RNA–Protein interactions for RNA: ENST00000580175.1

LINC00511-207, long intergenic non-protein coding RNA 511, humanhuman

TSL 3

Gene LINC00511, Length 436 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00511-207ENST00000580175 CARMIL1Q5VZK9 1371 aa12.88□□□□□ -0.35
LINC00511-207ENST00000580175 PRG4Q92954 1404 aaPredicted RBP12.87□□□□□ -0.35
LINC00511-207ENST00000580175 KIAA0586Q9BVV6 1533 aa12.83□□□□□ -0.35
LINC00511-207ENST00000580175 TRHP20396 242 aaPredicted RBP12.83□□□□□ -0.36
LINC00511-207ENST00000580175 RAPGEF2Q9Y4G8 1499 aa12.77□□□□□ -0.37
LINC00511-207ENST00000580175 IQGAP2Q13576 1575 aa12.73□□□□□ -0.37
LINC00511-207ENST00000580175 PRXQ9BXM0 1461 aa12.71□□□□□ -0.38
LINC00511-207ENST00000580175 ADCY10Q96PN6 1610 aa12.7□□□□□ -0.38
LINC00511-207ENST00000580175 DISP1Q96F81 1524 aa12.69□□□□□ -0.38
LINC00511-207ENST00000580175 TTBK1Q5TCY1 1321 aaPredicted RBP12.68□□□□□ -0.38
LINC00511-207ENST00000580175 PTPRGP23470 1445 aa12.68□□□□□ -0.38
LINC00511-207ENST00000580175 TNIKQ9UKE5 1360 aa12.68□□□□□ -0.38
LINC00511-207ENST00000580175 CARMIL2Q6F5E8 1435 aa12.67□□□□□ -0.38
LINC00511-207ENST00000580175 UGGT2Q9NYU1 1516 aa12.67□□□□□ -0.38
LINC00511-207ENST00000580175 CSRNP3Q8WYN3 585 aa12.65□□□□□ -0.38
LINC00511-207ENST00000580175 CTTNBP2Q8WZ74 1663 aa12.64□□□□□ -0.39
LINC00511-207ENST00000580175 KIF13AQ9H1H9 1805 aa12.63□□□□□ -0.39
LINC00511-207ENST00000580175 NPM1P06748 294 aaKnown RBP eCLIP12.63□□□□□ -0.39
LINC00511-207ENST00000580175 KIAA0556O60303 1618 aa12.62□□□□□ -0.39
LINC00511-207ENST00000580175 CHIC1Q5VXU3 224 aa12.62□□□□□ -0.39
LINC00511-207ENST00000580175 MAPKBP1O60336 1514 aa12.62□□□□□ -0.39
LINC00511-207ENST00000580175 FAM9AQ8IZU1 332 aaPredicted RBP12.6□□□□□ -0.39
LINC00511-207ENST00000580175 EEA1Q15075 1411 aa12.6□□□□□ -0.39
LINC00511-207ENST00000580175 UACAQ9BZF9 1416 aa12.6□□□□□ -0.39
LINC00511-207ENST00000580175 ABCC10Q5T3U5 1492 aa12.59□□□□□ -0.39
LINC00511-207ENST00000580175 UHRF1BP1LA0JNW5 1464 aa12.59□□□□□ -0.39
LINC00511-207ENST00000580175 ABCC2Q92887 1545 aa12.58□□□□□ -0.4
LINC00511-207ENST00000580175 FAM69CQ0P6D2 419 aa12.58□□□□□ -0.4
LINC00511-207ENST00000580175 DIP2BQ9P265 1576 aa12.58□□□□□ -0.4
LINC00511-207ENST00000580175 GOLGA3Q08378 1498 aa12.55□□□□□ -0.4
LINC00511-207ENST00000580175 ASXL2Q76L83 1435 aa12.54□□□□□ -0.4
LINC00511-207ENST00000580175 PLB1Q6P1J6 1458 aa12.53□□□□□ -0.4
LINC00511-207ENST00000580175 KDM5BQ9UGL1 1544 aa12.53□□□□□ -0.4
LINC00511-207ENST00000580175 P3H3Q8IVL6 736 aa12.53□□□□□ -0.4
LINC00511-207ENST00000580175 ABCA8O94911 1581 aa12.51□□□□□ -0.41
LINC00511-207ENST00000580175 ZCCHC11Q5TAX3 1644 aaKnown RBP12.51□□□□□ -0.41
LINC00511-207ENST00000580175 KIF21BO75037 1637 aa12.5□□□□□ -0.41
LINC00511-207ENST00000580175 SAMD9Q5K651 1589 aa12.49□□□□□ -0.41
LINC00511-207ENST00000580175 TSPOAP1O95153 1857 aa12.48□□□□□ -0.41
LINC00511-207ENST00000580175 RANGAP1P46060 587 aaPredicted RBP12.47□□□□□ -0.41
LINC00511-207ENST00000580175 EHMT2Q96KQ7 1210 aa12.47□□□□□ -0.41
LINC00511-207ENST00000580175 GLI2P10070 1586 aa12.47□□□□□ -0.41
LINC00511-207ENST00000580175 EPRSP07814 1512 aaKnown RBP12.46□□□□□ -0.42
LINC00511-207ENST00000580175 PPRC1Q5VV67 1664 aaKnown RBP12.45□□□□□ -0.42
LINC00511-207ENST00000580175 WDR7Q9Y4E6 1490 aa12.43□□□□□ -0.42
LINC00511-207ENST00000580175 ARID3CA6NKF2 412 aa12.43□□□□□ -0.42
LINC00511-207ENST00000580175 FHOD3Q2V2M9 1422 aa12.43□□□□□ -0.42
LINC00511-207ENST00000580175 ATP10BO94823 1461 aa12.41□□□□□ -0.42
LINC00511-207ENST00000580175 MAP3K4Q9Y6R4 1608 aa12.4□□□□□ -0.42
LINC00511-207ENST00000580175 UBTFP17480 764 aaKnown RBP12.4□□□□□ -0.42
LINC00511-207ENST00000580175 KCNH8Q96L42 1107 aa12.39□□□□□ -0.43
LINC00511-207ENST00000580175 KDM6BO15054 1643 aa12.39□□□□□ -0.43
LINC00511-207ENST00000580175 RAPGEF6Q8TEU7 1601 aa12.39□□□□□ -0.43
LINC00511-207ENST00000580175 EFCAB5A4FU69 1503 aa12.37□□□□□ -0.43
LINC00511-207ENST00000580175 NUP153P49790 1475 aaKnown RBP12.37□□□□□ -0.43
LINC00511-207ENST00000580175 COL17A1Q9UMD9 1497 aaPredicted RBP12.37□□□□□ -0.43
LINC00511-207ENST00000580175 ARHGAP35Q9NRY4 1499 aa12.34□□□□□ -0.43
LINC00511-207ENST00000580175 CD109Q6YHK3 1445 aa12.34□□□□□ -0.43
LINC00511-207ENST00000580175 CFAP43Q8NDM7 1665 aa12.32□□□□□ -0.44
LINC00511-207ENST00000580175 TEX14Q8IWB6 1497 aa12.32□□□□□ -0.44
LINC00511-207ENST00000580175 MAGI3Q5TCQ9 1506 aa12.32□□□□□ -0.44
LINC00511-207ENST00000580175 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.31□□□□□ -0.44
LINC00511-207ENST00000580175 HNRNPUL2Q1KMD3 747 aaKnown RBP12.31□□□□□ -0.44
LINC00511-207ENST00000580175 ABCA9Q8IUA7 1624 aa12.28□□□□□ -0.44
LINC00511-207ENST00000580175 CDK13Q14004 1512 aaKnown RBP12.27□□□□□ -0.44
LINC00511-207ENST00000580175 PLEKHD1A6NEE1 506 aa12.26□□□□□ -0.45
LINC00511-207ENST00000580175 AEBP2Q6ZN18 517 aaPredicted RBP12.26□□□□□ -0.45
LINC00511-207ENST00000580175 FMN1Q68DA7 1419 aa12.26□□□□□ -0.45
LINC00511-207ENST00000580175 KDM4FA0A1W2PPD8 638 aa12.25□□□□□ -0.45
LINC00511-207ENST00000580175 ATP1B4Q9UN42 357 aaPredicted RBP12.24□□□□□ -0.45
LINC00511-207ENST00000580175 HECW1Q76N89 1606 aa12.22□□□□□ -0.45
LINC00511-207ENST00000580175 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.22□□□□□ -0.45
LINC00511-207ENST00000580175 LRRIQ1Q96JM4 1722 aa12.21□□□□□ -0.45
LINC00511-207ENST00000580175 ARAP3Q8WWN8 1544 aa12.21□□□□□ -0.46
LINC00511-207ENST00000580175 TTC37Q6PGP7 1564 aa12.2□□□□□ -0.46
LINC00511-207ENST00000580175 CLIP1P30622 1438 aa12.2□□□□□ -0.46
LINC00511-207ENST00000580175 NEO1Q92859 1461 aa12.19□□□□□ -0.46
LINC00511-207ENST00000580175 PHLDB1Q86UU1 1377 aa12.18□□□□□ -0.46
LINC00511-207ENST00000580175 PCF11O94913 1555 aaKnown RBP12.18□□□□□ -0.46
LINC00511-207ENST00000580175 RAPGEF3O95398 923 aa12.18□□□□□ -0.46
LINC00511-207ENST00000580175 CASKIN1Q8WXD9 1431 aa12.17□□□□□ -0.46
LINC00511-207ENST00000580175 FRMPD1Q5SYB0 1578 aa12.16□□□□□ -0.46
LINC00511-207ENST00000580175 ADGRL1O94910 1474 aa12.15□□□□□ -0.46
LINC00511-207ENST00000580175 TROQ12816 1431 aaPredicted RBP12.15□□□□□ -0.46
LINC00511-207ENST00000580175 AKNAQ7Z591 1439 aa12.15□□□□□ -0.46
LINC00511-207ENST00000580175 KIF14Q15058 1648 aa12.15□□□□□ -0.47
LINC00511-207ENST00000580175 FANCAO15360 1455 aa12.14□□□□□ -0.47
LINC00511-207ENST00000580175 CDK11AQ9UQ88 783 aaPredicted RBP12.14□□□□□ -0.47
LINC00511-207ENST00000580175 PLCH2O75038 1416 aa12.13□□□□□ -0.47
LINC00511-207ENST00000580175 LOC105371045A0A1W2PR82 267 aa12.13□□□□□ -0.47
LINC00511-207ENST00000580175 DENND4BO75064 1496 aaPredicted RBP12.12□□□□□ -0.47
LINC00511-207ENST00000580175 FYCO1Q9BQS8 1478 aa12.12□□□□□ -0.47
LINC00511-207ENST00000580175 CCDC18Q5T9S5 1454 aa12.11□□□□□ -0.47
LINC00511-207ENST00000580175 RICTORQ6R327 1708 aa12.11□□□□□ -0.47
LINC00511-207ENST00000580175 CEP162Q5TB80 1403 aa12.11□□□□□ -0.47
LINC00511-207ENST00000580175 CFAP74Q9C0B2 1584 aa12.09□□□□□ -0.47
LINC00511-207ENST00000580175 MYO5CQ9NQX4 1742 aa12.09□□□□□ -0.47
LINC00511-207ENST00000580175 SCAPERQ9BY12 1400 aa12.08□□□□□ -0.48
LINC00511-207ENST00000580175 EFCAB2Q5VUJ9 269 aa12.07□□□□□ -0.48
LINC00511-207ENST00000580175 CDC42BPBQ9Y5S2 1711 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms