RNA–Protein interactions for RNA: ENST00000579289.1

SUPT4H1-203, Transcript of SPT4 homolog, DSIF elongation factor subunit, humanhuman

TSL 3

Gene SUPT4H1, Length 318 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT4H1-203ENST00000579289 BIVM-ERCC5R4GMW8 1640 aa20.71■□□□□ 0.91
SUPT4H1-203ENST00000579289 JPH4Q96JJ6 628 aa20.69■□□□□ 0.9
SUPT4H1-203ENST00000579289 TOP2BQ02880 1626 aa20.68■□□□□ 0.9
SUPT4H1-203ENST00000579289 FAM69CQ0P6D2 419 aa20.68■□□□□ 0.9
SUPT4H1-203ENST00000579289 ADCY10Q96PN6 1610 aa20.65■□□□□ 0.9
SUPT4H1-203ENST00000579289 ILDR1Q86SU0 546 aaPredicted RBP20.64■□□□□ 0.89
SUPT4H1-203ENST00000579289 RUSC2Q8N2Y8 1516 aa20.63■□□□□ 0.89
SUPT4H1-203ENST00000579289 KDM6BO15054 1643 aa20.56■□□□□ 0.88
SUPT4H1-203ENST00000579289 TSPOAP1O95153 1857 aa20.47■□□□□ 0.87
SUPT4H1-203ENST00000579289 PPRC1Q5VV67 1664 aaKnown RBP20.46■□□□□ 0.87
SUPT4H1-203ENST00000579289 NPM1P06748 294 aaKnown RBP eCLIP20.46■□□□□ 0.87
SUPT4H1-203ENST00000579289 KIAA0586Q9BVV6 1533 aa20.45■□□□□ 0.86
SUPT4H1-203ENST00000579289 COL17A1Q9UMD9 1497 aaPredicted RBP20.41■□□□□ 0.86
SUPT4H1-203ENST00000579289 IGF1RP08069 1367 aa20.39■□□□□ 0.85
SUPT4H1-203ENST00000579289 GLI2P10070 1586 aa20.38■□□□□ 0.85
SUPT4H1-203ENST00000579289 ADGRL1O94910 1474 aa20.37■□□□□ 0.85
SUPT4H1-203ENST00000579289 ABCC2Q92887 1545 aa20.33■□□□□ 0.85
SUPT4H1-203ENST00000579289 PTPRGP23470 1445 aa20.31■□□□□ 0.84
SUPT4H1-203ENST00000579289 ASXL2Q76L83 1435 aa20.31■□□□□ 0.84
SUPT4H1-203ENST00000579289 SUPT5HO00267 1087 aaKnown RBP20.3■□□□□ 0.84
SUPT4H1-203ENST00000579289 HECW2Q9P2P5 1572 aa20.28■□□□□ 0.84
SUPT4H1-203ENST00000579289 UHRF1BP1LA0JNW5 1464 aa20.27■□□□□ 0.84
SUPT4H1-203ENST00000579289 PLB1Q6P1J6 1458 aa20.26■□□□□ 0.83
SUPT4H1-203ENST00000579289 TNIKQ9UKE5 1360 aa20.24■□□□□ 0.83
SUPT4H1-203ENST00000579289 CUL7Q14999 1698 aa20.24■□□□□ 0.83
SUPT4H1-203ENST00000579289 MAP3K4Q9Y6R4 1608 aa20.24■□□□□ 0.83
SUPT4H1-203ENST00000579289 EPRSP07814 1512 aaKnown RBP20.22■□□□□ 0.83
SUPT4H1-203ENST00000579289 DISP1Q96F81 1524 aa20.2■□□□□ 0.82
SUPT4H1-203ENST00000579289 KDM5BQ9UGL1 1544 aa20.2■□□□□ 0.82
SUPT4H1-203ENST00000579289 KIF27Q86VH2 1401 aa20.18■□□□□ 0.82
SUPT4H1-203ENST00000579289 UACAQ9BZF9 1416 aa20.17■□□□□ 0.82
SUPT4H1-203ENST00000579289 CARMIL1Q5VZK9 1371 aa20.15■□□□□ 0.82
SUPT4H1-203ENST00000579289 CARMIL2Q6F5E8 1435 aa20.13■□□□□ 0.81
SUPT4H1-203ENST00000579289 IQGAP2Q13576 1575 aa20.12■□□□□ 0.81
SUPT4H1-203ENST00000579289 TTBK1Q5TCY1 1321 aaPredicted RBP20.11■□□□□ 0.81
SUPT4H1-203ENST00000579289 ZCCHC11Q5TAX3 1644 aaKnown RBP20.09■□□□□ 0.81
SUPT4H1-203ENST00000579289 TEX14Q8IWB6 1497 aa20.07■□□□□ 0.8
SUPT4H1-203ENST00000579289 UGGT2Q9NYU1 1516 aa20.05■□□□□ 0.8
SUPT4H1-203ENST00000579289 WDR7Q9Y4E6 1490 aa20■□□□□ 0.79
SUPT4H1-203ENST00000579289 MAGI3Q5TCQ9 1506 aa20■□□□□ 0.79
SUPT4H1-203ENST00000579289 KIAA0556O60303 1618 aa19.98■□□□□ 0.79
SUPT4H1-203ENST00000579289 FBXO41Q8TF61 875 aa19.98■□□□□ 0.79
SUPT4H1-203ENST00000579289 CD109Q6YHK3 1445 aa19.93■□□□□ 0.78
SUPT4H1-203ENST00000579289 CFAP43Q8NDM7 1665 aa19.92■□□□□ 0.78
SUPT4H1-203ENST00000579289 KIF21BO75037 1637 aa19.91■□□□□ 0.78
SUPT4H1-203ENST00000579289 ABCA8O94911 1581 aa19.89■□□□□ 0.77
SUPT4H1-203ENST00000579289 RAPGEF2Q9Y4G8 1499 aa19.88■□□□□ 0.77
SUPT4H1-203ENST00000579289 ADAMTSL3P82987 1691 aa19.87■□□□□ 0.77
SUPT4H1-203ENST00000579289 ARAP3Q8WWN8 1544 aa19.87■□□□□ 0.77
SUPT4H1-203ENST00000579289 PTPRMP28827 1452 aa19.84■□□□□ 0.77
SUPT4H1-203ENST00000579289 KCNH8Q96L42 1107 aa19.8■□□□□ 0.76
SUPT4H1-203ENST00000579289 LMTK3Q96Q04 1460 aa19.77■□□□□ 0.76
SUPT4H1-203ENST00000579289 FRMPD1Q5SYB0 1578 aa19.73■□□□□ 0.75
SUPT4H1-203ENST00000579289 ATP10BO94823 1461 aa19.73■□□□□ 0.75
SUPT4H1-203ENST00000579289 CTTNBP2Q8WZ74 1663 aa19.72■□□□□ 0.75
SUPT4H1-203ENST00000579289 PCF11O94913 1555 aaKnown RBP19.72■□□□□ 0.75
SUPT4H1-203ENST00000579289 BCORL1Q5H9F3 1711 aa19.72■□□□□ 0.75
SUPT4H1-203ENST00000579289 ABCA9Q8IUA7 1624 aa19.71■□□□□ 0.75
SUPT4H1-203ENST00000579289 MADDQ8WXG6 1647 aa19.69■□□□□ 0.74
SUPT4H1-203ENST00000579289 GOLGA3Q08378 1498 aa19.69■□□□□ 0.74
SUPT4H1-203ENST00000579289 RAPGEF3O95398 923 aa19.69■□□□□ 0.74
SUPT4H1-203ENST00000579289 PHLDB1Q86UU1 1377 aa19.68■□□□□ 0.74
SUPT4H1-203ENST00000579289 PRXQ9BXM0 1461 aa19.64■□□□□ 0.73
SUPT4H1-203ENST00000579289 NEO1Q92859 1461 aa19.63■□□□□ 0.73
SUPT4H1-203ENST00000579289 SIGLEC1Q9BZZ2 1709 aa19.61■□□□□ 0.73
SUPT4H1-203ENST00000579289 ARID3CA6NKF2 412 aa19.57■□□□□ 0.72
SUPT4H1-203ENST00000579289 HSPA2P54652 639 aa19.56■□□□□ 0.72
SUPT4H1-203ENST00000579289 ARHGEF40Q8TER5 1519 aa19.56■□□□□ 0.72
SUPT4H1-203ENST00000579289 RIMS1Q86UR5 1692 aaKnown RBP19.55■□□□□ 0.72
SUPT4H1-203ENST00000579289 RICTORQ6R327 1708 aa19.54■□□□□ 0.72
SUPT4H1-203ENST00000579289 ILDR2Q71H61 639 aa19.53■□□□□ 0.72
SUPT4H1-203ENST00000579289 CERKQ8TCT0 537 aa19.52■□□□□ 0.72
SUPT4H1-203ENST00000579289 SAMD9Q5K651 1589 aa19.52■□□□□ 0.71
SUPT4H1-203ENST00000579289 FHOD3Q2V2M9 1422 aa19.51■□□□□ 0.71
SUPT4H1-203ENST00000579289 P3H3Q8IVL6 736 aa19.5■□□□□ 0.71
SUPT4H1-203ENST00000579289 NUP153P49790 1475 aaKnown RBP19.49■□□□□ 0.71
SUPT4H1-203ENST00000579289 RAPGEF6Q8TEU7 1601 aa19.47■□□□□ 0.71
SUPT4H1-203ENST00000579289 ARID4BQ4LE39 1312 aaPredicted RBP19.47■□□□□ 0.71
SUPT4H1-203ENST00000579289 ZMYM4Q5VZL5 1548 aa19.46■□□□□ 0.71
SUPT4H1-203ENST00000579289 DENND4BO75064 1496 aaPredicted RBP19.46■□□□□ 0.71
SUPT4H1-203ENST00000579289 YEATS2Q9ULM3 1422 aa19.45■□□□□ 0.7
SUPT4H1-203ENST00000579289 AKNAQ7Z591 1439 aa19.44■□□□□ 0.7
SUPT4H1-203ENST00000579289 TTC37Q6PGP7 1564 aa19.41■□□□□ 0.7
SUPT4H1-203ENST00000579289 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.41■□□□□ 0.75e-20■■■□□ 14.8
SUPT4H1-203ENST00000579289 SOCS7O14512 581 aa19.4■□□□□ 0.7
SUPT4H1-203ENST00000579289 FANCAO15360 1455 aa19.38■□□□□ 0.69
SUPT4H1-203ENST00000579289 STRCQ7RTU9 1775 aa19.38■□□□□ 0.69
SUPT4H1-203ENST00000579289 ARHGEF12Q9NZN5 1544 aa19.37■□□□□ 0.69
SUPT4H1-203ENST00000579289 HECW1Q76N89 1606 aa19.36■□□□□ 0.69
SUPT4H1-203ENST00000579289 ZFYVE16Q7Z3T8 1539 aa19.36■□□□□ 0.69
SUPT4H1-203ENST00000579289 MAGI2Q86UL8 1455 aa19.36■□□□□ 0.69
SUPT4H1-203ENST00000579289 FER1L4A9Z1Z3 1794 aa19.34■□□□□ 0.69
SUPT4H1-203ENST00000579289 POGZQ7Z3K3 1410 aa19.34■□□□□ 0.69
SUPT4H1-203ENST00000579289 EFCAB5A4FU69 1503 aa19.33■□□□□ 0.68
SUPT4H1-203ENST00000579289 DISP3Q9P2K9 1392 aa19.32■□□□□ 0.68
SUPT4H1-203ENST00000579289 CFAP74Q9C0B2 1584 aa19.31■□□□□ 0.68
SUPT4H1-203ENST00000579289 PLPPR3Q6T4P5 718 aa19.3■□□□□ 0.68
SUPT4H1-203ENST00000579289 PREX1Q8TCU6 1659 aa19.3■□□□□ 0.68
SUPT4H1-203ENST00000579289 PLEKHD1A6NEE1 506 aa19.27■□□□□ 0.68
SUPT4H1-203ENST00000579289 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.27■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms