RNA–Protein interactions for RNA: ENST00000580997.1

SENP3-204, Transcript of SUMO specific peptidase 3, humanhuman

TSL 2

Gene SENP3, Length 679 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SENP3-204ENST00000580997 TRHP20396 242 aaPredicted RBP21.76■■□□□ 1.07
SENP3-204ENST00000580997 ERCC6L2Q5T890 1561 aa21.74■■□□□ 1.07
SENP3-204ENST00000580997 SHROOM2Q13796 1616 aa21.74■■□□□ 1.07
SENP3-204ENST00000580997 IGF1RP08069 1367 aa21.74■■□□□ 1.07
SENP3-204ENST00000580997 KIF27Q86VH2 1401 aa21.72■■□□□ 1.07
SENP3-204ENST00000580997 JPH4Q96JJ6 628 aa21.69■■□□□ 1.06
SENP3-204ENST00000580997 PIAS4Q8N2W9 510 aaPredicted RBP21.68■■□□□ 1.06
SENP3-204ENST00000580997 PRG4Q92954 1404 aaPredicted RBP21.64■■□□□ 1.06
SENP3-204ENST00000580997 RUSC2Q8N2Y8 1516 aa21.61■■□□□ 1.05
SENP3-204ENST00000580997 CUL7Q14999 1698 aa21.6■■□□□ 1.05
SENP3-204ENST00000580997 KIAA0586Q9BVV6 1533 aa21.58■■□□□ 1.04
SENP3-204ENST00000580997 CARMIL1Q5VZK9 1371 aa21.56■■□□□ 1.04
SENP3-204ENST00000580997 NPM1P06748 294 aaKnown RBP eCLIP21.37■■□□□ 1.01
SENP3-204ENST00000580997 RAPGEF2Q9Y4G8 1499 aa21.37■■□□□ 1.01
SENP3-204ENST00000580997 ADCY10Q96PN6 1610 aa21.34■■□□□ 1.01
SENP3-204ENST00000580997 PTPRGP23470 1445 aa21.34■■□□□ 1.01
SENP3-204ENST00000580997 CARMIL2Q6F5E8 1435 aa21.34■■□□□ 1.01
SENP3-204ENST00000580997 IQGAP2Q13576 1575 aa21.34■■□□□ 1.01
SENP3-204ENST00000580997 MAPKBP1O60336 1514 aa21.33■■□□□ 1
SENP3-204ENST00000580997 TNIKQ9UKE5 1360 aa21.32■■□□□ 1
SENP3-204ENST00000580997 ABCC10Q5T3U5 1492 aa21.29■■□□□ 1
SENP3-204ENST00000580997 KIF13AQ9H1H9 1805 aa21.28■■□□□ 1
SENP3-204ENST00000580997 DISP1Q96F81 1524 aa21.27■■□□□ 1
SENP3-204ENST00000580997 FAM69CQ0P6D2 419 aa21.26■□□□□ 0.99
SENP3-204ENST00000580997 UGGT2Q9NYU1 1516 aa21.25■□□□□ 0.99
SENP3-204ENST00000580997 PRXQ9BXM0 1461 aa21.22■□□□□ 0.99
SENP3-204ENST00000580997 UHRF1BP1LA0JNW5 1464 aa21.2■□□□□ 0.98
SENP3-204ENST00000580997 TTBK1Q5TCY1 1321 aaPredicted RBP21.2■□□□□ 0.98
SENP3-204ENST00000580997 ABCC2Q92887 1545 aa21.19■□□□□ 0.98
SENP3-204ENST00000580997 DIP2BQ9P265 1576 aa21.19■□□□□ 0.98
SENP3-204ENST00000580997 UACAQ9BZF9 1416 aa21.18■□□□□ 0.98
SENP3-204ENST00000580997 KIAA0556O60303 1618 aa21.14■□□□□ 0.97
SENP3-204ENST00000580997 ASXL2Q76L83 1435 aa21.11■□□□□ 0.97
SENP3-204ENST00000580997 CTTNBP2Q8WZ74 1663 aa21.1■□□□□ 0.97
SENP3-204ENST00000580997 PLB1Q6P1J6 1458 aa21.1■□□□□ 0.97
SENP3-204ENST00000580997 CSRNP3Q8WYN3 585 aa21.1■□□□□ 0.97
SENP3-204ENST00000580997 KDM5BQ9UGL1 1544 aa21.09■□□□□ 0.97
SENP3-204ENST00000580997 GOLGA3Q08378 1498 aa21.08■□□□□ 0.97
SENP3-204ENST00000580997 GLI2P10070 1586 aa21.04■□□□□ 0.96
SENP3-204ENST00000580997 EEA1Q15075 1411 aa21.03■□□□□ 0.96
SENP3-204ENST00000580997 ZCCHC11Q5TAX3 1644 aaKnown RBP20.98■□□□□ 0.95
SENP3-204ENST00000580997 EPRSP07814 1512 aaKnown RBP20.98■□□□□ 0.95
SENP3-204ENST00000580997 ABCA8O94911 1581 aa20.97■□□□□ 0.95
SENP3-204ENST00000580997 TSPOAP1O95153 1857 aa20.95■□□□□ 0.94
SENP3-204ENST00000580997 KDM6BO15054 1643 aa20.95■□□□□ 0.94
SENP3-204ENST00000580997 WDR7Q9Y4E6 1490 aa20.92■□□□□ 0.94
SENP3-204ENST00000580997 PPRC1Q5VV67 1664 aaKnown RBP20.92■□□□□ 0.94
SENP3-204ENST00000580997 PPP6R1Q9UPN7 881 aa20.91■□□□□ 0.94
SENP3-204ENST00000580997 FAM9AQ8IZU1 332 aaPredicted RBP20.9■□□□□ 0.94
SENP3-204ENST00000580997 MAP3K4Q9Y6R4 1608 aa20.89■□□□□ 0.94
SENP3-204ENST00000580997 P3H3Q8IVL6 736 aa20.89■□□□□ 0.93
SENP3-204ENST00000580997 SAMD9Q5K651 1589 aa20.88■□□□□ 0.93
SENP3-204ENST00000580997 TEX14Q8IWB6 1497 aa20.83■□□□□ 0.93
SENP3-204ENST00000580997 ATP10BO94823 1461 aa20.82■□□□□ 0.92
SENP3-204ENST00000580997 COL17A1Q9UMD9 1497 aaPredicted RBP20.82■□□□□ 0.92
SENP3-204ENST00000580997 KCNH8Q96L42 1107 aa20.81■□□□□ 0.92
SENP3-204ENST00000580997 KIF21BO75037 1637 aa20.8■□□□□ 0.92
SENP3-204ENST00000580997 CD109Q6YHK3 1445 aa20.78■□□□□ 0.92
SENP3-204ENST00000580997 MAGI3Q5TCQ9 1506 aa20.78■□□□□ 0.92
SENP3-204ENST00000580997 KDM4FA0A1W2PPD8 638 aa20.76■□□□□ 0.91
SENP3-204ENST00000580997 ADRA2BP18089 450 aa20.76■□□□□ 0.91
SENP3-204ENST00000580997 CFAP43Q8NDM7 1665 aa20.75■□□□□ 0.91
SENP3-204ENST00000580997 ARID3CA6NKF2 412 aa20.74■□□□□ 0.91
SENP3-204ENST00000580997 RANGAP1P46060 587 aaPredicted RBP20.73■□□□□ 0.91
SENP3-204ENST00000580997 RAPGEF6Q8TEU7 1601 aa20.73■□□□□ 0.91
SENP3-204ENST00000580997 FHOD3Q2V2M9 1422 aa20.72■□□□□ 0.91
SENP3-204ENST00000580997 NUP153P49790 1475 aaKnown RBP20.71■□□□□ 0.91
SENP3-204ENST00000580997 EFCAB5A4FU69 1503 aa20.7■□□□□ 0.9
SENP3-204ENST00000580997 UBTFP17480 764 aaKnown RBP20.65■□□□□ 0.9
SENP3-204ENST00000580997 ABCA9Q8IUA7 1624 aa20.64■□□□□ 0.9
SENP3-204ENST00000580997 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.64■□□□□ 0.89
SENP3-204ENST00000580997 HNRNPUL2Q1KMD3 747 aaKnown RBP20.64■□□□□ 0.89
SENP3-204ENST00000580997 ARAP3Q8WWN8 1544 aa20.63■□□□□ 0.89
SENP3-204ENST00000580997 PHLDB1Q86UU1 1377 aa20.62■□□□□ 0.89
SENP3-204ENST00000580997 PLEKHD1A6NEE1 506 aa20.6■□□□□ 0.89
SENP3-204ENST00000580997 EHMT2Q96KQ7 1210 aa20.58■□□□□ 0.89
SENP3-204ENST00000580997 ADGRL1O94910 1474 aa20.57■□□□□ 0.88
SENP3-204ENST00000580997 NEO1Q92859 1461 aa20.56■□□□□ 0.88
SENP3-204ENST00000580997 ARHGAP35Q9NRY4 1499 aa20.56■□□□□ 0.88
SENP3-204ENST00000580997 FMN1Q68DA7 1419 aa20.54■□□□□ 0.88
SENP3-204ENST00000580997 RAPGEF3O95398 923 aa20.48■□□□□ 0.87
SENP3-204ENST00000580997 CDK13Q14004 1512 aaKnown RBP20.48■□□□□ 0.87
SENP3-204ENST00000580997 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.48■□□□□ 0.87
SENP3-204ENST00000580997 HECW1Q76N89 1606 aa20.43■□□□□ 0.86
SENP3-204ENST00000580997 AKNAQ7Z591 1439 aa20.43■□□□□ 0.86
SENP3-204ENST00000580997 ATP1B4Q9UN42 357 aaPredicted RBP20.42■□□□□ 0.86
SENP3-204ENST00000580997 CDK11AQ9UQ88 783 aaPredicted RBP20.42■□□□□ 0.86
SENP3-204ENST00000580997 FANCAO15360 1455 aa20.42■□□□□ 0.86
SENP3-204ENST00000580997 TTC37Q6PGP7 1564 aa20.41■□□□□ 0.86
SENP3-204ENST00000580997 FRMPD1Q5SYB0 1578 aa20.4■□□□□ 0.86
SENP3-204ENST00000580997 PLCH2O75038 1416 aa20.39■□□□□ 0.85
SENP3-204ENST00000580997 PLPPR3Q6T4P5 718 aa20.39■□□□□ 0.85
SENP3-204ENST00000580997 DENND4BO75064 1496 aaPredicted RBP20.38■□□□□ 0.85
SENP3-204ENST00000580997 CFAP74Q9C0B2 1584 aa20.37■□□□□ 0.85
SENP3-204ENST00000580997 TROQ12816 1431 aaPredicted RBP20.34■□□□□ 0.85
SENP3-204ENST00000580997 CASKIN1Q8WXD9 1431 aa20.34■□□□□ 0.85
SENP3-204ENST00000580997 RICTORQ6R327 1708 aa20.33■□□□□ 0.85
SENP3-204ENST00000580997 EFCAB2Q5VUJ9 269 aa20.3■□□□□ 0.84
SENP3-204ENST00000580997 SCAPERQ9BY12 1400 aa20.29■□□□□ 0.84
SENP3-204ENST00000580997 LRRIQ1Q96JM4 1722 aa20.29■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms