RNA–Protein interactions for RNA: ENST00000580799.2

GGA3-210, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 5

Gene GGA3, Length 521 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-210ENST00000580799 AEBP2Q6ZN18 517 aaPredicted RBP18.17■□□□□ 0.5
GGA3-210ENST00000580799 CUL7Q14999 1698 aa18.15■□□□□ 0.5
GGA3-210ENST00000580799 KIF27Q86VH2 1401 aa18.12■□□□□ 0.49
GGA3-210ENST00000580799 KIAA0586Q9BVV6 1533 aa18.12■□□□□ 0.49
GGA3-210ENST00000580799 MAPKBP1O60336 1514 aa18.1■□□□□ 0.49
GGA3-210ENST00000580799 IGF1RP08069 1367 aa18.09■□□□□ 0.49
GGA3-210ENST00000580799 NPM1P06748 294 aaKnown RBP eCLIP18.08■□□□□ 0.48
GGA3-210ENST00000580799 ADCY10Q96PN6 1610 aa18.07■□□□□ 0.48
GGA3-210ENST00000580799 ABCC10Q5T3U5 1492 aa18.07■□□□□ 0.48
GGA3-210ENST00000580799 DIP2BQ9P265 1576 aa18.03■□□□□ 0.48
GGA3-210ENST00000580799 FAM69CQ0P6D2 419 aa18.01■□□□□ 0.47
GGA3-210ENST00000580799 CARMIL1Q5VZK9 1371 aa17.97■□□□□ 0.47
GGA3-210ENST00000580799 PTPRGP23470 1445 aa17.95■□□□□ 0.46
GGA3-210ENST00000580799 CARMIL2Q6F5E8 1435 aa17.95■□□□□ 0.46
GGA3-210ENST00000580799 IQGAP2Q13576 1575 aa17.94■□□□□ 0.46
GGA3-210ENST00000580799 KDM6BO15054 1643 aa17.91■□□□□ 0.46
GGA3-210ENST00000580799 TNIKQ9UKE5 1360 aa17.91■□□□□ 0.46
GGA3-210ENST00000580799 ABCC2Q92887 1545 aa17.89■□□□□ 0.45
GGA3-210ENST00000580799 TSPOAP1O95153 1857 aa17.87■□□□□ 0.45
GGA3-210ENST00000580799 UHRF1BP1LA0JNW5 1464 aa17.86■□□□□ 0.45
GGA3-210ENST00000580799 PLB1Q6P1J6 1458 aa17.84■□□□□ 0.45
GGA3-210ENST00000580799 DISP1Q96F81 1524 aa17.83■□□□□ 0.45
GGA3-210ENST00000580799 GLI2P10070 1586 aa17.83■□□□□ 0.44
GGA3-210ENST00000580799 RAPGEF2Q9Y4G8 1499 aa17.82■□□□□ 0.44
GGA3-210ENST00000580799 TTBK1Q5TCY1 1321 aaPredicted RBP17.82■□□□□ 0.44
GGA3-210ENST00000580799 UGGT2Q9NYU1 1516 aa17.82■□□□□ 0.44
GGA3-210ENST00000580799 ASXL2Q76L83 1435 aa17.81■□□□□ 0.44
GGA3-210ENST00000580799 UACAQ9BZF9 1416 aa17.81■□□□□ 0.44
GGA3-210ENST00000580799 KDM5BQ9UGL1 1544 aa17.77■□□□□ 0.43
GGA3-210ENST00000580799 PPRC1Q5VV67 1664 aaKnown RBP17.77■□□□□ 0.43
GGA3-210ENST00000580799 KIAA0556O60303 1618 aa17.76■□□□□ 0.43
GGA3-210ENST00000580799 CTTNBP2Q8WZ74 1663 aa17.74■□□□□ 0.43
GGA3-210ENST00000580799 ZCCHC11Q5TAX3 1644 aaKnown RBP17.73■□□□□ 0.43
GGA3-210ENST00000580799 MAP3K4Q9Y6R4 1608 aa17.72■□□□□ 0.43
GGA3-210ENST00000580799 EPRSP07814 1512 aaKnown RBP17.72■□□□□ 0.43
GGA3-210ENST00000580799 KDM4FA0A1W2PPD8 638 aa17.7■□□□□ 0.42
GGA3-210ENST00000580799 TEX14Q8IWB6 1497 aa17.69■□□□□ 0.42
GGA3-210ENST00000580799 GOLGA3Q08378 1498 aa17.68■□□□□ 0.42
GGA3-210ENST00000580799 WDR7Q9Y4E6 1490 aa17.64■□□□□ 0.41
GGA3-210ENST00000580799 PRXQ9BXM0 1461 aa17.61■□□□□ 0.41
GGA3-210ENST00000580799 COL17A1Q9UMD9 1497 aaPredicted RBP17.61■□□□□ 0.41
GGA3-210ENST00000580799 ABCA8O94911 1581 aa17.61■□□□□ 0.41
GGA3-210ENST00000580799 CFAP43Q8NDM7 1665 aa17.59■□□□□ 0.41
GGA3-210ENST00000580799 ADGRL1O94910 1474 aa17.59■□□□□ 0.41
GGA3-210ENST00000580799 MAGI3Q5TCQ9 1506 aa17.56■□□□□ 0.4
GGA3-210ENST00000580799 CD109Q6YHK3 1445 aa17.53■□□□□ 0.4
GGA3-210ENST00000580799 FAM9AQ8IZU1 332 aaPredicted RBP17.52■□□□□ 0.4
GGA3-210ENST00000580799 KCNH8Q96L42 1107 aa17.48■□□□□ 0.39
GGA3-210ENST00000580799 SAMD9Q5K651 1589 aa17.45■□□□□ 0.38
GGA3-210ENST00000580799 ATP10BO94823 1461 aa17.44■□□□□ 0.38
GGA3-210ENST00000580799 ARAP3Q8WWN8 1544 aa17.43■□□□□ 0.38
GGA3-210ENST00000580799 ABCA9Q8IUA7 1624 aa17.42■□□□□ 0.38
GGA3-210ENST00000580799 CSRNP3Q8WYN3 585 aa17.41■□□□□ 0.38
GGA3-210ENST00000580799 RAPGEF6Q8TEU7 1601 aa17.4■□□□□ 0.38
GGA3-210ENST00000580799 PHLDB1Q86UU1 1377 aa17.4■□□□□ 0.38
GGA3-210ENST00000580799 P3H3Q8IVL6 736 aa17.39■□□□□ 0.37
GGA3-210ENST00000580799 HECW2Q9P2P5 1572 aa17.39■□□□□ 0.37
GGA3-210ENST00000580799 EEA1Q15075 1411 aa17.38■□□□□ 0.37
GGA3-210ENST00000580799 KIF21BO75037 1637 aa17.37■□□□□ 0.37
GGA3-210ENST00000580799 ARID3CA6NKF2 412 aa17.36■□□□□ 0.37
GGA3-210ENST00000580799 NEO1Q92859 1461 aa17.34■□□□□ 0.37
GGA3-210ENST00000580799 NUP153P49790 1475 aaKnown RBP17.31■□□□□ 0.36
GGA3-210ENST00000580799 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.29■□□□□ 0.36
GGA3-210ENST00000580799 HNRNPUL2Q1KMD3 747 aaKnown RBP17.29■□□□□ 0.36
GGA3-210ENST00000580799 ILDR1Q86SU0 546 aaPredicted RBP17.28■□□□□ 0.36
GGA3-210ENST00000580799 EFCAB5A4FU69 1503 aa17.27■□□□□ 0.36
GGA3-210ENST00000580799 FHOD3Q2V2M9 1422 aa17.26■□□□□ 0.35
GGA3-210ENST00000580799 ADAMTSL3P82987 1691 aa17.26■□□□□ 0.35
GGA3-210ENST00000580799 FRMPD1Q5SYB0 1578 aa17.25■□□□□ 0.35
GGA3-210ENST00000580799 CFAP74Q9C0B2 1584 aa17.24■□□□□ 0.35
GGA3-210ENST00000580799 RAPGEF3O95398 923 aa17.24■□□□□ 0.35
GGA3-210ENST00000580799 PLEKHD1A6NEE1 506 aa17.22■□□□□ 0.35
GGA3-210ENST00000580799 PTPRMP28827 1452 aa17.21■□□□□ 0.35
GGA3-210ENST00000580799 RANGAP1P46060 587 aaPredicted RBP17.21■□□□□ 0.35
GGA3-210ENST00000580799 BCORL1Q5H9F3 1711 aa17.21■□□□□ 0.35
GGA3-210ENST00000580799 RICTORQ6R327 1708 aa17.2■□□□□ 0.34
GGA3-210ENST00000580799 ARHGEF40Q8TER5 1519 aa17.2■□□□□ 0.34
GGA3-210ENST00000580799 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.19■□□□□ 0.34
GGA3-210ENST00000580799 FANCAO15360 1455 aa17.18■□□□□ 0.34
GGA3-210ENST00000580799 DENND4BO75064 1496 aaPredicted RBP17.18■□□□□ 0.34
GGA3-210ENST00000580799 AKNAQ7Z591 1439 aa17.17■□□□□ 0.34
GGA3-210ENST00000580799 TTC37Q6PGP7 1564 aa17.16■□□□□ 0.34
GGA3-210ENST00000580799 MADDQ8WXG6 1647 aa17.16■□□□□ 0.34
GGA3-210ENST00000580799 ZMYM4Q5VZL5 1548 aa17.15■□□□□ 0.34
GGA3-210ENST00000580799 ARID4BQ4LE39 1312 aaPredicted RBP17.15■□□□□ 0.34
GGA3-210ENST00000580799 CDK13Q14004 1512 aaKnown RBP17.12■□□□□ 0.33
GGA3-210ENST00000580799 MAGI2Q86UL8 1455 aa17.12■□□□□ 0.33
GGA3-210ENST00000580799 FMN1Q68DA7 1419 aa17.11■□□□□ 0.33
GGA3-210ENST00000580799 HECW1Q76N89 1606 aa17.1■□□□□ 0.33
GGA3-210ENST00000580799 POGZQ7Z3K3 1410 aa17.1■□□□□ 0.33
GGA3-210ENST00000580799 ZFYVE16Q7Z3T8 1539 aa17.1■□□□□ 0.33
GGA3-210ENST00000580799 PCF11O94913 1555 aaKnown RBP17.1■□□□□ 0.33
GGA3-210ENST00000580799 RIMS1Q86UR5 1692 aaKnown RBP17.1■□□□□ 0.33
GGA3-210ENST00000580799 PLCH2O75038 1416 aa17.08■□□□□ 0.32
GGA3-210ENST00000580799 MYO5CQ9NQX4 1742 aa17.07■□□□□ 0.32
GGA3-210ENST00000580799 LMTK3Q96Q04 1460 aa17.06■□□□□ 0.32
GGA3-210ENST00000580799 UBTFP17480 764 aaKnown RBP17.06■□□□□ 0.32
GGA3-210ENST00000580799 ARHGAP35Q9NRY4 1499 aa17.05■□□□□ 0.32
GGA3-210ENST00000580799 YEATS2Q9ULM3 1422 aa17.04■□□□□ 0.32
GGA3-210ENST00000580799 CDK11AQ9UQ88 783 aaPredicted RBP17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 272.9 ms