RNA–Protein interactions for RNA: ENST00000583753.5

RNF43-207, Transcript of ring finger protein 43, humanhuman

TSL 2 BASIC

Gene RNF43, Length 3,560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-207ENST00000583753 SMARCA2P51531 1590 aa14.62□□□□□ -0.07
RNF43-207ENST00000583753 B4GALNT3Q6L9W6 998 aa14.62□□□□□ -0.07
RNF43-207ENST00000583753 RTL5Q5HYW3 569 aaPredicted RBP14.6□□□□□ -0.07
RNF43-207ENST00000583753 MRS2Q9HD23 443 aa14.6□□□□□ -0.07
RNF43-207ENST00000583753 BAZ1BQ9UIG0 1483 aaKnown RBP14.58□□□□□ -0.08
RNF43-207ENST00000583753 SMARCA4P51532 1647 aa14.55□□□□□ -0.08
RNF43-207ENST00000583753 KIF21BO75037 1637 aa14.52□□□□□ -0.09
RNF43-207ENST00000583753 SETD5Q9C0A6 1442 aa14.51□□□□□ -0.09
RNF43-207ENST00000583753 FOXD1Q16676 465 aa14.51□□□□□ -0.09
RNF43-207ENST00000583753 PPP1R15AO75807 674 aaPredicted RBP14.51□□□□□ -0.09
RNF43-207ENST00000583753 KIF27Q86VH2 1401 aa14.51□□□□□ -0.09
RNF43-207ENST00000583753 CCDC136Q96JN2 1154 aa14.49□□□□□ -0.09
RNF43-207ENST00000583753 MTUS2Q5JR59 1369 aa14.48□□□□□ -0.09
RNF43-207ENST00000583753 SYNJ1O43426 1573 aa14.47□□□□□ -0.09
RNF43-207ENST00000583753 EIF4G2P78344 907 aaKnown RBP eCLIP14.46□□□□□ -0.09
RNF43-207ENST00000583753 ANP32AP39687 249 aaKnown RBP14.46□□□□□ -0.09
RNF43-207ENST00000583753 CCER2I3L3R5 266 aa14.45□□□□□ -0.1
RNF43-207ENST00000583753 ZNF777Q9ULD5 760 aaPredicted RBP14.45□□□□□ -0.1
RNF43-207ENST00000583753 HSPA5P11021 654 aaKnown RBP14.44□□□□□ -0.1
RNF43-207ENST00000583753 RTN4Q9NQC3 1192 aaKnown RBP14.44□□□□□ -0.1
RNF43-207ENST00000583753 ARAP1Q96P48 1450 aa14.43□□□□□ -0.1
RNF43-207ENST00000583753 PPP4R2Q9NY27 417 aa14.42□□□□□ -0.1
RNF43-207ENST00000583753 DAXXQ9UER7 740 aaPredicted RBP14.42□□□□□ -0.1
RNF43-207ENST00000583753 DEKP35659 375 aaKnown RBP14.41□□□□□ -0.1
RNF43-207ENST00000583753 CUX2O14529 1486 aa14.41□□□□□ -0.1
RNF43-207ENST00000583753 MSH5O43196 834 aa14.39□□□□□ -0.11
RNF43-207ENST00000583753 ZBTB47Q9UFB7 747 aaPredicted RBP14.39□□□□□ -0.11
RNF43-207ENST00000583753 CARMIL1Q5VZK9 1371 aa14.39□□□□□ -0.11
RNF43-207ENST00000583753 KDM2AQ9Y2K7 1162 aa14.38□□□□□ -0.11
RNF43-207ENST00000583753 PHLDB1Q86UU1 1377 aa14.36□□□□□ -0.11
RNF43-207ENST00000583753 TMC1Q8TDI8 760 aa14.36□□□□□ -0.11
RNF43-207ENST00000583753 LAS1LQ9Y4W2 734 aaKnown RBP14.35□□□□□ -0.11
RNF43-207ENST00000583753 ATAD2BQ9ULI0 1458 aa14.34□□□□□ -0.11
RNF43-207ENST00000583753 CCDC184Q52MB2 194 aa14.34□□□□□ -0.11
RNF43-207ENST00000583753 NOP58Q9Y2X3 529 aaKnown RBP14.33□□□□□ -0.11
RNF43-207ENST00000583753 WDR97A6NE52 1622 aa14.33□□□□□ -0.12
RNF43-207ENST00000583753 FHOD3Q2V2M9 1422 aa14.33□□□□□ -0.12
RNF43-207ENST00000583753 SLC4A1APQ9BWU0 796 aaKnown RBP14.33□□□□□ -0.12
RNF43-207ENST00000583753 EIF4G1Q04637 1599 aaKnown RBP14.31□□□□□ -0.12
RNF43-207ENST00000583753 PRKCSHP14314 528 aaPredicted RBP14.29□□□□□ -0.12
RNF43-207ENST00000583753 FBLN2P98095 1184 aa14.29□□□□□ -0.12
RNF43-207ENST00000583753 RRBP1Q9P2E9 1410 aaKnown RBP14.28□□□□□ -0.12
RNF43-207ENST00000583753 L3MBTL2Q969R5 705 aa14.28□□□□□ -0.12
RNF43-207ENST00000583753 TIMELESSQ9UNS1 1208 aa14.28□□□□□ -0.12
RNF43-207ENST00000583753 ARHGAP35Q9NRY4 1499 aa14.26□□□□□ -0.13
RNF43-207ENST00000583753 EIF5BO60841 1220 aaKnown RBP14.26□□□□□ -0.13
RNF43-207ENST00000583753 FHAD1B1AJZ9 1412 aa14.23□□□□□ -0.13
RNF43-207ENST00000583753 WASHC2AQ641Q2 1341 aa14.23□□□□□ -0.13
RNF43-207ENST00000583753 PAK3O75914 559 aaPredicted RBP14.22□□□□□ -0.13
RNF43-207ENST00000583753 IGF1RP08069 1367 aa14.21□□□□□ -0.13
RNF43-207ENST00000583753 ARXQ96QS3 562 aa14.21□□□□□ -0.13
RNF43-207ENST00000583753 MPHOSPH9Q99550 1183 aa14.21□□□□□ -0.14
RNF43-207ENST00000583753 PRKRIP1Q9H875 184 aaPredicted RBP14.21□□□□□ -0.14
RNF43-207ENST00000583753 PRXQ9BXM0 1461 aa14.2□□□□□ -0.14
RNF43-207ENST00000583753 NEFMP07197 916 aa14.19□□□□□ -0.14
RNF43-207ENST00000583753 FANCIQ9NVI1 1328 aa14.19□□□□□ -0.14
RNF43-207ENST00000583753 RGL3Q3MIN7 710 aa14.18□□□□□ -0.14
RNF43-207ENST00000583753 LRRC9Q6ZRR7 1453 aa14.16□□□□□ -0.14
RNF43-207ENST00000583753 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.16□□□□□ -0.14
RNF43-207ENST00000583753 MYT1LQ9UL68 1186 aa14.16□□□□□ -0.14
RNF43-207ENST00000583753 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.15□□□□□ -0.147e-9■■□□□ 14.2
RNF43-207ENST00000583753 CCDC18Q5T9S5 1454 aa14.15□□□□□ -0.14
RNF43-207ENST00000583753 TDRD9Q8NDG6 1382 aaKnown RBP14.14□□□□□ -0.15
RNF43-207ENST00000583753 C11orf95C9JLR9 678 aaPredicted RBP14.14□□□□□ -0.15
RNF43-207ENST00000583753 CARD11Q9BXL7 1154 aa14.14□□□□□ -0.15
RNF43-207ENST00000583753 MAPKBP1O60336 1514 aa14.12□□□□□ -0.15
RNF43-207ENST00000583753 CC2D1BQ5T0F9 858 aaKnown RBP14.11□□□□□ -0.15
RNF43-207ENST00000583753 IPO9Q96P70 1041 aaKnown RBP14.09□□□□□ -0.15
RNF43-207ENST00000583753 SLC4A3P48751 1232 aa14.09□□□□□ -0.15
RNF43-207ENST00000583753 PLIN1O60240 522 aa14.09□□□□□ -0.15
RNF43-207ENST00000583753 NUDCQ9Y266 331 aa14.09□□□□□ -0.15
RNF43-207ENST00000583753 CUX1P39880 1505 aa14.08□□□□□ -0.16
RNF43-207ENST00000583753 RGS3P49796 1198 aa14.08□□□□□ -0.16
RNF43-207ENST00000583753 FMN1Q68DA7 1419 aa14.08□□□□□ -0.16
RNF43-207ENST00000583753 EXOC6Q8TAG9 804 aa14.07□□□□□ -0.16
RNF43-207ENST00000583753 TOP2BQ02880 1626 aa14.07□□□□□ -0.16
RNF43-207ENST00000583753 AKNAQ7Z591 1439 aa14.07□□□□□ -0.16
RNF43-207ENST00000583753 ERICH3Q5RHP9 1530 aa14.07□□□□□ -0.16
RNF43-207ENST00000583753 ZBED9Q6R2W3 1325 aa14.06□□□□□ -0.16
RNF43-207ENST00000583753 NBPF8Q3BBV2 869 aa14.06□□□□□ -0.16
RNF43-207ENST00000583753 KIF7Q2M1P5 1343 aa14.06□□□□□ -0.16
RNF43-207ENST00000583753 DCAF11Q8TEB1 546 aa14.06□□□□□ -0.16
RNF43-207ENST00000583753 CFDP1Q9UEE9 299 aaPredicted RBP14.06□□□□□ -0.16
RNF43-207ENST00000583753 FGD6Q6ZV73 1430 aa14.05□□□□□ -0.16
RNF43-207ENST00000583753 CANXP27824 592 aaKnown RBP14.05□□□□□ -0.16
RNF43-207ENST00000583753 PKD2Q13563 968 aa14.05□□□□□ -0.16
RNF43-207ENST00000583753 ERICH6BQ5W0A0 696 aa14.05□□□□□ -0.16
RNF43-207ENST00000583753 ZNF644Q9H582 1327 aaPredicted RBP14.05□□□□□ -0.16
RNF43-207ENST00000583753 RAD54L2Q9Y4B4 1467 aa14.05□□□□□ -0.16
RNF43-207ENST00000583753 SKAP1Q86WV1 359 aa14.04□□□□□ -0.16
RNF43-207ENST00000583753 ANO8Q9HCE9 1232 aaPredicted RBP14.03□□□□□ -0.16
RNF43-207ENST00000583753 CCDC7Q96M83 1385 aa14.03□□□□□ -0.16
RNF43-207ENST00000583753 IL27Q8NEV9 243 aa14.02□□□□□ -0.16
RNF43-207ENST00000583753 TIAM1Q13009 1591 aa14.02□□□□□ -0.16
RNF43-207ENST00000583753 FGD5Q6ZNL6 1462 aa14.02□□□□□ -0.17
RNF43-207ENST00000583753 RCAN3Q9UKA8 241 aa14.02□□□□□ -0.17
RNF43-207ENST00000583753 UACAQ9BZF9 1416 aa14.01□□□□□ -0.17
RNF43-207ENST00000583753 SENP3Q9H4L4 574 aaPredicted RBP14□□□□□ -0.17
RNF43-207ENST00000583753 UNC13AQ9UPW8 1703 aa13.99□□□□□ -0.17
RNF43-207ENST00000583753 CADPSQ9ULU8 1353 aa13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms