RNA–Protein interactions for RNA: ENST00000580506.2

RN7SL543P-201, Transcript of RNA, 7SL, cytoplasmic 543, pseudogene, humanhuman

BASIC

Gene RN7SL543P, Length 299 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SL543P-201ENST00000580506 ERCC6L2Q5T890 1561 aa18.3■□□□□ 0.52
RN7SL543P-201ENST00000580506 SHROOM2Q13796 1616 aa18.28■□□□□ 0.52
RN7SL543P-201ENST00000580506 KIAA0586Q9BVV6 1533 aa18.27■□□□□ 0.51
RN7SL543P-201ENST00000580506 PRG4Q92954 1404 aaPredicted RBP18.25■□□□□ 0.51
RN7SL543P-201ENST00000580506 RAPGEF2Q9Y4G8 1499 aa18.25■□□□□ 0.51
RN7SL543P-201ENST00000580506 PRXQ9BXM0 1461 aa18.21■□□□□ 0.51
RN7SL543P-201ENST00000580506 CSRNP3Q8WYN3 585 aa18.21■□□□□ 0.51
RN7SL543P-201ENST00000580506 FAM9AQ8IZU1 332 aaPredicted RBP18.14■□□□□ 0.49
RN7SL543P-201ENST00000580506 EEA1Q15075 1411 aa18.12■□□□□ 0.49
RN7SL543P-201ENST00000580506 IQGAP2Q13576 1575 aa18.1■□□□□ 0.49
RN7SL543P-201ENST00000580506 DISP1Q96F81 1524 aa18.06■□□□□ 0.48
RN7SL543P-201ENST00000580506 UGGT2Q9NYU1 1516 aa18.04■□□□□ 0.48
RN7SL543P-201ENST00000580506 CARMIL2Q6F5E8 1435 aa18.04■□□□□ 0.48
RN7SL543P-201ENST00000580506 PTPRGP23470 1445 aa18.03■□□□□ 0.48
RN7SL543P-201ENST00000580506 TNIKQ9UKE5 1360 aa18.03■□□□□ 0.48
RN7SL543P-201ENST00000580506 TTBK1Q5TCY1 1321 aaPredicted RBP17.99■□□□□ 0.47
RN7SL543P-201ENST00000580506 TRHP20396 242 aaPredicted RBP17.99■□□□□ 0.47
RN7SL543P-201ENST00000580506 CTTNBP2Q8WZ74 1663 aa17.96■□□□□ 0.47
RN7SL543P-201ENST00000580506 ADCY10Q96PN6 1610 aa17.94■□□□□ 0.46
RN7SL543P-201ENST00000580506 KIAA0556O60303 1618 aa17.93■□□□□ 0.46
RN7SL543P-201ENST00000580506 KIF21BO75037 1637 aa17.92■□□□□ 0.46
RN7SL543P-201ENST00000580506 EHMT2Q96KQ7 1210 aa17.91■□□□□ 0.46
RN7SL543P-201ENST00000580506 GOLGA3Q08378 1498 aa17.9■□□□□ 0.46
RN7SL543P-201ENST00000580506 NPM1P06748 294 aaKnown RBP eCLIP17.9■□□□□ 0.46
RN7SL543P-201ENST00000580506 P3H3Q8IVL6 736 aa17.9■□□□□ 0.46
RN7SL543P-201ENST00000580506 UACAQ9BZF9 1416 aa17.89■□□□□ 0.46
RN7SL543P-201ENST00000580506 UHRF1BP1LA0JNW5 1464 aa17.88■□□□□ 0.45
RN7SL543P-201ENST00000580506 UBTFP17480 764 aaKnown RBP17.85■□□□□ 0.45
RN7SL543P-201ENST00000580506 RANGAP1P46060 587 aaPredicted RBP17.85■□□□□ 0.45
RN7SL543P-201ENST00000580506 ABCC2Q92887 1545 aa17.84■□□□□ 0.45
RN7SL543P-201ENST00000580506 PLB1Q6P1J6 1458 aa17.83■□□□□ 0.45
RN7SL543P-201ENST00000580506 MAPKBP1O60336 1514 aa17.82■□□□□ 0.44
RN7SL543P-201ENST00000580506 SAMD9Q5K651 1589 aa17.81■□□□□ 0.44
RN7SL543P-201ENST00000580506 KDM5BQ9UGL1 1544 aa17.8■□□□□ 0.44
RN7SL543P-201ENST00000580506 ABCA8O94911 1581 aa17.79■□□□□ 0.44
RN7SL543P-201ENST00000580506 ABCC10Q5T3U5 1492 aa17.78■□□□□ 0.44
RN7SL543P-201ENST00000580506 FAM69CQ0P6D2 419 aa17.78■□□□□ 0.44
RN7SL543P-201ENST00000580506 FHOD3Q2V2M9 1422 aa17.75■□□□□ 0.43
RN7SL543P-201ENST00000580506 ASXL2Q76L83 1435 aa17.75■□□□□ 0.43
RN7SL543P-201ENST00000580506 KIF13AQ9H1H9 1805 aa17.72■□□□□ 0.43
RN7SL543P-201ENST00000580506 DIP2BQ9P265 1576 aa17.7■□□□□ 0.42
RN7SL543P-201ENST00000580506 ZCCHC11Q5TAX3 1644 aaKnown RBP17.69■□□□□ 0.42
RN7SL543P-201ENST00000580506 EFCAB5A4FU69 1503 aa17.69■□□□□ 0.42
RN7SL543P-201ENST00000580506 ARID3CA6NKF2 412 aa17.69■□□□□ 0.42
RN7SL543P-201ENST00000580506 ATP10BO94823 1461 aa17.69■□□□□ 0.42
RN7SL543P-201ENST00000580506 ARHGAP35Q9NRY4 1499 aa17.69■□□□□ 0.42
RN7SL543P-201ENST00000580506 EPRSP07814 1512 aaKnown RBP17.64■□□□□ 0.41
RN7SL543P-201ENST00000580506 NUP153P49790 1475 aaKnown RBP17.63■□□□□ 0.41
RN7SL543P-201ENST00000580506 WDR7Q9Y4E6 1490 aa17.63■□□□□ 0.41
RN7SL543P-201ENST00000580506 GLI2P10070 1586 aa17.62■□□□□ 0.41
RN7SL543P-201ENST00000580506 RAPGEF6Q8TEU7 1601 aa17.62■□□□□ 0.41
RN7SL543P-201ENST00000580506 KCNH8Q96L42 1107 aa17.62■□□□□ 0.41
RN7SL543P-201ENST00000580506 LOC105371045A0A1W2PR82 267 aa17.6■□□□□ 0.41
RN7SL543P-201ENST00000580506 FMN1Q68DA7 1419 aa17.56■□□□□ 0.4
RN7SL543P-201ENST00000580506 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.55■□□□□ 0.4
RN7SL543P-201ENST00000580506 HNRNPUL2Q1KMD3 747 aaKnown RBP17.55■□□□□ 0.4
RN7SL543P-201ENST00000580506 CLIP1P30622 1438 aa17.55■□□□□ 0.4
RN7SL543P-201ENST00000580506 PPRC1Q5VV67 1664 aaKnown RBP17.52■□□□□ 0.39
RN7SL543P-201ENST00000580506 MAP3K4Q9Y6R4 1608 aa17.51■□□□□ 0.39
RN7SL543P-201ENST00000580506 PLEKHD1A6NEE1 506 aa17.51■□□□□ 0.39
RN7SL543P-201ENST00000580506 TSPOAP1O95153 1857 aa17.51■□□□□ 0.39
RN7SL543P-201ENST00000580506 ATP1B4Q9UN42 357 aaPredicted RBP17.51■□□□□ 0.39
RN7SL543P-201ENST00000580506 CD109Q6YHK3 1445 aa17.49■□□□□ 0.39
RN7SL543P-201ENST00000580506 CDK13Q14004 1512 aaKnown RBP17.49■□□□□ 0.39
RN7SL543P-201ENST00000580506 COL17A1Q9UMD9 1497 aaPredicted RBP17.47■□□□□ 0.39
RN7SL543P-201ENST00000580506 CASKIN1Q8WXD9 1431 aa17.47■□□□□ 0.39
RN7SL543P-201ENST00000580506 CEP162Q5TB80 1403 aa17.46■□□□□ 0.39
RN7SL543P-201ENST00000580506 MAGI3Q5TCQ9 1506 aa17.45■□□□□ 0.38
RN7SL543P-201ENST00000580506 HECW1Q76N89 1606 aa17.43■□□□□ 0.38
RN7SL543P-201ENST00000580506 ABCA9Q8IUA7 1624 aa17.42■□□□□ 0.38
RN7SL543P-201ENST00000580506 TEX14Q8IWB6 1497 aa17.42■□□□□ 0.38
RN7SL543P-201ENST00000580506 CFAP43Q8NDM7 1665 aa17.42■□□□□ 0.38
RN7SL543P-201ENST00000580506 KDM6BO15054 1643 aa17.4■□□□□ 0.38
RN7SL543P-201ENST00000580506 PCF11O94913 1555 aaKnown RBP17.4■□□□□ 0.38
RN7SL543P-201ENST00000580506 CDK11AQ9UQ88 783 aaPredicted RBP17.39■□□□□ 0.37
RN7SL543P-201ENST00000580506 LRRIQ1Q96JM4 1722 aa17.38■□□□□ 0.37
RN7SL543P-201ENST00000580506 FYCO1Q9BQS8 1478 aa17.37■□□□□ 0.37
RN7SL543P-201ENST00000580506 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.37■□□□□ 0.37
RN7SL543P-201ENST00000580506 TROQ12816 1431 aaPredicted RBP17.35■□□□□ 0.37
RN7SL543P-201ENST00000580506 CCDC18Q5T9S5 1454 aa17.32■□□□□ 0.36
RN7SL543P-201ENST00000580506 TTC37Q6PGP7 1564 aa17.32■□□□□ 0.36
RN7SL543P-201ENST00000580506 ARAP3Q8WWN8 1544 aa17.31■□□□□ 0.36
RN7SL543P-201ENST00000580506 PHLDB1Q86UU1 1377 aa17.31■□□□□ 0.36
RN7SL543P-201ENST00000580506 NEO1Q92859 1461 aa17.3■□□□□ 0.36
RN7SL543P-201ENST00000580506 PLCH2O75038 1416 aa17.3■□□□□ 0.36
RN7SL543P-201ENST00000580506 KIF14Q15058 1648 aa17.29■□□□□ 0.36
RN7SL543P-201ENST00000580506 RAPGEF3O95398 923 aa17.28■□□□□ 0.36
RN7SL543P-201ENST00000580506 AKNAQ7Z591 1439 aa17.27■□□□□ 0.35
RN7SL543P-201ENST00000580506 FANCAO15360 1455 aa17.25■□□□□ 0.35
RN7SL543P-201ENST00000580506 VPS8Q8N3P4 1428 aa17.24■□□□□ 0.35
RN7SL543P-201ENST00000580506 EFCAB2Q5VUJ9 269 aa17.24■□□□□ 0.35
RN7SL543P-201ENST00000580506 KDM4FA0A1W2PPD8 638 aa17.19■□□□□ 0.34
RN7SL543P-201ENST00000580506 DENND4BO75064 1496 aaPredicted RBP17.18■□□□□ 0.34
RN7SL543P-201ENST00000580506 MTUS2Q5JR59 1369 aa17.18■□□□□ 0.34
RN7SL543P-201ENST00000580506 SCAPERQ9BY12 1400 aa17.18■□□□□ 0.34
RN7SL543P-201ENST00000580506 FRMPD1Q5SYB0 1578 aa17.18■□□□□ 0.34
RN7SL543P-201ENST00000580506 GPATCH8Q9UKJ3 1502 aaKnown RBP17.16■□□□□ 0.34
RN7SL543P-201ENST00000580506 ADGRL1O94910 1474 aa17.15■□□□□ 0.34
RN7SL543P-201ENST00000580506 MYO5CQ9NQX4 1742 aa17.15■□□□□ 0.34
RN7SL543P-201ENST00000580506 ARHGAP5Q13017 1502 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms