RNA–Protein interactions for RNA: ENST00000581708.5

CDK5RAP3-222, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 543 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-222ENST00000581708 KIAA0586Q9BVV6 1533 aa21.53■■□□□ 1.04
CDK5RAP3-222ENST00000581708 ERCC6L2Q5T890 1561 aa21.51■■□□□ 1.03
CDK5RAP3-222ENST00000581708 PRG4Q92954 1404 aaPredicted RBP21.5■■□□□ 1.03
CDK5RAP3-222ENST00000581708 TRHP20396 242 aaPredicted RBP21.4■■□□□ 1.02
CDK5RAP3-222ENST00000581708 RAPGEF2Q9Y4G8 1499 aa21.39■■□□□ 1.02
CDK5RAP3-222ENST00000581708 IQGAP2Q13576 1575 aa21.34■■□□□ 1.01
CDK5RAP3-222ENST00000581708 CARMIL2Q6F5E8 1435 aa21.32■■□□□ 1
CDK5RAP3-222ENST00000581708 PRXQ9BXM0 1461 aa21.26■□□□□ 0.99
CDK5RAP3-222ENST00000581708 UGGT2Q9NYU1 1516 aa21.24■□□□□ 0.99
CDK5RAP3-222ENST00000581708 TNIKQ9UKE5 1360 aa21.24■□□□□ 0.99
CDK5RAP3-222ENST00000581708 PTPRGP23470 1445 aa21.24■□□□□ 0.99
CDK5RAP3-222ENST00000581708 EEA1Q15075 1411 aa21.23■□□□□ 0.99
CDK5RAP3-222ENST00000581708 NPM1P06748 294 aaKnown RBP eCLIP21.23■□□□□ 0.99
CDK5RAP3-222ENST00000581708 ADCY10Q96PN6 1610 aa21.2■□□□□ 0.98
CDK5RAP3-222ENST00000581708 DISP1Q96F81 1524 aa21.19■□□□□ 0.98
CDK5RAP3-222ENST00000581708 MAPKBP1O60336 1514 aa21.19■□□□□ 0.98
CDK5RAP3-222ENST00000581708 CTTNBP2Q8WZ74 1663 aa21.18■□□□□ 0.98
CDK5RAP3-222ENST00000581708 CSRNP3Q8WYN3 585 aa21.17■□□□□ 0.98
CDK5RAP3-222ENST00000581708 UHRF1BP1LA0JNW5 1464 aa21.13■□□□□ 0.97
CDK5RAP3-222ENST00000581708 GOLGA3Q08378 1498 aa21.13■□□□□ 0.97
CDK5RAP3-222ENST00000581708 KIAA0556O60303 1618 aa21.11■□□□□ 0.97
CDK5RAP3-222ENST00000581708 ABCC10Q5T3U5 1492 aa21.1■□□□□ 0.97
CDK5RAP3-222ENST00000581708 UACAQ9BZF9 1416 aa21.1■□□□□ 0.97
CDK5RAP3-222ENST00000581708 ABCC2Q92887 1545 aa21.09■□□□□ 0.97
CDK5RAP3-222ENST00000581708 KIF13AQ9H1H9 1805 aa21.08■□□□□ 0.96
CDK5RAP3-222ENST00000581708 DIP2BQ9P265 1576 aa21.02■□□□□ 0.96
CDK5RAP3-222ENST00000581708 FAM69CQ0P6D2 419 aa21.02■□□□□ 0.96
CDK5RAP3-222ENST00000581708 TTBK1Q5TCY1 1321 aaPredicted RBP21.02■□□□□ 0.95
CDK5RAP3-222ENST00000581708 KDM5BQ9UGL1 1544 aa21.01■□□□□ 0.95
CDK5RAP3-222ENST00000581708 CHIC1Q5VXU3 224 aa21.01■□□□□ 0.95
CDK5RAP3-222ENST00000581708 PLB1Q6P1J6 1458 aa21.01■□□□□ 0.95
CDK5RAP3-222ENST00000581708 FAM9AQ8IZU1 332 aaPredicted RBP21■□□□□ 0.95
CDK5RAP3-222ENST00000581708 KIF21BO75037 1637 aa20.96■□□□□ 0.95
CDK5RAP3-222ENST00000581708 ASXL2Q76L83 1435 aa20.95■□□□□ 0.95
CDK5RAP3-222ENST00000581708 ABCA8O94911 1581 aa20.92■□□□□ 0.94
CDK5RAP3-222ENST00000581708 GLI2P10070 1586 aa20.92■□□□□ 0.94
CDK5RAP3-222ENST00000581708 SAMD9Q5K651 1589 aa20.91■□□□□ 0.94
CDK5RAP3-222ENST00000581708 ZCCHC11Q5TAX3 1644 aaKnown RBP20.9■□□□□ 0.94
CDK5RAP3-222ENST00000581708 EPRSP07814 1512 aaKnown RBP20.83■□□□□ 0.93
CDK5RAP3-222ENST00000581708 WDR7Q9Y4E6 1490 aa20.83■□□□□ 0.93
CDK5RAP3-222ENST00000581708 EFCAB5A4FU69 1503 aa20.82■□□□□ 0.92
CDK5RAP3-222ENST00000581708 P3H3Q8IVL6 736 aa20.79■□□□□ 0.92
CDK5RAP3-222ENST00000581708 MAP3K4Q9Y6R4 1608 aa20.78■□□□□ 0.92
CDK5RAP3-222ENST00000581708 TSPOAP1O95153 1857 aa20.77■□□□□ 0.92
CDK5RAP3-222ENST00000581708 TEX14Q8IWB6 1497 aa20.75■□□□□ 0.91
CDK5RAP3-222ENST00000581708 KDM6BO15054 1643 aa20.75■□□□□ 0.91
CDK5RAP3-222ENST00000581708 RAPGEF6Q8TEU7 1601 aa20.75■□□□□ 0.91
CDK5RAP3-222ENST00000581708 UBTFP17480 764 aaKnown RBP20.74■□□□□ 0.91
CDK5RAP3-222ENST00000581708 ATP10BO94823 1461 aa20.74■□□□□ 0.91
CDK5RAP3-222ENST00000581708 PPRC1Q5VV67 1664 aaKnown RBP20.73■□□□□ 0.91
CDK5RAP3-222ENST00000581708 FHOD3Q2V2M9 1422 aa20.71■□□□□ 0.91
CDK5RAP3-222ENST00000581708 CFAP43Q8NDM7 1665 aa20.7■□□□□ 0.9
CDK5RAP3-222ENST00000581708 MAGI3Q5TCQ9 1506 aa20.68■□□□□ 0.9
CDK5RAP3-222ENST00000581708 RANGAP1P46060 587 aaPredicted RBP20.67■□□□□ 0.9
CDK5RAP3-222ENST00000581708 NUP153P49790 1475 aaKnown RBP20.67■□□□□ 0.9
CDK5RAP3-222ENST00000581708 CD109Q6YHK3 1445 aa20.66■□□□□ 0.9
CDK5RAP3-222ENST00000581708 KCNH8Q96L42 1107 aa20.65■□□□□ 0.9
CDK5RAP3-222ENST00000581708 FMN1Q68DA7 1419 aa20.63■□□□□ 0.89
CDK5RAP3-222ENST00000581708 ARHGAP35Q9NRY4 1499 aa20.6■□□□□ 0.89
CDK5RAP3-222ENST00000581708 ARID3CA6NKF2 412 aa20.59■□□□□ 0.89
CDK5RAP3-222ENST00000581708 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.59■□□□□ 0.89
CDK5RAP3-222ENST00000581708 HNRNPUL2Q1KMD3 747 aaKnown RBP20.59■□□□□ 0.89
CDK5RAP3-222ENST00000581708 ABCA9Q8IUA7 1624 aa20.59■□□□□ 0.89
CDK5RAP3-222ENST00000581708 PHLDB1Q86UU1 1377 aa20.58■□□□□ 0.88
CDK5RAP3-222ENST00000581708 PLEKHD1A6NEE1 506 aa20.57■□□□□ 0.88
CDK5RAP3-222ENST00000581708 AEBP2Q6ZN18 517 aaPredicted RBP20.55■□□□□ 0.88
CDK5RAP3-222ENST00000581708 EHMT2Q96KQ7 1210 aa20.55■□□□□ 0.88
CDK5RAP3-222ENST00000581708 COL17A1Q9UMD9 1497 aaPredicted RBP20.55■□□□□ 0.88
CDK5RAP3-222ENST00000581708 HECW1Q76N89 1606 aa20.52■□□□□ 0.88
CDK5RAP3-222ENST00000581708 ARAP3Q8WWN8 1544 aa20.51■□□□□ 0.87
CDK5RAP3-222ENST00000581708 NEO1Q92859 1461 aa20.5■□□□□ 0.87
CDK5RAP3-222ENST00000581708 CDK11AQ9UQ88 783 aaPredicted RBP20.48■□□□□ 0.87
CDK5RAP3-222ENST00000581708 CDK13Q14004 1512 aaKnown RBP20.44■□□□□ 0.86
CDK5RAP3-222ENST00000581708 CASKIN1Q8WXD9 1431 aa20.42■□□□□ 0.86
CDK5RAP3-222ENST00000581708 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.42■□□□□ 0.86
CDK5RAP3-222ENST00000581708 CLIP1P30622 1438 aa20.41■□□□□ 0.86
CDK5RAP3-222ENST00000581708 CFAP74Q9C0B2 1584 aa20.4■□□□□ 0.86
CDK5RAP3-222ENST00000581708 ATP1B4Q9UN42 357 aaPredicted RBP20.4■□□□□ 0.86
CDK5RAP3-222ENST00000581708 CCDC18Q5T9S5 1454 aa20.39■□□□□ 0.85
CDK5RAP3-222ENST00000581708 FYCO1Q9BQS8 1478 aa20.37■□□□□ 0.85
CDK5RAP3-222ENST00000581708 TROQ12816 1431 aaPredicted RBP20.36■□□□□ 0.85
CDK5RAP3-222ENST00000581708 KDM4FA0A1W2PPD8 638 aa20.36■□□□□ 0.85
CDK5RAP3-222ENST00000581708 TTC37Q6PGP7 1564 aa20.36■□□□□ 0.85
CDK5RAP3-222ENST00000581708 FANCAO15360 1455 aa20.36■□□□□ 0.85
CDK5RAP3-222ENST00000581708 PLCH2O75038 1416 aa20.34■□□□□ 0.85
CDK5RAP3-222ENST00000581708 PCF11O94913 1555 aaKnown RBP20.34■□□□□ 0.85
CDK5RAP3-222ENST00000581708 AKNAQ7Z591 1439 aa20.33■□□□□ 0.84
CDK5RAP3-222ENST00000581708 KIF14Q15058 1648 aa20.32■□□□□ 0.84
CDK5RAP3-222ENST00000581708 LRRIQ1Q96JM4 1722 aa20.31■□□□□ 0.84
CDK5RAP3-222ENST00000581708 DENND4BO75064 1496 aaPredicted RBP20.3■□□□□ 0.84
CDK5RAP3-222ENST00000581708 ADGRL1O94910 1474 aa20.3■□□□□ 0.84
CDK5RAP3-222ENST00000581708 RAPGEF3O95398 923 aa20.28■□□□□ 0.84
CDK5RAP3-222ENST00000581708 MYO5CQ9NQX4 1742 aa20.27■□□□□ 0.84
CDK5RAP3-222ENST00000581708 FRMPD1Q5SYB0 1578 aa20.27■□□□□ 0.84
CDK5RAP3-222ENST00000581708 EFCAB2Q5VUJ9 269 aa20.27■□□□□ 0.84
CDK5RAP3-222ENST00000581708 RICTORQ6R327 1708 aa20.25■□□□□ 0.83
CDK5RAP3-222ENST00000581708 CEP162Q5TB80 1403 aa20.24■□□□□ 0.83
CDK5RAP3-222ENST00000581708 MAGI2Q86UL8 1455 aa20.24■□□□□ 0.83
CDK5RAP3-222ENST00000581708 ZMYM4Q5VZL5 1548 aa20.22■□□□□ 0.83
CDK5RAP3-222ENST00000581708 SCAPERQ9BY12 1400 aa20.19■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms