RNA–Protein interactions for RNA: ENST00000579339.5

LINC00271-205, long intergenic non-protein coding RNA 271, humanhuman

TSL 1 (best)

Gene LINC00271, Length 397 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00271-205ENST00000579339 JPH4Q96JJ6 628 aa45.74■■■■■ 4.91
LINC00271-205ENST00000579339 PRG4Q92954 1404 aaPredicted RBP45.71■■■■■ 4.91
LINC00271-205ENST00000579339 KIAA0586Q9BVV6 1533 aa45.64■■■■■ 4.9
LINC00271-205ENST00000579339 TRHP20396 242 aaPredicted RBP45.49■■■■■ 4.87
LINC00271-205ENST00000579339 RAPGEF2Q9Y4G8 1499 aa45.49■■■■■ 4.87
LINC00271-205ENST00000579339 IQGAP2Q13576 1575 aa45.33■■■■■ 4.85
LINC00271-205ENST00000579339 PRXQ9BXM0 1461 aa45.23■■■■■ 4.83
LINC00271-205ENST00000579339 CARMIL2Q6F5E8 1435 aa45.16■■■■■ 4.82
LINC00271-205ENST00000579339 TTBK1Q5TCY1 1321 aaPredicted RBP45.15■■■■■ 4.82
LINC00271-205ENST00000579339 CSRNP3Q8WYN3 585 aa45.1■■■■■ 4.81
LINC00271-205ENST00000579339 PTPRGP23470 1445 aa45.09■■■■■ 4.81
LINC00271-205ENST00000579339 TNIKQ9UKE5 1360 aa45.07■■■■■ 4.81
LINC00271-205ENST00000579339 DISP1Q96F81 1524 aa45.07■■■■■ 4.81
LINC00271-205ENST00000579339 UGGT2Q9NYU1 1516 aa45.06■■■■■ 4.8
LINC00271-205ENST00000579339 ADCY10Q96PN6 1610 aa45.06■■■■■ 4.8
LINC00271-205ENST00000579339 CHIC1Q5VXU3 224 aa45.04■■■■■ 4.8
LINC00271-205ENST00000579339 CTTNBP2Q8WZ74 1663 aa45.03■■■■■ 4.8
LINC00271-205ENST00000579339 EEA1Q15075 1411 aa45■■■■■ 4.79
LINC00271-205ENST00000579339 FAM9AQ8IZU1 332 aaPredicted RBP44.99■■■■■ 4.79
LINC00271-205ENST00000579339 NPM1P06748 294 aaKnown RBP eCLIP44.95■■■■■ 4.79
LINC00271-205ENST00000579339 KIAA0556O60303 1618 aa44.93■■■■■ 4.78
LINC00271-205ENST00000579339 MAPKBP1O60336 1514 aa44.8■■■■■ 4.76
LINC00271-205ENST00000579339 UACAQ9BZF9 1416 aa44.77■■■■■ 4.76
LINC00271-205ENST00000579339 GOLGA3Q08378 1498 aa44.76■■■■■ 4.76
LINC00271-205ENST00000579339 ABCC2Q92887 1545 aa44.72■■■■■ 4.75
LINC00271-205ENST00000579339 KIF13AQ9H1H9 1805 aa44.72■■■■■ 4.75
LINC00271-205ENST00000579339 UHRF1BP1LA0JNW5 1464 aa44.71■■■■■ 4.75
LINC00271-205ENST00000579339 ABCC10Q5T3U5 1492 aa44.68■■■■■ 4.74
LINC00271-205ENST00000579339 FAM69CQ0P6D2 419 aa44.66■■■■■ 4.74
LINC00271-205ENST00000579339 DIP2BQ9P265 1576 aa44.61■■■■■ 4.73
LINC00271-205ENST00000579339 KIF21BO75037 1637 aa44.6■■■■■ 4.73
LINC00271-205ENST00000579339 P3H3Q8IVL6 736 aa44.58■■■■■ 4.73
LINC00271-205ENST00000579339 PLB1Q6P1J6 1458 aa44.58■■■■■ 4.73
LINC00271-205ENST00000579339 EHMT2Q96KQ7 1210 aa44.52■■■■■ 4.72
LINC00271-205ENST00000579339 ASXL2Q76L83 1435 aa44.51■■■■■ 4.72
LINC00271-205ENST00000579339 KDM5BQ9UGL1 1544 aa44.51■■■■■ 4.72
LINC00271-205ENST00000579339 RANGAP1P46060 587 aaPredicted RBP44.51■■■■■ 4.72
LINC00271-205ENST00000579339 SAMD9Q5K651 1589 aa44.47■■■■■ 4.71
LINC00271-205ENST00000579339 ABCA8O94911 1581 aa44.46■■■■■ 4.71
LINC00271-205ENST00000579339 ZCCHC11Q5TAX3 1644 aaKnown RBP44.45■■■■■ 4.71
LINC00271-205ENST00000579339 UBTFP17480 764 aaKnown RBP44.31■■■■■ 4.68
LINC00271-205ENST00000579339 FHOD3Q2V2M9 1422 aa44.28■■■■■ 4.68
LINC00271-205ENST00000579339 TSPOAP1O95153 1857 aa44.27■■■■■ 4.68
LINC00271-205ENST00000579339 ARID3CA6NKF2 412 aa44.25■■■■■ 4.67
LINC00271-205ENST00000579339 EPRSP07814 1512 aaKnown RBP44.24■■■■■ 4.67
LINC00271-205ENST00000579339 GLI2P10070 1586 aa44.23■■■■■ 4.67
LINC00271-205ENST00000579339 WDR7Q9Y4E6 1490 aa44.21■■■■■ 4.67
LINC00271-205ENST00000579339 EFCAB5A4FU69 1503 aa44.16■■■■■ 4.66
LINC00271-205ENST00000579339 RAPGEF6Q8TEU7 1601 aa44.13■■■■■ 4.66
LINC00271-205ENST00000579339 ATP10BO94823 1461 aa44.11■■■■■ 4.65
LINC00271-205ENST00000579339 PPRC1Q5VV67 1664 aaKnown RBP44.06■■■■■ 4.64
LINC00271-205ENST00000579339 KCNH8Q96L42 1107 aa44.05■■■■■ 4.64
LINC00271-205ENST00000579339 MAP3K4Q9Y6R4 1608 aa44.02■■■■■ 4.64
LINC00271-205ENST00000579339 KDM6BO15054 1643 aa44.01■■■■■ 4.64
LINC00271-205ENST00000579339 NUP153P49790 1475 aaKnown RBP44■■■■■ 4.63
LINC00271-205ENST00000579339 ARHGAP35Q9NRY4 1499 aa43.96■■■■■ 4.63
LINC00271-205ENST00000579339 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP43.94■■■■■ 4.62
LINC00271-205ENST00000579339 HNRNPUL2Q1KMD3 747 aaKnown RBP43.94■■■■■ 4.62
LINC00271-205ENST00000579339 TEX14Q8IWB6 1497 aa43.85■■■■■ 4.61
LINC00271-205ENST00000579339 CD109Q6YHK3 1445 aa43.85■■■■■ 4.61
LINC00271-205ENST00000579339 CFAP43Q8NDM7 1665 aa43.81■■■■■ 4.6
LINC00271-205ENST00000579339 FMN1Q68DA7 1419 aa43.77■■■■■ 4.6
LINC00271-205ENST00000579339 COL17A1Q9UMD9 1497 aaPredicted RBP43.75■■■■■ 4.59
LINC00271-205ENST00000579339 MAGI3Q5TCQ9 1506 aa43.74■■■■■ 4.59
LINC00271-205ENST00000579339 ATP1B4Q9UN42 357 aaPredicted RBP43.71■■■■■ 4.59
LINC00271-205ENST00000579339 CDK13Q14004 1512 aaKnown RBP43.7■■■■■ 4.59
LINC00271-205ENST00000579339 ABCA9Q8IUA7 1624 aa43.66■■■■■ 4.58
LINC00271-205ENST00000579339 PLEKHD1A6NEE1 506 aa43.66■■■■■ 4.58
LINC00271-205ENST00000579339 HECW1Q76N89 1606 aa43.62■■■■■ 4.57
LINC00271-205ENST00000579339 CLIP1P30622 1438 aa43.56■■■■■ 4.56
LINC00271-205ENST00000579339 AEBP2Q6ZN18 517 aaPredicted RBP43.47■■■■■ 4.55
LINC00271-205ENST00000579339 PCF11O94913 1555 aaKnown RBP43.46■■■■■ 4.55
LINC00271-205ENST00000579339 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP43.43■■■■■ 4.54
LINC00271-205ENST00000579339 CASKIN1Q8WXD9 1431 aa43.4■■■■■ 4.54
LINC00271-205ENST00000579339 LRRIQ1Q96JM4 1722 aa43.4■■■■■ 4.54
LINC00271-205ENST00000579339 TTC37Q6PGP7 1564 aa43.4■■■■■ 4.54
LINC00271-205ENST00000579339 ARAP3Q8WWN8 1544 aa43.37■■■■■ 4.53
LINC00271-205ENST00000579339 CDK11AQ9UQ88 783 aaPredicted RBP43.35■■■■■ 4.53
LINC00271-205ENST00000579339 NEO1Q92859 1461 aa43.34■■■■■ 4.53
LINC00271-205ENST00000579339 PHLDB1Q86UU1 1377 aa43.32■■■■■ 4.53
LINC00271-205ENST00000579339 TROQ12816 1431 aaPredicted RBP43.28■■■■■ 4.52
LINC00271-205ENST00000579339 CEP162Q5TB80 1403 aa43.28■■■■■ 4.52
LINC00271-205ENST00000579339 FYCO1Q9BQS8 1478 aa43.27■■■■■ 4.52
LINC00271-205ENST00000579339 LOC105371045A0A1W2PR82 267 aa43.27■■■■■ 4.52
LINC00271-205ENST00000579339 KDM4FA0A1W2PPD8 638 aa43.25■■■■■ 4.51
LINC00271-205ENST00000579339 CCDC18Q5T9S5 1454 aa43.25■■■■■ 4.51
LINC00271-205ENST00000579339 KIF14Q15058 1648 aa43.24■■■■■ 4.51
LINC00271-205ENST00000579339 RAPGEF3O95398 923 aa43.24■■■■■ 4.51
LINC00271-205ENST00000579339 FANCAO15360 1455 aa43.24■■■■■ 4.51
LINC00271-205ENST00000579339 AKNAQ7Z591 1439 aa43.19■■■■■ 4.5
LINC00271-205ENST00000579339 PLCH2O75038 1416 aa43.15■■■■■ 4.5
LINC00271-205ENST00000579339 CFAP74Q9C0B2 1584 aa43.14■■■■■ 4.5
LINC00271-205ENST00000579339 FRMPD1Q5SYB0 1578 aa43.12■■■■■ 4.49
LINC00271-205ENST00000579339 ADGRL1O94910 1474 aa43.1■■■■■ 4.49
LINC00271-205ENST00000579339 DENND4BO75064 1496 aaPredicted RBP43.08■■■■■ 4.49
LINC00271-205ENST00000579339 MYO5CQ9NQX4 1742 aa43.08■■■■■ 4.49
LINC00271-205ENST00000579339 RICTORQ6R327 1708 aa43■■■■■ 4.47
LINC00271-205ENST00000579339 EFCAB2Q5VUJ9 269 aa42.99■■■■■ 4.47
LINC00271-205ENST00000579339 ARHGAP5Q13017 1502 aa42.97■■■■■ 4.47
LINC00271-205ENST00000579339 SCAPERQ9BY12 1400 aa42.96■■■■■ 4.47
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms