RNA–Protein interactions for RNA: ENST00000579200.1

ZNF407-204, Transcript of zinc finger protein 407, humanhuman

Gene ZNF407, Length 4,390 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF407-204ENST00000579200 CNGB1Q14028 1251 aaPredicted RBP17.35■□□□□ 0.37
ZNF407-204ENST00000579200 MTUS2Q5JR59 1369 aa17.34■□□□□ 0.37
ZNF407-204ENST00000579200 UNC13AQ9UPW8 1703 aa17.32■□□□□ 0.36
ZNF407-204ENST00000579200 RUSC2Q8N2Y8 1516 aa17.29■□□□□ 0.36
ZNF407-204ENST00000579200 ZNF326Q5BKZ1 582 aaKnown RBP17.28■□□□□ 0.36
ZNF407-204ENST00000579200 RAD54L2Q9Y4B4 1467 aa17.27■□□□□ 0.36
ZNF407-204ENST00000579200 PLEKHD1A6NEE1 506 aa17.27■□□□□ 0.36
ZNF407-204ENST00000579200 EIF5BO60841 1220 aaKnown RBP17.26■□□□□ 0.35
ZNF407-204ENST00000579200 TNIKQ9UKE5 1360 aa17.25■□□□□ 0.35
ZNF407-204ENST00000579200 ANP32CO43423 234 aa17.21■□□□□ 0.35
ZNF407-204ENST00000579200 FGD5Q6ZNL6 1462 aa17.21■□□□□ 0.35
ZNF407-204ENST00000579200 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.2■□□□□ 0.34
ZNF407-204ENST00000579200 NBR1Q14596 966 aa17.18■□□□□ 0.34
ZNF407-204ENST00000579200 CFTRP13569 1480 aa17.18■□□□□ 0.34
ZNF407-204ENST00000579200 AQRO60306 1485 aaKnown RBP eCLIP17.18■□□□□ 0.34
ZNF407-204ENST00000579200 TRHP20396 242 aaPredicted RBP17.17■□□□□ 0.34
ZNF407-204ENST00000579200 HMGXB3Q12766 1538 aa17.16■□□□□ 0.34
ZNF407-204ENST00000579200 TSPY4P0CV99 314 aa17.14■□□□□ 0.33
ZNF407-204ENST00000579200 TSPY10P0CW01 314 aa17.14■□□□□ 0.33
ZNF407-204ENST00000579200 JPH4Q96JJ6 628 aa17.14■□□□□ 0.33
ZNF407-204ENST00000579200 SUPT16HQ9Y5B9 1047 aaKnown RBP17.13■□□□□ 0.33
ZNF407-204ENST00000579200 RRP7BPQ9NSQ0 103 aa17.13■□□□□ 0.33
ZNF407-204ENST00000579200 ESF1Q9H501 851 aaKnown RBP17.12■□□□□ 0.33
ZNF407-204ENST00000579200 SLC4A1APQ9BWU0 796 aaKnown RBP17.12■□□□□ 0.33
ZNF407-204ENST00000579200 RAPGEF2Q9Y4G8 1499 aa17.11■□□□□ 0.33
ZNF407-204ENST00000579200 CHGAP10645 457 aaKnown RBP17.1■□□□□ 0.33
ZNF407-204ENST00000579200 CFDP1Q9UEE9 299 aaPredicted RBP17.1■□□□□ 0.33
ZNF407-204ENST00000579200 ANP32AP39687 249 aaKnown RBP17.09■□□□□ 0.33
ZNF407-204ENST00000579200 CYB5RLQ6IPT4 315 aa17.08■□□□□ 0.32
ZNF407-204ENST00000579200 SENP3Q9H4L4 574 aaPredicted RBP17.07■□□□□ 0.32
ZNF407-204ENST00000579200 GAPVD1Q14C86 1478 aa17.06■□□□□ 0.32
ZNF407-204ENST00000579200 IGF1RP08069 1367 aa17.05■□□□□ 0.32
ZNF407-204ENST00000579200 OSCARQ8IYS5 282 aa17.05■□□□□ 0.32
ZNF407-204ENST00000579200 DDX10Q13206 875 aaKnown RBP17.05■□□□□ 0.32
ZNF407-204ENST00000579200 NPM2Q86SE8 214 aaKnown RBP17.03■□□□□ 0.32
ZNF407-204ENST00000579200 FHOD3Q2V2M9 1422 aa17.03■□□□□ 0.32
ZNF407-204ENST00000579200 KANK4Q5T7N3 995 aaPredicted RBP17.02■□□□□ 0.32
ZNF407-204ENST00000579200 CARMIL2Q6F5E8 1435 aa17.02■□□□□ 0.31
ZNF407-204ENST00000579200 IRX6P78412 446 aaPredicted RBP17.01■□□□□ 0.31
ZNF407-204ENST00000579200 MRC2Q9UBG0 1479 aa16.99■□□□□ 0.31
ZNF407-204ENST00000579200 HNRNPUQ00839 825 aaKnown RBP eCLIP16.98■□□□□ 0.31
ZNF407-204ENST00000579200 TOPBP1Q92547 1522 aa16.98■□□□□ 0.31
ZNF407-204ENST00000579200 STAG3Q9UJ98 1225 aa16.97■□□□□ 0.31
ZNF407-204ENST00000579200 SYNJ1O43426 1573 aa16.97■□□□□ 0.31
ZNF407-204ENST00000579200 ARID4BQ4LE39 1312 aaPredicted RBP16.96■□□□□ 0.31
ZNF407-204ENST00000579200 TSHZ2Q9NRE2 1034 aa16.96■□□□□ 0.31
ZNF407-204ENST00000579200 FHAD1B1AJZ9 1412 aa16.95■□□□□ 0.3
ZNF407-204ENST00000579200 POLA1P09884 1462 aaPredicted RBP16.94■□□□□ 0.3
ZNF407-204ENST00000579200 CUX1P39880 1505 aa16.94■□□□□ 0.3
ZNF407-204ENST00000579200 CCNB3Q8WWL7 1395 aa16.9■□□□□ 0.3
ZNF407-204ENST00000579200 RTN4Q9NQC3 1192 aaKnown RBP16.9■□□□□ 0.3
ZNF407-204ENST00000579200 ZBTB47Q9UFB7 747 aaPredicted RBP16.9■□□□□ 0.3
ZNF407-204ENST00000579200 VPS8Q8N3P4 1428 aa16.89■□□□□ 0.29
ZNF407-204ENST00000579200 RBM19Q9Y4C8 960 aaKnown RBP16.89■□□□□ 0.29
ZNF407-204ENST00000579200 MLECQ14165 292 aa16.88■□□□□ 0.29
ZNF407-204ENST00000579200 HIRIP3Q9BW71 556 aaPredicted RBP16.88■□□□□ 0.29
ZNF407-204ENST00000579200 KDM2AQ9Y2K7 1162 aa16.87■□□□□ 0.29
ZNF407-204ENST00000579200 PEG3Q9GZU2 1588 aa16.85■□□□□ 0.29
ZNF407-204ENST00000579200 PTPRGP23470 1445 aa16.85■□□□□ 0.29
ZNF407-204ENST00000579200 GRIN2BQ13224 1484 aa16.84■□□□□ 0.29
ZNF407-204ENST00000579200 LAMC3Q9Y6N6 1575 aa16.84■□□□□ 0.29
ZNF407-204ENST00000579200 FMN1Q68DA7 1419 aa16.83■□□□□ 0.28
ZNF407-204ENST00000579200 DEKP35659 375 aaKnown RBP16.82■□□□□ 0.28
ZNF407-204ENST00000579200 IFT140Q96RY7 1462 aa16.81■□□□□ 0.28
ZNF407-204ENST00000579200 RGL3Q3MIN7 710 aa16.8■□□□□ 0.28
ZNF407-204ENST00000579200 TONSLQ96HA7 1378 aa16.79■□□□□ 0.28
ZNF407-204ENST00000579200 GLIPR1L2Q4G1C9 344 aa16.78■□□□□ 0.28
ZNF407-204ENST00000579200 URB2Q14146 1524 aaKnown RBP16.78■□□□□ 0.28
ZNF407-204ENST00000579200 FAM9BQ8IZU0 186 aa16.77■□□□□ 0.28
ZNF407-204ENST00000579200 SNAPC4Q5SXM2 1469 aa16.77■□□□□ 0.27
ZNF407-204ENST00000579200 DNMBPQ6XZF7 1577 aa16.77■□□□□ 0.27
ZNF407-204ENST00000579200 CCDC136Q96JN2 1154 aa16.76■□□□□ 0.27
ZNF407-204ENST00000579200 TOP2BQ02880 1626 aa16.75■□□□□ 0.27
ZNF407-204ENST00000579200 HNRNPMP52272 730 aaKnown RBP eCLIP16.75■□□□□ 0.27
ZNF407-204ENST00000579200 ZNF608Q9ULD9 1512 aaPredicted RBP16.74■□□□□ 0.27
ZNF407-204ENST00000579200 GGT6Q6P531 493 aa16.74■□□□□ 0.27
ZNF407-204ENST00000579200 EFCAB2Q5VUJ9 269 aa16.73■□□□□ 0.27
ZNF407-204ENST00000579200 PRG4Q92954 1404 aaPredicted RBP16.68■□□□□ 0.26
ZNF407-204ENST00000579200 ARHGAP35Q9NRY4 1499 aa16.67■□□□□ 0.26
ZNF407-204ENST00000579200 SIN3AQ96ST3 1273 aa16.67■□□□□ 0.26
ZNF407-204ENST00000579200 FOXD1Q16676 465 aa16.66■□□□□ 0.26
ZNF407-204ENST00000579200 NOP58Q9Y2X3 529 aaKnown RBP16.66■□□□□ 0.26
ZNF407-204ENST00000579200 FAM69CQ0P6D2 419 aa16.65■□□□□ 0.26
ZNF407-204ENST00000579200 PPP1R15AO75807 674 aaPredicted RBP16.64■□□□□ 0.25
ZNF407-204ENST00000579200 ARXQ96QS3 562 aa16.63■□□□□ 0.25
ZNF407-204ENST00000579200 ABCA10Q8WWZ4 1543 aa16.62■□□□□ 0.25
ZNF407-204ENST00000579200 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.61■□□□□ 0.25
ZNF407-204ENST00000579200 PRXQ9BXM0 1461 aa16.6■□□□□ 0.25
ZNF407-204ENST00000579200 PLEKHG5O94827 1062 aa16.59■□□□□ 0.25
ZNF407-204ENST00000579200 NEFMP07197 916 aa16.59■□□□□ 0.25
ZNF407-204ENST00000579200 ZNF644Q9H582 1327 aaPredicted RBP16.58■□□□□ 0.25
ZNF407-204ENST00000579200 KIF3BO15066 747 aa16.58■□□□□ 0.25
ZNF407-204ENST00000579200 LAS1LQ9Y4W2 734 aaKnown RBP16.58■□□□□ 0.25
ZNF407-204ENST00000579200 MRS2Q9HD23 443 aa16.57■□□□□ 0.24
ZNF407-204ENST00000579200 B4GALNT3Q6L9W6 998 aa16.56■□□□□ 0.24
ZNF407-204ENST00000579200 SALL2Q9Y467 1007 aaPredicted RBP16.56■□□□□ 0.24
ZNF407-204ENST00000579200 SPAG9O60271 1321 aaKnown RBP16.55■□□□□ 0.24
ZNF407-204ENST00000579200 CCDC18Q5T9S5 1454 aa16.55■□□□□ 0.24
ZNF407-204ENST00000579200 ARAP1Q96P48 1450 aa16.55■□□□□ 0.24
ZNF407-204ENST00000579200 PPP4R2Q9NY27 417 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms