RNA–Protein interactions for RNA: ENST00000580446.1

CSNK1D-213, Transcript of casein kinase 1 delta, humanhuman

TSL 3

Gene CSNK1D, Length 612 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-213ENST00000580446 ADGRL1O94910 1474 aa26.48■■□□□ 1.83
CSNK1D-213ENST00000580446 NPM1P06748 294 aaKnown RBP eCLIP26.46■■□□□ 1.83
CSNK1D-213ENST00000580446 TSPOAP1O95153 1857 aa26.43■■□□□ 1.82
CSNK1D-213ENST00000580446 MAPKBP1O60336 1514 aa26.42■■□□□ 1.82
CSNK1D-213ENST00000580446 JPH4Q96JJ6 628 aa26.36■■□□□ 1.81
CSNK1D-213ENST00000580446 ADCY10Q96PN6 1610 aa26.36■■□□□ 1.81
CSNK1D-213ENST00000580446 FHAD1B1AJZ9 1412 aa26.35■■□□□ 1.81
CSNK1D-213ENST00000580446 FBXO41Q8TF61 875 aa26.27■■□□□ 1.8
CSNK1D-213ENST00000580446 WRNQ14191 1432 aaPredicted RBP eCLIP26.18■■□□□ 1.785e-6■■■■■ 38.2
CSNK1D-213ENST00000580446 TTBK1Q5TCY1 1321 aaPredicted RBP26.17■■□□□ 1.78
CSNK1D-213ENST00000580446 RUSC2Q8N2Y8 1516 aa26.15■■□□□ 1.78
CSNK1D-213ENST00000580446 COL17A1Q9UMD9 1497 aaPredicted RBP26.15■■□□□ 1.78
CSNK1D-213ENST00000580446 ERICH3Q5RHP9 1530 aa26.09■■□□□ 1.77
CSNK1D-213ENST00000580446 PPRC1Q5VV67 1664 aaKnown RBP26.09■■□□□ 1.77
CSNK1D-213ENST00000580446 LMTK3Q96Q04 1460 aa26.02■■□□□ 1.76
CSNK1D-213ENST00000580446 ASXL2Q76L83 1435 aa26■■□□□ 1.75
CSNK1D-213ENST00000580446 PTPRGP23470 1445 aa25.92■■□□□ 1.74
CSNK1D-213ENST00000580446 GLI2P10070 1586 aa25.9■■□□□ 1.74
CSNK1D-213ENST00000580446 ABCC2Q92887 1545 aa25.89■■□□□ 1.74
CSNK1D-213ENST00000580446 TOP2BQ02880 1626 aa25.89■■□□□ 1.74
CSNK1D-213ENST00000580446 BIVM-ERCC5R4GMW8 1640 aa25.88■■□□□ 1.73
CSNK1D-213ENST00000580446 PLB1Q6P1J6 1458 aa25.87■■□□□ 1.73
CSNK1D-213ENST00000580446 ILDR2Q71H61 639 aa25.86■■□□□ 1.73
CSNK1D-213ENST00000580446 KIAA0586Q9BVV6 1533 aa25.84■■□□□ 1.73
CSNK1D-213ENST00000580446 EPRSP07814 1512 aaKnown RBP25.8■■□□□ 1.72
CSNK1D-213ENST00000580446 CUL7Q14999 1698 aa25.8■■□□□ 1.72
CSNK1D-213ENST00000580446 MAP3K4Q9Y6R4 1608 aa25.77■■□□□ 1.72
CSNK1D-213ENST00000580446 TEX14Q8IWB6 1497 aa25.75■■□□□ 1.71
CSNK1D-213ENST00000580446 TNIKQ9UKE5 1360 aa25.73■■□□□ 1.71
CSNK1D-213ENST00000580446 SOCS7O14512 581 aa25.72■■□□□ 1.71
CSNK1D-213ENST00000580446 DISP3Q9P2K9 1392 aa25.69■■□□□ 1.7
CSNK1D-213ENST00000580446 KIF21BO75037 1637 aa25.68■■□□□ 1.7
CSNK1D-213ENST00000580446 UACAQ9BZF9 1416 aa25.65■■□□□ 1.7
CSNK1D-213ENST00000580446 UHRF1BP1LA0JNW5 1464 aa25.64■■□□□ 1.69
CSNK1D-213ENST00000580446 CARMIL2Q6F5E8 1435 aa25.62■■□□□ 1.69
CSNK1D-213ENST00000580446 PTPRMP28827 1452 aa25.6■■□□□ 1.69
CSNK1D-213ENST00000580446 IGF1RP08069 1367 aa25.6■■□□□ 1.69
CSNK1D-213ENST00000580446 KDM5BQ9UGL1 1544 aa25.58■■□□□ 1.68
CSNK1D-213ENST00000580446 ZCCHC11Q5TAX3 1644 aaKnown RBP25.56■■□□□ 1.68
CSNK1D-213ENST00000580446 HSPA2P54652 639 aa25.52■■□□□ 1.68
CSNK1D-213ENST00000580446 PCF11O94913 1555 aaKnown RBP25.52■■□□□ 1.68
CSNK1D-213ENST00000580446 SUPT5HO00267 1087 aaKnown RBP25.5■■□□□ 1.67
CSNK1D-213ENST00000580446 KCNH8Q96L42 1107 aa25.5■■□□□ 1.67
CSNK1D-213ENST00000580446 WDR7Q9Y4E6 1490 aa25.5■■□□□ 1.67
CSNK1D-213ENST00000580446 DISP1Q96F81 1524 aa25.49■■□□□ 1.67
CSNK1D-213ENST00000580446 CD109Q6YHK3 1445 aa25.49■■□□□ 1.67
CSNK1D-213ENST00000580446 CERKQ8TCT0 537 aa25.48■■□□□ 1.67
CSNK1D-213ENST00000580446 PLPPR3Q6T4P5 718 aa25.45■■□□□ 1.66
CSNK1D-213ENST00000580446 IQGAP2Q13576 1575 aa25.44■■□□□ 1.66
CSNK1D-213ENST00000580446 ADAMTSL3P82987 1691 aa25.44■■□□□ 1.66
CSNK1D-213ENST00000580446 MAGI3Q5TCQ9 1506 aa25.43■■□□□ 1.66
CSNK1D-213ENST00000580446 KIF27Q86VH2 1401 aa25.4■■□□□ 1.66
CSNK1D-213ENST00000580446 CARMIL1Q5VZK9 1371 aa25.4■■□□□ 1.66
CSNK1D-213ENST00000580446 MADDQ8WXG6 1647 aa25.37■■□□□ 1.65
CSNK1D-213ENST00000580446 ARID4BQ4LE39 1312 aaPredicted RBP25.35■■□□□ 1.65
CSNK1D-213ENST00000580446 CFAP43Q8NDM7 1665 aa25.32■■□□□ 1.64
CSNK1D-213ENST00000580446 SPATA31D1Q6ZQQ2 1576 aa25.31■■□□□ 1.64
CSNK1D-213ENST00000580446 RAPGEF3O95398 923 aa25.3■■□□□ 1.64
CSNK1D-213ENST00000580446 ARID3CA6NKF2 412 aa25.26■■□□□ 1.63
CSNK1D-213ENST00000580446 ARAP3Q8WWN8 1544 aa25.26■■□□□ 1.63
CSNK1D-213ENST00000580446 KIAA0556O60303 1618 aa25.26■■□□□ 1.63
CSNK1D-213ENST00000580446 BCORL1Q5H9F3 1711 aa25.26■■□□□ 1.63
CSNK1D-213ENST00000580446 RIMS1Q86UR5 1692 aaKnown RBP25.23■■□□□ 1.63
CSNK1D-213ENST00000580446 UGGT2Q9NYU1 1516 aa25.22■■□□□ 1.63
CSNK1D-213ENST00000580446 FRMPD1Q5SYB0 1578 aa25.1■■□□□ 1.61
CSNK1D-213ENST00000580446 ABCA8O94911 1581 aa25.09■■□□□ 1.61
CSNK1D-213ENST00000580446 MLECQ14165 292 aa25.04■■□□□ 1.6
CSNK1D-213ENST00000580446 ARHGEF40Q8TER5 1519 aa24.99■■□□□ 1.59
CSNK1D-213ENST00000580446 RAPGEF2Q9Y4G8 1499 aa24.99■■□□□ 1.59
CSNK1D-213ENST00000580446 PHLDB1Q86UU1 1377 aa24.96■■□□□ 1.59
CSNK1D-213ENST00000580446 NEO1Q92859 1461 aa24.95■■□□□ 1.58
CSNK1D-213ENST00000580446 ABCA9Q8IUA7 1624 aa24.94■■□□□ 1.58
CSNK1D-213ENST00000580446 SIGLEC1Q9BZZ2 1709 aa24.94■■□□□ 1.58
CSNK1D-213ENST00000580446 ATP10BO94823 1461 aa24.94■■□□□ 1.58
CSNK1D-213ENST00000580446 CEBPAP49715 358 aaPredicted RBP24.9■■□□□ 1.58
CSNK1D-213ENST00000580446 YEATS2Q9ULM3 1422 aa24.89■■□□□ 1.58
CSNK1D-213ENST00000580446 P3H3Q8IVL6 736 aa24.89■■□□□ 1.58
CSNK1D-213ENST00000580446 FANCAO15360 1455 aa24.87■■□□□ 1.57
CSNK1D-213ENST00000580446 POGZQ7Z3K3 1410 aa24.86■■□□□ 1.57
CSNK1D-213ENST00000580446 GOLGA3Q08378 1498 aa24.86■■□□□ 1.57
CSNK1D-213ENST00000580446 DENND4BO75064 1496 aaPredicted RBP24.84■■□□□ 1.57
CSNK1D-213ENST00000580446 STRCQ7RTU9 1775 aa24.83■■□□□ 1.57
CSNK1D-213ENST00000580446 AKNAQ7Z591 1439 aa24.83■■□□□ 1.57
CSNK1D-213ENST00000580446 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.81■■□□□ 1.56
CSNK1D-213ENST00000580446 HNRNPUL2Q1KMD3 747 aaKnown RBP24.81■■□□□ 1.56
CSNK1D-213ENST00000580446 DMRT2Q9Y5R5 561 aa24.81■■□□□ 1.56
CSNK1D-213ENST00000580446 TTC37Q6PGP7 1564 aa24.8■■□□□ 1.56
CSNK1D-213ENST00000580446 FER1L4A9Z1Z3 1794 aa24.8■■□□□ 1.56
CSNK1D-213ENST00000580446 RICTORQ6R327 1708 aa24.78■■□□□ 1.56
CSNK1D-213ENST00000580446 ZFYVE16Q7Z3T8 1539 aa24.78■■□□□ 1.56
CSNK1D-213ENST00000580446 PREX1Q8TCU6 1659 aa24.77■■□□□ 1.56
CSNK1D-213ENST00000580446 FHOD3Q2V2M9 1422 aa24.76■■□□□ 1.55
CSNK1D-213ENST00000580446 CTTNBP2Q8WZ74 1663 aa24.75■■□□□ 1.55
CSNK1D-213ENST00000580446 LTBP4Q8N2S1 1624 aa24.74■■□□□ 1.55
CSNK1D-213ENST00000580446 UHRF1BP1Q6BDS2 1440 aa24.69■■□□□ 1.54
CSNK1D-213ENST00000580446 ZMYM4Q5VZL5 1548 aa24.68■■□□□ 1.54
CSNK1D-213ENST00000580446 ARHGEF12Q9NZN5 1544 aa24.68■■□□□ 1.54
CSNK1D-213ENST00000580446 EFCAB5A4FU69 1503 aa24.67■■□□□ 1.54
CSNK1D-213ENST00000580446 PTPRTO14522 1441 aa24.67■■□□□ 1.54
CSNK1D-213ENST00000580446 UBAP1LF5GYI3 381 aa24.66■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms