RNA–Protein interactions for RNA: ENST00000579057.5

LINC00271-204, long intergenic non-protein coding RNA 271, humanhuman

TSL 2

Gene LINC00271, Length 464 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00271-204ENST00000579057 SHROOM2Q13796 1616 aa16.57■□□□□ 0.24
LINC00271-204ENST00000579057 FHAD1B1AJZ9 1412 aa16.57■□□□□ 0.24
LINC00271-204ENST00000579057 MSH5O43196 834 aa16.54■□□□□ 0.24
LINC00271-204ENST00000579057 RUSC2Q8N2Y8 1516 aa16.44■□□□□ 0.22
LINC00271-204ENST00000579057 PRG4Q92954 1404 aaPredicted RBP16.42■□□□□ 0.22
LINC00271-204ENST00000579057 JPH4Q96JJ6 628 aa16.39■□□□□ 0.21
LINC00271-204ENST00000579057 KIF13AQ9H1H9 1805 aa16.38■□□□□ 0.21
LINC00271-204ENST00000579057 IGF1RP08069 1367 aa16.37■□□□□ 0.21
LINC00271-204ENST00000579057 CUL7Q14999 1698 aa16.32■□□□□ 0.2
LINC00271-204ENST00000579057 KIF27Q86VH2 1401 aa16.31■□□□□ 0.2
LINC00271-204ENST00000579057 KIAA0586Q9BVV6 1533 aa16.3■□□□□ 0.2
LINC00271-204ENST00000579057 ADCY10Q96PN6 1610 aa16.29■□□□□ 0.2
LINC00271-204ENST00000579057 MAPKBP1O60336 1514 aa16.25■□□□□ 0.19
LINC00271-204ENST00000579057 ABCC10Q5T3U5 1492 aa16.23■□□□□ 0.19
LINC00271-204ENST00000579057 DIP2BQ9P265 1576 aa16.22■□□□□ 0.19
LINC00271-204ENST00000579057 CARMIL1Q5VZK9 1371 aa16.21■□□□□ 0.19
LINC00271-204ENST00000579057 FAM69CQ0P6D2 419 aa16.17■□□□□ 0.18
LINC00271-204ENST00000579057 IQGAP2Q13576 1575 aa16.14■□□□□ 0.17
LINC00271-204ENST00000579057 NPM1P06748 294 aaKnown RBP eCLIP16.14■□□□□ 0.17
LINC00271-204ENST00000579057 PTPRGP23470 1445 aa16.13■□□□□ 0.17
LINC00271-204ENST00000579057 DISP1Q96F81 1524 aa16.11■□□□□ 0.17
LINC00271-204ENST00000579057 TNIKQ9UKE5 1360 aa16.11■□□□□ 0.17
LINC00271-204ENST00000579057 TSPOAP1O95153 1857 aa16.1■□□□□ 0.17
LINC00271-204ENST00000579057 ABCC2Q92887 1545 aa16.09■□□□□ 0.17
LINC00271-204ENST00000579057 CARMIL2Q6F5E8 1435 aa16.09■□□□□ 0.17
LINC00271-204ENST00000579057 PIAS4Q8N2W9 510 aaPredicted RBP16.08■□□□□ 0.16
LINC00271-204ENST00000579057 RAPGEF2Q9Y4G8 1499 aa16.07■□□□□ 0.16
LINC00271-204ENST00000579057 UGGT2Q9NYU1 1516 aa16.06■□□□□ 0.16
LINC00271-204ENST00000579057 UHRF1BP1LA0JNW5 1464 aa16.06■□□□□ 0.16
LINC00271-204ENST00000579057 KDM6BO15054 1643 aa16.05■□□□□ 0.16
LINC00271-204ENST00000579057 PPRC1Q5VV67 1664 aaKnown RBP16.05■□□□□ 0.16
LINC00271-204ENST00000579057 TTBK1Q5TCY1 1321 aaPredicted RBP16.04■□□□□ 0.16
LINC00271-204ENST00000579057 ASXL2Q76L83 1435 aa16.03■□□□□ 0.16
LINC00271-204ENST00000579057 UACAQ9BZF9 1416 aa16.02■□□□□ 0.16
LINC00271-204ENST00000579057 KIAA0556O60303 1618 aa16.02■□□□□ 0.16
LINC00271-204ENST00000579057 GLI2P10070 1586 aa16.02■□□□□ 0.16
LINC00271-204ENST00000579057 PLB1Q6P1J6 1458 aa16.01■□□□□ 0.15
LINC00271-204ENST00000579057 KDM5BQ9UGL1 1544 aa16■□□□□ 0.15
LINC00271-204ENST00000579057 CTTNBP2Q8WZ74 1663 aa15.98■□□□□ 0.15
LINC00271-204ENST00000579057 ZCCHC11Q5TAX3 1644 aaKnown RBP15.97■□□□□ 0.15
LINC00271-204ENST00000579057 EPRSP07814 1512 aaKnown RBP15.95■□□□□ 0.14
LINC00271-204ENST00000579057 MAP3K4Q9Y6R4 1608 aa15.94■□□□□ 0.14
LINC00271-204ENST00000579057 PRXQ9BXM0 1461 aa15.94■□□□□ 0.14
LINC00271-204ENST00000579057 KDM4FA0A1W2PPD8 638 aa15.93■□□□□ 0.14
LINC00271-204ENST00000579057 COL17A1Q9UMD9 1497 aaPredicted RBP15.92■□□□□ 0.14
LINC00271-204ENST00000579057 ABCA8O94911 1581 aa15.89■□□□□ 0.13
LINC00271-204ENST00000579057 GOLGA3Q08378 1498 aa15.86■□□□□ 0.13
LINC00271-204ENST00000579057 WDR7Q9Y4E6 1490 aa15.86■□□□□ 0.13
LINC00271-204ENST00000579057 TEX14Q8IWB6 1497 aa15.82■□□□□ 0.12
LINC00271-204ENST00000579057 PLPPR3Q6T4P5 718 aa15.81■□□□□ 0.12
LINC00271-204ENST00000579057 CFAP43Q8NDM7 1665 aa15.79■□□□□ 0.12
LINC00271-204ENST00000579057 ADGRL1O94910 1474 aa15.78■□□□□ 0.12
LINC00271-204ENST00000579057 MAGI3Q5TCQ9 1506 aa15.78■□□□□ 0.12
LINC00271-204ENST00000579057 SAMD9Q5K651 1589 aa15.77■□□□□ 0.11
LINC00271-204ENST00000579057 CD109Q6YHK3 1445 aa15.76■□□□□ 0.11
LINC00271-204ENST00000579057 ATP10BO94823 1461 aa15.74■□□□□ 0.11
LINC00271-204ENST00000579057 CSRNP3Q8WYN3 585 aa15.73■□□□□ 0.11
LINC00271-204ENST00000579057 KCNH8Q96L42 1107 aa15.73■□□□□ 0.11
LINC00271-204ENST00000579057 P3H3Q8IVL6 736 aa15.71■□□□□ 0.11
LINC00271-204ENST00000579057 ABCA9Q8IUA7 1624 aa15.68■□□□□ 0.1
LINC00271-204ENST00000579057 RAPGEF6Q8TEU7 1601 aa15.68■□□□□ 0.1
LINC00271-204ENST00000579057 ARID3CA6NKF2 412 aa15.68■□□□□ 0.1
LINC00271-204ENST00000579057 ARAP3Q8WWN8 1544 aa15.67■□□□□ 0.1
LINC00271-204ENST00000579057 EEA1Q15075 1411 aa15.65■□□□□ 0.1
LINC00271-204ENST00000579057 NUP153P49790 1475 aaKnown RBP15.65■□□□□ 0.1
LINC00271-204ENST00000579057 KIF21BO75037 1637 aa15.63■□□□□ 0.09
LINC00271-204ENST00000579057 PPP6R1Q9UPN7 881 aa15.62■□□□□ 0.09
LINC00271-204ENST00000579057 FHOD3Q2V2M9 1422 aa15.61■□□□□ 0.09
LINC00271-204ENST00000579057 HECW2Q9P2P5 1572 aa15.6■□□□□ 0.09
LINC00271-204ENST00000579057 ADRA2BP18089 450 aa15.59■□□□□ 0.09
LINC00271-204ENST00000579057 FRMPD1Q5SYB0 1578 aa15.58■□□□□ 0.09
LINC00271-204ENST00000579057 PHLDB1Q86UU1 1377 aa15.57■□□□□ 0.08
LINC00271-204ENST00000579057 NEO1Q92859 1461 aa15.57■□□□□ 0.08
LINC00271-204ENST00000579057 EFCAB5A4FU69 1503 aa15.55■□□□□ 0.08
LINC00271-204ENST00000579057 RANGAP1P46060 587 aaPredicted RBP15.55■□□□□ 0.08
LINC00271-204ENST00000579057 FAM9AQ8IZU1 332 aaPredicted RBP15.55■□□□□ 0.08
LINC00271-204ENST00000579057 RAPGEF3O95398 923 aa15.54■□□□□ 0.08
LINC00271-204ENST00000579057 ADAMTSL3P82987 1691 aa15.53■□□□□ 0.08
LINC00271-204ENST00000579057 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.51■□□□□ 0.07
LINC00271-204ENST00000579057 TTC37Q6PGP7 1564 aa15.5■□□□□ 0.07
LINC00271-204ENST00000579057 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.5■□□□□ 0.07
LINC00271-204ENST00000579057 HNRNPUL2Q1KMD3 747 aaKnown RBP15.5■□□□□ 0.07
LINC00271-204ENST00000579057 RICTORQ6R327 1708 aa15.5■□□□□ 0.07
LINC00271-204ENST00000579057 BCORL1Q5H9F3 1711 aa15.48■□□□□ 0.07
LINC00271-204ENST00000579057 CDK13Q14004 1512 aaKnown RBP15.48■□□□□ 0.07
LINC00271-204ENST00000579057 ILDR1Q86SU0 546 aaPredicted RBP15.47■□□□□ 0.07
LINC00271-204ENST00000579057 ARHGEF40Q8TER5 1519 aa15.47■□□□□ 0.07
LINC00271-204ENST00000579057 PLEKHD1A6NEE1 506 aa15.46■□□□□ 0.07
LINC00271-204ENST00000579057 PTPRMP28827 1452 aa15.46■□□□□ 0.06
LINC00271-204ENST00000579057 AKNAQ7Z591 1439 aa15.45■□□□□ 0.06
LINC00271-204ENST00000579057 FANCAO15360 1455 aa15.45■□□□□ 0.06
LINC00271-204ENST00000579057 SIGLEC1Q9BZZ2 1709 aa15.44■□□□□ 0.06
LINC00271-204ENST00000579057 DENND4BO75064 1496 aaPredicted RBP15.44■□□□□ 0.06
LINC00271-204ENST00000579057 ARHGAP35Q9NRY4 1499 aa15.44■□□□□ 0.06
LINC00271-204ENST00000579057 CFAP74Q9C0B2 1584 aa15.44■□□□□ 0.06
LINC00271-204ENST00000579057 MADDQ8WXG6 1647 aa15.43■□□□□ 0.06
LINC00271-204ENST00000579057 ZMYM4Q5VZL5 1548 aa15.43■□□□□ 0.06
LINC00271-204ENST00000579057 LRRIQ1Q96JM4 1722 aa15.4■□□□□ 0.06
LINC00271-204ENST00000579057 EHMT2Q96KQ7 1210 aa15.39■□□□□ 0.05
LINC00271-204ENST00000579057 HECW1Q76N89 1606 aa15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms