RNA–Protein interactions for RNA: ENST00000581583.1

RTTN-207, Transcript of rotatin, humanhuman

TSL 2

Gene RTTN, Length 2,355 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-207ENST00000581583 TIAM1Q13009 1591 aa18.04■□□□□ 0.48
RTTN-207ENST00000581583 TARBP1Q13395 1621 aaKnown RBP18.03■□□□□ 0.48
RTTN-207ENST00000581583 CCNB3Q8WWL7 1395 aa18.02■□□□□ 0.47
RTTN-207ENST00000581583 CTTNBP2Q8WZ74 1663 aa18.01■□□□□ 0.47
RTTN-207ENST00000581583 MRC2Q9UBG0 1479 aa18.01■□□□□ 0.47
RTTN-207ENST00000581583 AQRO60306 1485 aaKnown RBP eCLIP18■□□□□ 0.47
RTTN-207ENST00000581583 LRRC9Q6ZRR7 1453 aa18■□□□□ 0.47
RTTN-207ENST00000581583 P3H3Q8IVL6 736 aa17.98■□□□□ 0.47
RTTN-207ENST00000581583 FHOD3Q2V2M9 1422 aa17.98■□□□□ 0.47
RTTN-207ENST00000581583 FYCO1Q9BQS8 1478 aa17.98■□□□□ 0.47
RTTN-207ENST00000581583 CLSPNQ9HAW4 1339 aa17.97■□□□□ 0.47
RTTN-207ENST00000581583 CASKIN1Q8WXD9 1431 aa17.97■□□□□ 0.47
RTTN-207ENST00000581583 FMN1Q68DA7 1419 aa17.96■□□□□ 0.47
RTTN-207ENST00000581583 PCF11O94913 1555 aaKnown RBP17.95■□□□□ 0.46
RTTN-207ENST00000581583 CFAP43Q8NDM7 1665 aa17.93■□□□□ 0.46
RTTN-207ENST00000581583 SAMD9Q5K651 1589 aa17.91■□□□□ 0.46
RTTN-207ENST00000581583 IFT140Q96RY7 1462 aa17.88■□□□□ 0.45
RTTN-207ENST00000581583 WDR62O43379 1518 aa17.88■□□□□ 0.45
RTTN-207ENST00000581583 ATP1B4Q9UN42 357 aaPredicted RBP17.88■□□□□ 0.45
RTTN-207ENST00000581583 DHX57Q6P158 1386 aaKnown RBP17.88■□□□□ 0.45
RTTN-207ENST00000581583 GRIN2BQ13224 1484 aa17.88■□□□□ 0.45
RTTN-207ENST00000581583 PHLDB1Q86UU1 1377 aa17.87■□□□□ 0.45
RTTN-207ENST00000581583 SNAPC4Q5SXM2 1469 aa17.86■□□□□ 0.45
RTTN-207ENST00000581583 PBRM1Q86U86 1689 aa17.85■□□□□ 0.45
RTTN-207ENST00000581583 ZNF316A6NFI3 1004 aaPredicted RBP17.83■□□□□ 0.45
RTTN-207ENST00000581583 ADAMTS12P58397 1594 aa17.83■□□□□ 0.44
RTTN-207ENST00000581583 DIEXFQ68CQ4 756 aaKnown RBP17.82■□□□□ 0.44
RTTN-207ENST00000581583 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.82■□□□□ 0.44
RTTN-207ENST00000581583 THOC2Q8NI27 1593 aaKnown RBP17.8■□□□□ 0.44
RTTN-207ENST00000581583 ITGAEP38570 1179 aa17.79■□□□□ 0.44
RTTN-207ENST00000581583 ZNF608Q9ULD9 1512 aaPredicted RBP17.77■□□□□ 0.44
RTTN-207ENST00000581583 IQGAP2Q13576 1575 aa17.77■□□□□ 0.44
RTTN-207ENST00000581583 MTUS2Q5JR59 1369 aa17.76■□□□□ 0.43
RTTN-207ENST00000581583 ERCC6Q03468 1493 aa17.76■□□□□ 0.43
RTTN-207ENST00000581583 FAM50AQ14320 339 aaKnown RBP17.75■□□□□ 0.43
RTTN-207ENST00000581583 RAB3GAP2Q9H2M9 1393 aa17.75■□□□□ 0.43
RTTN-207ENST00000581583 SETD5Q9C0A6 1442 aa17.75■□□□□ 0.43
RTTN-207ENST00000581583 CCDC18Q5T9S5 1454 aa17.71■□□□□ 0.43
RTTN-207ENST00000581583 UGGT2Q9NYU1 1516 aa17.71■□□□□ 0.43
RTTN-207ENST00000581583 FGD6Q6ZV73 1430 aa17.71■□□□□ 0.42
RTTN-207ENST00000581583 KIAA0586Q9BVV6 1533 aa17.7■□□□□ 0.42
RTTN-207ENST00000581583 EHBP1L1Q8N3D4 1523 aa17.67■□□□□ 0.42
RTTN-207ENST00000581583 EIF4G3O43432 1585 aaKnown RBP17.67■□□□□ 0.42
RTTN-207ENST00000581583 LRRIQ1Q96JM4 1722 aa17.67■□□□□ 0.42
RTTN-207ENST00000581583 GRIN2AQ12879 1464 aa17.66■□□□□ 0.42
RTTN-207ENST00000581583 NCOA2Q15596 1464 aa17.66■□□□□ 0.42
RTTN-207ENST00000581583 MAGI1Q96QZ7 1491 aaPredicted RBP17.65■□□□□ 0.42
RTTN-207ENST00000581583 HECW1Q76N89 1606 aa17.65■□□□□ 0.42
RTTN-207ENST00000581583 MYOM3Q5VTT5 1437 aa17.65■□□□□ 0.42
RTTN-207ENST00000581583 SUPT6HQ7KZ85 1726 aaKnown RBP17.63■□□□□ 0.41
RTTN-207ENST00000581583 ARHGEF11O15085 1522 aa17.62■□□□□ 0.41
RTTN-207ENST00000581583 EPRSP07814 1512 aaKnown RBP17.62■□□□□ 0.41
RTTN-207ENST00000581583 MAPKBP1O60336 1514 aa17.6■□□□□ 0.41
RTTN-207ENST00000581583 DISP1Q96F81 1524 aa17.59■□□□□ 0.41
RTTN-207ENST00000581583 SYNJ2O15056 1496 aa17.59■□□□□ 0.41
RTTN-207ENST00000581583 CHMP7Q8WUX9 453 aaPredicted RBP17.58■□□□□ 0.41
RTTN-207ENST00000581583 MAGI3Q5TCQ9 1506 aa17.58■□□□□ 0.4
RTTN-207ENST00000581583 KIAA0556O60303 1618 aa17.57■□□□□ 0.4
RTTN-207ENST00000581583 HFM1A2PYH4 1435 aa17.56■□□□□ 0.4
RTTN-207ENST00000581583 TIMELESSQ9UNS1 1208 aa17.54■□□□□ 0.4
RTTN-207ENST00000581583 PTPRKQ15262 1439 aa17.53■□□□□ 0.4
RTTN-207ENST00000581583 TCOF1Q13428 1488 aaKnown RBP17.52■□□□□ 0.4
RTTN-207ENST00000581583 MIA2Q96PC5 1412 aa17.52■□□□□ 0.4
RTTN-207ENST00000581583 PTPN23Q9H3S7 1636 aa17.52■□□□□ 0.39
RTTN-207ENST00000581583 CDK13Q14004 1512 aaKnown RBP17.51■□□□□ 0.39
RTTN-207ENST00000581583 NUP160Q12769 1436 aa17.5■□□□□ 0.39
RTTN-207ENST00000581583 CEP170Q5SW79 1584 aa17.5■□□□□ 0.39
RTTN-207ENST00000581583 NAIPQ13075 1403 aa17.48■□□□□ 0.39
RTTN-207ENST00000581583 NUP153P49790 1475 aaKnown RBP17.48■□□□□ 0.39
RTTN-207ENST00000581583 CDK11AQ9UQ88 783 aaPredicted RBP17.48■□□□□ 0.39
RTTN-207ENST00000581583 FBLN2P98095 1184 aa17.47■□□□□ 0.39
RTTN-207ENST00000581583 CARMIL2Q6F5E8 1435 aa17.46■□□□□ 0.39
RTTN-207ENST00000581583 UACAQ9BZF9 1416 aa17.46■□□□□ 0.39
RTTN-207ENST00000581583 RAPGEF6Q8TEU7 1601 aa17.46■□□□□ 0.39
RTTN-207ENST00000581583 JPH4Q96JJ6 628 aa17.46■□□□□ 0.39
RTTN-207ENST00000581583 CENPBP07199 599 aaPredicted RBP17.45■□□□□ 0.38
RTTN-207ENST00000581583 MIER1Q8N108 512 aa17.44■□□□□ 0.38
RTTN-207ENST00000581583 AKNAQ7Z591 1439 aa17.44■□□□□ 0.38
RTTN-207ENST00000581583 SIN3AQ96ST3 1273 aa17.43■□□□□ 0.38
RTTN-207ENST00000581583 ACIN1Q9UKV3 1341 aaKnown RBP17.42■□□□□ 0.38
RTTN-207ENST00000581583 ARID3CA6NKF2 412 aa17.42■□□□□ 0.38
RTTN-207ENST00000581583 NEUROD1Q13562 356 aa17.41■□□□□ 0.38
RTTN-207ENST00000581583 TROQ12816 1431 aaPredicted RBP17.37■□□□□ 0.37
RTTN-207ENST00000581583 PLB1Q6P1J6 1458 aa17.37■□□□□ 0.37
RTTN-207ENST00000581583 PPP1R15AO75807 674 aaPredicted RBP17.36■□□□□ 0.37
RTTN-207ENST00000581583 SCAF1Q9H7N4 1312 aaKnown RBP17.35■□□□□ 0.37
RTTN-207ENST00000581583 RRP7BPQ9NSQ0 103 aa17.35■□□□□ 0.37
RTTN-207ENST00000581583 CHIC2Q9UKJ5 165 aa17.35■□□□□ 0.37
RTTN-207ENST00000581583 ROCK1Q13464 1354 aa17.34■□□□□ 0.37
RTTN-207ENST00000581583 GCC2Q8IWJ2 1684 aa17.33■□□□□ 0.37
RTTN-207ENST00000581583 PRG4Q92954 1404 aaPredicted RBP17.33■□□□□ 0.36
RTTN-207ENST00000581583 DAPK1P53355 1430 aa17.32■□□□□ 0.36
RTTN-207ENST00000581583 TONSLQ96HA7 1378 aa17.3■□□□□ 0.36
RTTN-207ENST00000581583 ABCC5O15440 1437 aa17.3■□□□□ 0.36
RTTN-207ENST00000581583 ABCA8O94911 1581 aa17.29■□□□□ 0.36
RTTN-207ENST00000581583 DNMT1P26358 1616 aaKnown RBP17.29■□□□□ 0.36
RTTN-207ENST00000581583 ADCY10Q96PN6 1610 aa17.28■□□□□ 0.36
RTTN-207ENST00000581583 CFDP1Q9UEE9 299 aaPredicted RBP17.27■□□□□ 0.36
RTTN-207ENST00000581583 GPATCH8Q9UKJ3 1502 aaKnown RBP17.27■□□□□ 0.35
RTTN-207ENST00000581583 PLEKHD1A6NEE1 506 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms