RNA–Protein interactions for RNA: ENST00000581544.5

EIF4A1-218, Transcript of eukaryotic translation initiation factor 4A1, humanhuman

TSL 2

Gene EIF4A1, Length 1,444 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EIF4A1-218ENST00000581544 SAMD9Q5K651 1589 aa18.01■□□□□ 0.47
EIF4A1-218ENST00000581544 EFCAB5A4FU69 1503 aa18.01■□□□□ 0.47
EIF4A1-218ENST00000581544 GRIN2AQ12879 1464 aa17.99■□□□□ 0.47
EIF4A1-218ENST00000581544 SYNJ2O15056 1496 aa17.98■□□□□ 0.47
EIF4A1-218ENST00000581544 IQGAP2Q13576 1575 aa17.95■□□□□ 0.46
EIF4A1-218ENST00000581544 NUP160Q12769 1436 aa17.92■□□□□ 0.46
EIF4A1-218ENST00000581544 KIAA0586Q9BVV6 1533 aa17.92■□□□□ 0.46
EIF4A1-218ENST00000581544 UGGT2Q9NYU1 1516 aa17.92■□□□□ 0.46
EIF4A1-218ENST00000581544 CEP170Q5SW79 1584 aa17.91■□□□□ 0.46
EIF4A1-218ENST00000581544 RANGAP1P46060 587 aaPredicted RBP17.88■□□□□ 0.45
EIF4A1-218ENST00000581544 TRIM26Q12899 539 aaPredicted RBP17.88■□□□□ 0.45
EIF4A1-218ENST00000581544 MAP3K1Q13233 1512 aa17.86■□□□□ 0.45
EIF4A1-218ENST00000581544 FHOD3Q2V2M9 1422 aa17.85■□□□□ 0.45
EIF4A1-218ENST00000581544 CHD1O14646 1710 aa17.84■□□□□ 0.45
EIF4A1-218ENST00000581544 PCF11O94913 1555 aaKnown RBP17.84■□□□□ 0.45
EIF4A1-218ENST00000581544 DISP1Q96F81 1524 aa17.82■□□□□ 0.44
EIF4A1-218ENST00000581544 CFAP43Q8NDM7 1665 aa17.8■□□□□ 0.44
EIF4A1-218ENST00000581544 CASKIN1Q8WXD9 1431 aa17.8■□□□□ 0.44
EIF4A1-218ENST00000581544 FYCO1Q9BQS8 1478 aa17.8■□□□□ 0.44
EIF4A1-218ENST00000581544 PCGF6Q9BYE7 350 aa17.8■□□□□ 0.44
EIF4A1-218ENST00000581544 LRRIQ1Q96JM4 1722 aa17.79■□□□□ 0.44
EIF4A1-218ENST00000581544 KIAA0556O60303 1618 aa17.79■□□□□ 0.44
EIF4A1-218ENST00000581544 TIAM1Q13009 1591 aa17.78■□□□□ 0.44
EIF4A1-218ENST00000581544 FMN1Q68DA7 1419 aa17.78■□□□□ 0.44
EIF4A1-218ENST00000581544 PPARGC1BQ86YN6 1023 aaKnown RBP17.78■□□□□ 0.44
EIF4A1-218ENST00000581544 CHMP7Q8WUX9 453 aaPredicted RBP17.78■□□□□ 0.44
EIF4A1-218ENST00000581544 SHROOM2Q13796 1616 aa17.73■□□□□ 0.43
EIF4A1-218ENST00000581544 P3H3Q8IVL6 736 aa17.72■□□□□ 0.43
EIF4A1-218ENST00000581544 KANK4Q5T7N3 995 aaPredicted RBP17.71■□□□□ 0.43
EIF4A1-218ENST00000581544 LRRC9Q6ZRR7 1453 aa17.67■□□□□ 0.42
EIF4A1-218ENST00000581544 CLASP1Q7Z460 1538 aa17.67■□□□□ 0.42
EIF4A1-218ENST00000581544 FBLN2P98095 1184 aa17.64■□□□□ 0.42
EIF4A1-218ENST00000581544 JPH4Q96JJ6 628 aa17.64■□□□□ 0.42
EIF4A1-218ENST00000581544 APLP2Q06481 763 aa17.64■□□□□ 0.41
EIF4A1-218ENST00000581544 HECW1Q76N89 1606 aa17.63■□□□□ 0.41
EIF4A1-218ENST00000581544 RAPGEF6Q8TEU7 1601 aa17.6■□□□□ 0.41
EIF4A1-218ENST00000581544 RRBP1Q9P2E9 1410 aaKnown RBP17.59■□□□□ 0.41
EIF4A1-218ENST00000581544 CCDC18Q5T9S5 1454 aa17.59■□□□□ 0.41
EIF4A1-218ENST00000581544 CARMIL2Q6F5E8 1435 aa17.58■□□□□ 0.4
EIF4A1-218ENST00000581544 NUP153P49790 1475 aaKnown RBP17.57■□□□□ 0.4
EIF4A1-218ENST00000581544 EPRSP07814 1512 aaKnown RBP17.57■□□□□ 0.4
EIF4A1-218ENST00000581544 MAGI3Q5TCQ9 1506 aa17.57■□□□□ 0.4
EIF4A1-218ENST00000581544 ABCA8O94911 1581 aa17.57■□□□□ 0.4
EIF4A1-218ENST00000581544 TTBK1Q5TCY1 1321 aaPredicted RBP17.56■□□□□ 0.4
EIF4A1-218ENST00000581544 ARHGEF11O15085 1522 aa17.55■□□□□ 0.4
EIF4A1-218ENST00000581544 PRG4Q92954 1404 aaPredicted RBP17.55■□□□□ 0.4
EIF4A1-218ENST00000581544 ERCC6L2Q5T890 1561 aa17.53■□□□□ 0.4
EIF4A1-218ENST00000581544 EHBP1L1Q8N3D4 1523 aa17.52■□□□□ 0.4
EIF4A1-218ENST00000581544 CDK13Q14004 1512 aaKnown RBP17.51■□□□□ 0.39
EIF4A1-218ENST00000581544 PLB1Q6P1J6 1458 aa17.51■□□□□ 0.39
EIF4A1-218ENST00000581544 PHLDB1Q86UU1 1377 aa17.51■□□□□ 0.39
EIF4A1-218ENST00000581544 SUPT6HQ7KZ85 1726 aaKnown RBP17.47■□□□□ 0.39
EIF4A1-218ENST00000581544 NCOA2Q15596 1464 aa17.44■□□□□ 0.38
EIF4A1-218ENST00000581544 CCNB3Q8WWL7 1395 aa17.44■□□□□ 0.38
EIF4A1-218ENST00000581544 MTUS2Q5JR59 1369 aa17.42■□□□□ 0.38
EIF4A1-218ENST00000581544 ATP1B4Q9UN42 357 aaPredicted RBP17.42■□□□□ 0.38
EIF4A1-218ENST00000581544 PTPRGP23470 1445 aa17.42■□□□□ 0.38
EIF4A1-218ENST00000581544 ADCY10Q96PN6 1610 aa17.42■□□□□ 0.38
EIF4A1-218ENST00000581544 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.41■□□□□ 0.386e-7■■□□□ 14.4
EIF4A1-218ENST00000581544 ATP10BO94823 1461 aa17.39■□□□□ 0.38
EIF4A1-218ENST00000581544 HRCP23327 699 aa17.38■□□□□ 0.37
EIF4A1-218ENST00000581544 FGD6Q6ZV73 1430 aa17.38■□□□□ 0.37
EIF4A1-218ENST00000581544 MYOM3Q5VTT5 1437 aa17.37■□□□□ 0.37
EIF4A1-218ENST00000581544 UACAQ9BZF9 1416 aa17.36■□□□□ 0.37
EIF4A1-218ENST00000581544 ABCC2Q92887 1545 aa17.36■□□□□ 0.37
EIF4A1-218ENST00000581544 TROQ12816 1431 aaPredicted RBP17.36■□□□□ 0.37
EIF4A1-218ENST00000581544 UHRF1BP1LA0JNW5 1464 aa17.36■□□□□ 0.37
EIF4A1-218ENST00000581544 TCOF1Q13428 1488 aaKnown RBP17.33■□□□□ 0.37
EIF4A1-218ENST00000581544 KIF14Q15058 1648 aa17.32■□□□□ 0.36
EIF4A1-218ENST00000581544 PTPN23Q9H3S7 1636 aa17.3■□□□□ 0.36
EIF4A1-218ENST00000581544 OSCARQ8IYS5 282 aa17.3■□□□□ 0.36
EIF4A1-218ENST00000581544 MIA2Q96PC5 1412 aa17.29■□□□□ 0.36
EIF4A1-218ENST00000581544 KDM5BQ9UGL1 1544 aa17.29■□□□□ 0.36
EIF4A1-218ENST00000581544 ABCC10Q5T3U5 1492 aa17.29■□□□□ 0.36
EIF4A1-218ENST00000581544 HNRNPUL2Q1KMD3 747 aaKnown RBP17.28■□□□□ 0.36
EIF4A1-218ENST00000581544 ARID3CA6NKF2 412 aa17.26■□□□□ 0.35
EIF4A1-218ENST00000581544 CDC42BPAQ5VT25 1732 aa17.25■□□□□ 0.35
EIF4A1-218ENST00000581544 CDK11AQ9UQ88 783 aaPredicted RBP17.25■□□□□ 0.35
EIF4A1-218ENST00000581544 ZCCHC11Q5TAX3 1644 aaKnown RBP17.25■□□□□ 0.35
EIF4A1-218ENST00000581544 ITSN2Q9NZM3 1697 aa17.24■□□□□ 0.35
EIF4A1-218ENST00000581544 PTPRKQ15262 1439 aa17.23■□□□□ 0.35
EIF4A1-218ENST00000581544 GPATCH8Q9UKJ3 1502 aaKnown RBP17.23■□□□□ 0.35
EIF4A1-218ENST00000581544 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.18■□□□□ 0.34
EIF4A1-218ENST00000581544 DNMT1P26358 1616 aaKnown RBP17.17■□□□□ 0.34
EIF4A1-218ENST00000581544 PLEKHD1A6NEE1 506 aa17.17■□□□□ 0.34
EIF4A1-218ENST00000581544 CDC42BPBQ9Y5S2 1711 aa17.17■□□□□ 0.34
EIF4A1-218ENST00000581544 FAM50AQ14320 339 aaKnown RBP17.16■□□□□ 0.34
EIF4A1-218ENST00000581544 PREX2Q70Z35 1606 aa17.16■□□□□ 0.34
EIF4A1-218ENST00000581544 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.15■□□□□ 0.342e-6■■■□□ 15.2
EIF4A1-218ENST00000581544 TTC37Q6PGP7 1564 aa17.14■□□□□ 0.34
EIF4A1-218ENST00000581544 AKNAQ7Z591 1439 aa17.13■□□□□ 0.33
EIF4A1-218ENST00000581544 SETD5Q9C0A6 1442 aa17.12■□□□□ 0.33
EIF4A1-218ENST00000581544 HFM1A2PYH4 1435 aa17.12■□□□□ 0.33
EIF4A1-218ENST00000581544 CAMSAP2Q08AD1 1489 aa17.12■□□□□ 0.33
EIF4A1-218ENST00000581544 CROCC2H7BZ55 1655 aa17.12■□□□□ 0.33
EIF4A1-218ENST00000581544 GCC2Q8IWJ2 1684 aa17.12■□□□□ 0.33
EIF4A1-218ENST00000581544 RAB3GAP2Q9H2M9 1393 aa17.11■□□□□ 0.33
EIF4A1-218ENST00000581544 ZEB1P37275 1124 aaPredicted RBP17.11■□□□□ 0.33
EIF4A1-218ENST00000581544 DHX57Q6P158 1386 aaKnown RBP17.1■□□□□ 0.33
EIF4A1-218ENST00000581544 ABCC5O15440 1437 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms