RNA–Protein interactions for RNA: ENST00000582481.1

SNX11-211, Transcript of sorting nexin 11, humanhuman

TSL 2

Gene SNX11, Length 627 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX11-211ENST00000582481 ADCY10Q96PN6 1610 aa17.08■□□□□ 0.32
SNX11-211ENST00000582481 FHAD1B1AJZ9 1412 aa17.08■□□□□ 0.32
SNX11-211ENST00000582481 SENP3Q9H4L4 574 aaPredicted RBP17.07■□□□□ 0.32
SNX11-211ENST00000582481 FAM69CQ0P6D2 419 aa17.06■□□□□ 0.32
SNX11-211ENST00000582481 RUSC2Q8N2Y8 1516 aa17.05■□□□□ 0.32
SNX11-211ENST00000582481 TSPOAP1O95153 1857 aa17.03■□□□□ 0.32
SNX11-211ENST00000582481 ERICH3Q5RHP9 1530 aa17.01■□□□□ 0.31
SNX11-211ENST00000582481 BIVM-ERCC5R4GMW8 1640 aa17■□□□□ 0.31
SNX11-211ENST00000582481 WRNQ14191 1432 aaPredicted RBP eCLIP16.99■□□□□ 0.31
SNX11-211ENST00000582481 TOP2BQ02880 1626 aa16.97■□□□□ 0.31
SNX11-211ENST00000582481 JPH4Q96JJ6 628 aa16.96■□□□□ 0.31
SNX11-211ENST00000582481 PPRC1Q5VV67 1664 aaKnown RBP16.96■□□□□ 0.31
SNX11-211ENST00000582481 ADGRL1O94910 1474 aa16.93■□□□□ 0.3
SNX11-211ENST00000582481 HECW2Q9P2P5 1572 aa16.93■□□□□ 0.3
SNX11-211ENST00000582481 COL17A1Q9UMD9 1497 aaPredicted RBP16.86■□□□□ 0.29
SNX11-211ENST00000582481 NPM1P06748 294 aaKnown RBP eCLIP16.84■□□□□ 0.29
SNX11-211ENST00000582481 PHF23Q9BUL5 403 aaPredicted RBP16.84■□□□□ 0.29
SNX11-211ENST00000582481 GLI2P10070 1586 aa16.81■□□□□ 0.28
SNX11-211ENST00000582481 KIAA0586Q9BVV6 1533 aa16.79■□□□□ 0.28
SNX11-211ENST00000582481 ABCC2Q92887 1545 aa16.76■□□□□ 0.27
SNX11-211ENST00000582481 ASXL2Q76L83 1435 aa16.75■□□□□ 0.27
SNX11-211ENST00000582481 CUL7Q14999 1698 aa16.74■□□□□ 0.27
SNX11-211ENST00000582481 MAP3K4Q9Y6R4 1608 aa16.74■□□□□ 0.27
SNX11-211ENST00000582481 PLB1Q6P1J6 1458 aa16.7■□□□□ 0.26
SNX11-211ENST00000582481 PTPRGP23470 1445 aa16.69■□□□□ 0.26
SNX11-211ENST00000582481 EPRSP07814 1512 aaKnown RBP16.68■□□□□ 0.26
SNX11-211ENST00000582481 UHRF1BP1LA0JNW5 1464 aa16.67■□□□□ 0.26
SNX11-211ENST00000582481 IGF1RP08069 1367 aa16.65■□□□□ 0.26
SNX11-211ENST00000582481 TNIKQ9UKE5 1360 aa16.63■□□□□ 0.25
SNX11-211ENST00000582481 FBXO41Q8TF61 875 aa16.62■□□□□ 0.25
SNX11-211ENST00000582481 KDM5BQ9UGL1 1544 aa16.61■□□□□ 0.25
SNX11-211ENST00000582481 ZCCHC11Q5TAX3 1644 aaKnown RBP16.6■□□□□ 0.25
SNX11-211ENST00000582481 DISP1Q96F81 1524 aa16.6■□□□□ 0.25
SNX11-211ENST00000582481 TTBK1Q5TCY1 1321 aaPredicted RBP16.58■□□□□ 0.24
SNX11-211ENST00000582481 UACAQ9BZF9 1416 aa16.58■□□□□ 0.24
SNX11-211ENST00000582481 TEX14Q8IWB6 1497 aa16.58■□□□□ 0.24
SNX11-211ENST00000582481 IQGAP2Q13576 1575 aa16.56■□□□□ 0.24
SNX11-211ENST00000582481 KIF21BO75037 1637 aa16.56■□□□□ 0.24
SNX11-211ENST00000582481 CARMIL2Q6F5E8 1435 aa16.53■□□□□ 0.24
SNX11-211ENST00000582481 KIF27Q86VH2 1401 aa16.51■□□□□ 0.23
SNX11-211ENST00000582481 WDR7Q9Y4E6 1490 aa16.49■□□□□ 0.23
SNX11-211ENST00000582481 SUPT5HO00267 1087 aaKnown RBP16.49■□□□□ 0.23
SNX11-211ENST00000582481 MAGI3Q5TCQ9 1506 aa16.48■□□□□ 0.23
SNX11-211ENST00000582481 CARMIL1Q5VZK9 1371 aa16.47■□□□□ 0.23
SNX11-211ENST00000582481 ADAMTSL3P82987 1691 aa16.46■□□□□ 0.23
SNX11-211ENST00000582481 CFAP43Q8NDM7 1665 aa16.46■□□□□ 0.23
SNX11-211ENST00000582481 UGGT2Q9NYU1 1516 aa16.46■□□□□ 0.23
SNX11-211ENST00000582481 KIAA0556O60303 1618 aa16.46■□□□□ 0.23
SNX11-211ENST00000582481 PTPRMP28827 1452 aa16.43■□□□□ 0.22
SNX11-211ENST00000582481 CD109Q6YHK3 1445 aa16.4■□□□□ 0.22
SNX11-211ENST00000582481 LMTK3Q96Q04 1460 aa16.4■□□□□ 0.22
SNX11-211ENST00000582481 PCF11O94913 1555 aaKnown RBP16.39■□□□□ 0.21
SNX11-211ENST00000582481 ARAP3Q8WWN8 1544 aa16.37■□□□□ 0.21
SNX11-211ENST00000582481 ABCA8O94911 1581 aa16.36■□□□□ 0.21
SNX11-211ENST00000582481 MADDQ8WXG6 1647 aa16.36■□□□□ 0.21
SNX11-211ENST00000582481 BCORL1Q5H9F3 1711 aa16.34■□□□□ 0.21
SNX11-211ENST00000582481 FRMPD1Q5SYB0 1578 aa16.32■□□□□ 0.2
SNX11-211ENST00000582481 ILDR2Q71H61 639 aa16.3■□□□□ 0.2
SNX11-211ENST00000582481 RAPGEF2Q9Y4G8 1499 aa16.27■□□□□ 0.19
SNX11-211ENST00000582481 KCNH8Q96L42 1107 aa16.26■□□□□ 0.19
SNX11-211ENST00000582481 ABCA9Q8IUA7 1624 aa16.26■□□□□ 0.19
SNX11-211ENST00000582481 RIMS1Q86UR5 1692 aaKnown RBP16.25■□□□□ 0.19
SNX11-211ENST00000582481 CTTNBP2Q8WZ74 1663 aa16.25■□□□□ 0.19
SNX11-211ENST00000582481 SIGLEC1Q9BZZ2 1709 aa16.23■□□□□ 0.19
SNX11-211ENST00000582481 ARHGEF40Q8TER5 1519 aa16.2■□□□□ 0.18
SNX11-211ENST00000582481 RAPGEF3O95398 923 aa16.2■□□□□ 0.18
SNX11-211ENST00000582481 HSPA2P54652 639 aa16.2■□□□□ 0.18
SNX11-211ENST00000582481 SOCS7O14512 581 aa16.19■□□□□ 0.18
SNX11-211ENST00000582481 ATP10BO94823 1461 aa16.17■□□□□ 0.18
SNX11-211ENST00000582481 CERKQ8TCT0 537 aa16.17■□□□□ 0.18
SNX11-211ENST00000582481 NEO1Q92859 1461 aa16.16■□□□□ 0.18
SNX11-211ENST00000582481 RICTORQ6R327 1708 aa16.16■□□□□ 0.18
SNX11-211ENST00000582481 GOLGA3Q08378 1498 aa16.15■□□□□ 0.18
SNX11-211ENST00000582481 PHLDB1Q86UU1 1377 aa16.14■□□□□ 0.17
SNX11-211ENST00000582481 DISP3Q9P2K9 1392 aa16.14■□□□□ 0.17
SNX11-211ENST00000582481 SPATA31D1Q6ZQQ2 1576 aa16.1■□□□□ 0.17
SNX11-211ENST00000582481 ARID3CA6NKF2 412 aa16.1■□□□□ 0.17
SNX11-211ENST00000582481 TTC37Q6PGP7 1564 aa16.08■□□□□ 0.16
SNX11-211ENST00000582481 ARID4BQ4LE39 1312 aaPredicted RBP16.07■□□□□ 0.16
SNX11-211ENST00000582481 ZMYM4Q5VZL5 1548 aa16.07■□□□□ 0.16
SNX11-211ENST00000582481 STRCQ7RTU9 1775 aa16.07■□□□□ 0.16
SNX11-211ENST00000582481 FER1L4A9Z1Z3 1794 aa16.06■□□□□ 0.16
SNX11-211ENST00000582481 FHOD3Q2V2M9 1422 aa16.05■□□□□ 0.16
SNX11-211ENST00000582481 YEATS2Q9ULM3 1422 aa16.05■□□□□ 0.16
SNX11-211ENST00000582481 PRXQ9BXM0 1461 aa16.03■□□□□ 0.16
SNX11-211ENST00000582481 PREX1Q8TCU6 1659 aa16.02■□□□□ 0.16
SNX11-211ENST00000582481 RAPGEF6Q8TEU7 1601 aa16.02■□□□□ 0.16
SNX11-211ENST00000582481 SAMD9Q5K651 1589 aa16.02■□□□□ 0.16
SNX11-211ENST00000582481 FANCAO15360 1455 aa16.02■□□□□ 0.15
SNX11-211ENST00000582481 DENND4BO75064 1496 aaPredicted RBP16.02■□□□□ 0.15
SNX11-211ENST00000582481 ZFYVE16Q7Z3T8 1539 aa16■□□□□ 0.15
SNX11-211ENST00000582481 NUP153P49790 1475 aaKnown RBP16■□□□□ 0.15
SNX11-211ENST00000582481 PLPPR3Q6T4P5 718 aa16■□□□□ 0.15
SNX11-211ENST00000582481 ARHGEF12Q9NZN5 1544 aa15.99■□□□□ 0.15
SNX11-211ENST00000582481 AKNAQ7Z591 1439 aa15.99■□□□□ 0.15
SNX11-211ENST00000582481 EFCAB5A4FU69 1503 aa15.97■□□□□ 0.15
SNX11-211ENST00000582481 HECW1Q76N89 1606 aa15.97■□□□□ 0.15
SNX11-211ENST00000582481 POGZQ7Z3K3 1410 aa15.95■□□□□ 0.14
SNX11-211ENST00000582481 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.95■□□□□ 0.14
SNX11-211ENST00000582481 LTBP4Q8N2S1 1624 aa15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms