA: ENST00000583818.1

TSEN54-211, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

TSL 5

Gene TSEN54, Length 765 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-211ENST00000583818 JPH4Q96JJ6 628 aa28.51■■■□□ 2.15
TSEN54-211ENST00000583818 PRG4Q92954 1404 aaPredicted RBP28.51■■■□□ 2.15
TSEN54-211ENST00000583818 KIAA0586Q9BVV6 1533 aa28.48■■■□□ 2.15
TSEN54-211ENST00000583818 RAPGEF2Q9Y4G8 1499 aa28.46■■■□□ 2.15
TSEN54-211ENST00000583818 CHIC1Q5VXU3 224 aa28.44■■■□□ 2.14
TSEN54-211ENST00000583818 FAM9AQ8IZU1 332 aaPredicted RBP28.36■■■□□ 2.13
TSEN54-211ENST00000583818 PRXQ9BXM0 1461 aa28.34■■■□□ 2.13
TSEN54-211ENST00000583818 IQGAP2Q13576 1575 aa28.34■■■□□ 2.13
TSEN54-211ENST00000583818 CSRNP3Q8WYN3 585 aa28.3■■■□□ 2.12
TSEN54-211ENST00000583818 TTBK1Q5TCY1 1321 aaPredicted RBP28.25■■■□□ 2.11
TSEN54-211ENST00000583818 CTTNBP2Q8WZ74 1663 aa28.23■■■□□ 2.11
TSEN54-211ENST00000583818 EEA1Q15075 1411 aa28.22■■■□□ 2.11
TSEN54-211ENST00000583818 TRHP20396 242 aaPredicted RBP28.2■■■□□ 2.1
TSEN54-211ENST00000583818 DISP1Q96F81 1524 aa28.17■■■□□ 2.1
TSEN54-211ENST00000583818 CARMIL2Q6F5E8 1435 aa28.17■■■□□ 2.1
TSEN54-211ENST00000583818 UGGT2Q9NYU1 1516 aa28.16■■■□□ 2.1
TSEN54-211ENST00000583818 PTPRGP23470 1445 aa28.12■■■□□ 2.09
TSEN54-211ENST00000583818 TNIKQ9UKE5 1360 aa28.11■■■□□ 2.09
TSEN54-211ENST00000583818 ADCY10Q96PN6 1610 aa28.1■■■□□ 2.09
TSEN54-211ENST00000583818 EHMT2Q96KQ7 1210 aa28.09■■■□□ 2.09
TSEN54-211ENST00000583818 KIAA0556O60303 1618 aa28.09■■■□□ 2.09
TSEN54-211ENST00000583818 KIF21BO75037 1637 aa28.02■■■□□ 2.08
TSEN54-211ENST00000583818 RANGAP1P46060 587 aaPredicted RBP27.98■■■□□ 2.07
TSEN54-211ENST00000583818 NPM1P06748 294 aaKnown RBP eCLIP27.96■■■□□ 2.07
TSEN54-211ENST00000583818 P3H3Q8IVL6 736 aa27.96■■■□□ 2.07
TSEN54-211ENST00000583818 GOLGA3Q08378 1498 aa27.95■■■□□ 2.07
TSEN54-211ENST00000583818 UACAQ9BZF9 1416 aa27.92■■■□□ 2.06
TSEN54-211ENST00000583818 ABCC2Q92887 1545 aa27.87■■■□□ 2.05
TSEN54-211ENST00000583818 PLB1Q6P1J6 1458 aa27.87■■■□□ 2.05
TSEN54-211ENST00000583818 UHRF1BP1LA0JNW5 1464 aa27.86■■■□□ 2.05
TSEN54-211ENST00000583818 MAPKBP1O60336 1514 aa27.86■■■□□ 2.05
TSEN54-211ENST00000583818 UBTFP17480 764 aaKnown RBP27.85■■■□□ 2.05
TSEN54-211ENST00000583818 SAMD9Q5K651 1589 aa27.85■■■□□ 2.05
TSEN54-211ENST00000583818 KIF13AQ9H1H9 1805 aa27.83■■■□□ 2.05
TSEN54-211ENST00000583818 ABCA8O94911 1581 aa27.77■■■□□ 2.04
TSEN54-211ENST00000583818 FAM69CQ0P6D2 419 aa27.77■■■□□ 2.04
TSEN54-211ENST00000583818 ABCC10Q5T3U5 1492 aa27.76■■■□□ 2.04
TSEN54-211ENST00000583818 ZCCHC11Q5TAX3 1644 aaKnown RBP27.76■■■□□ 2.03
TSEN54-211ENST00000583818 DIP2BQ9P265 1576 aa27.76■■■□□ 2.03
TSEN54-211ENST00000583818 FHOD3Q2V2M9 1422 aa27.75■■■□□ 2.03
TSEN54-211ENST00000583818 KDM5BQ9UGL1 1544 aa27.75■■■□□ 2.03
TSEN54-211ENST00000583818 ASXL2Q76L83 1435 aa27.74■■■□□ 2.03
TSEN54-211ENST00000583818 ARID3CA6NKF2 412 aa27.73■■■□□ 2.03
TSEN54-211ENST00000583818 EFCAB5A4FU69 1503 aa27.66■■■□□ 2.02
TSEN54-211ENST00000583818 RAPGEF6Q8TEU7 1601 aa27.63■■■□□ 2.01
TSEN54-211ENST00000583818 TSPOAP1O95153 1857 aa27.61■■■□□ 2.01
TSEN54-211ENST00000583818 ARHGAP35Q9NRY4 1499 aa27.59■■■□□ 2.01
TSEN54-211ENST00000583818 ATP10BO94823 1461 aa27.57■■■□□ 2
TSEN54-211ENST00000583818 EPRSP07814 1512 aaKnown RBP27.57■■■□□ 2
TSEN54-211ENST00000583818 WDR7Q9Y4E6 1490 aa27.55■■■□□ 2
TSEN54-211ENST00000583818 NUP153P49790 1475 aaKnown RBP27.53■■■□□ 2
TSEN54-211ENST00000583818 GLI2P10070 1586 aa27.52■■■□□ 2
TSEN54-211ENST00000583818 KCNH8Q96L42 1107 aa27.51■■□□□ 1.99
TSEN54-211ENST00000583818 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.49■■□□□ 1.99
TSEN54-211ENST00000583818 HNRNPUL2Q1KMD3 747 aaKnown RBP27.49■■□□□ 1.99
TSEN54-211ENST00000583818 PPRC1Q5VV67 1664 aaKnown RBP27.46■■□□□ 1.99
TSEN54-211ENST00000583818 MAP3K4Q9Y6R4 1608 aa27.44■■□□□ 1.98
TSEN54-211ENST00000583818 ATP1B4Q9UN42 357 aaPredicted RBP27.42■■□□□ 1.98
TSEN54-211ENST00000583818 FMN1Q68DA7 1419 aa27.4■■□□□ 1.98
TSEN54-211ENST00000583818 CDK13Q14004 1512 aaKnown RBP27.38■■□□□ 1.97
TSEN54-211ENST00000583818 CLIP1P30622 1438 aa27.38■■□□□ 1.97
TSEN54-211ENST00000583818 LOC105371045A0A1W2PR82 267 aa27.37■■□□□ 1.97
TSEN54-211ENST00000583818 KDM6BO15054 1643 aa27.34■■□□□ 1.97
TSEN54-211ENST00000583818 HECW1Q76N89 1606 aa27.33■■□□□ 1.97
TSEN54-211ENST00000583818 CD109Q6YHK3 1445 aa27.33■■□□□ 1.96
TSEN54-211ENST00000583818 CFAP43Q8NDM7 1665 aa27.31■■□□□ 1.96
TSEN54-211ENST00000583818 PCF11O94913 1555 aaKnown RBP27.3■■□□□ 1.96
TSEN54-211ENST00000583818 LRRIQ1Q96JM4 1722 aa27.27■■□□□ 1.96
TSEN54-211ENST00000583818 PLEKHD1A6NEE1 506 aa27.27■■□□□ 1.96
TSEN54-211ENST00000583818 TEX14Q8IWB6 1497 aa27.26■■□□□ 1.95
TSEN54-211ENST00000583818 ABCA9Q8IUA7 1624 aa27.25■■□□□ 1.95
TSEN54-211ENST00000583818 CEP162Q5TB80 1403 aa27.24■■□□□ 1.95
TSEN54-211ENST00000583818 COL17A1Q9UMD9 1497 aaPredicted RBP27.23■■□□□ 1.95
TSEN54-211ENST00000583818 MAGI3Q5TCQ9 1506 aa27.22■■□□□ 1.95
TSEN54-211ENST00000583818 CASKIN1Q8WXD9 1431 aa27.21■■□□□ 1.95
TSEN54-211ENST00000583818 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP27.16■■□□□ 1.94
TSEN54-211ENST00000583818 TTC37Q6PGP7 1564 aa27.15■■□□□ 1.94
TSEN54-211ENST00000583818 FYCO1Q9BQS8 1478 aa27.13■■□□□ 1.93
TSEN54-211ENST00000583818 KIF14Q15058 1648 aa27.1■■□□□ 1.93
TSEN54-211ENST00000583818 CDK11AQ9UQ88 783 aaPredicted RBP27.09■■□□□ 1.93
TSEN54-211ENST00000583818 CCDC18Q5T9S5 1454 aa27.08■■□□□ 1.93
TSEN54-211ENST00000583818 TROQ12816 1431 aaPredicted RBP27.07■■□□□ 1.92
TSEN54-211ENST00000583818 ARAP3Q8WWN8 1544 aa27■■□□□ 1.91
TSEN54-211ENST00000583818 NEO1Q92859 1461 aa27■■□□□ 1.91
TSEN54-211ENST00000583818 FANCAO15360 1455 aa26.99■■□□□ 1.91
TSEN54-211ENST00000583818 RAPGEF3O95398 923 aa26.97■■□□□ 1.91
TSEN54-211ENST00000583818 MYO5CQ9NQX4 1742 aa26.96■■□□□ 1.91
TSEN54-211ENST00000583818 PLCH2O75038 1416 aa26.95■■□□□ 1.9
TSEN54-211ENST00000583818 AKNAQ7Z591 1439 aa26.94■■□□□ 1.9
TSEN54-211ENST00000583818 PHLDB1Q86UU1 1377 aa26.93■■□□□ 1.9
TSEN54-211ENST00000583818 FRMPD1Q5SYB0 1578 aa26.91■■□□□ 1.9
TSEN54-211ENST00000583818 CFAP74Q9C0B2 1584 aa26.91■■□□□ 1.9
TSEN54-211ENST00000583818 VPS8Q8N3P4 1428 aa26.89■■□□□ 1.89
TSEN54-211ENST00000583818 ARHGAP5Q13017 1502 aa26.87■■□□□ 1.89
TSEN54-211ENST00000583818 DENND4BO75064 1496 aaPredicted RBP26.86■■□□□ 1.89
TSEN54-211ENST00000583818 ADGRL1O94910 1474 aa26.85■■□□□ 1.89
TSEN54-211ENST00000583818 CDC42BPBQ9Y5S2 1711 aa26.85■■□□□ 1.89
TSEN54-211ENST00000583818 MTUS2Q5JR59 1369 aa26.84■■□□□ 1.89
TSEN54-211ENST00000583818 RICTORQ6R327 1708 aa26.84■■□□□ 1.89
TSEN54-211ENST00000583818 EFCAB2Q5VUJ9 269 aa26.83■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms