RNA–Protein interactions for RNA: ENST00000579014.5

LAMA1-207, Transcript of laminin subunit alpha 1, humanhuman

TSL 2

Gene LAMA1, Length 10,374 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA1-207ENST00000579014 TSPY10P0CW01 314 aa13.11□□□□□ -0.31
LAMA1-207ENST00000579014 ZNF326Q5BKZ1 582 aaKnown RBP13.11□□□□□ -0.31
LAMA1-207ENST00000579014 CUX2O14529 1486 aa13.1□□□□□ -0.31
LAMA1-207ENST00000579014 ZNF777Q9ULD5 760 aaPredicted RBP13.09□□□□□ -0.31
LAMA1-207ENST00000579014 PLEKHD1A6NEE1 506 aa13.09□□□□□ -0.31
LAMA1-207ENST00000579014 UPF2Q9HAU5 1272 aaKnown RBP13.07□□□□□ -0.32
LAMA1-207ENST00000579014 CARMIL1Q5VZK9 1371 aa13.07□□□□□ -0.32
LAMA1-207ENST00000579014 NCAPD3P42695 1498 aa13.07□□□□□ -0.32
LAMA1-207ENST00000579014 CARMIL2Q6F5E8 1435 aa13.06□□□□□ -0.32
LAMA1-207ENST00000579014 TRIM44Q96DX7 344 aaPredicted RBP13.04□□□□□ -0.32
LAMA1-207ENST00000579014 TONSLQ96HA7 1378 aa13.03□□□□□ -0.32
LAMA1-207ENST00000579014 SOGA1O94964 1423 aa13.03□□□□□ -0.32
LAMA1-207ENST00000579014 EIF4G1Q04637 1599 aaKnown RBP13.02□□□□□ -0.32
LAMA1-207ENST00000579014 FKBP8Q14318 412 aa13.02□□□□□ -0.33
LAMA1-207ENST00000579014 HMGXB3Q12766 1538 aa13.01□□□□□ -0.33
LAMA1-207ENST00000579014 AMER1Q5JTC6 1135 aaPredicted RBP13.01□□□□□ -0.33
LAMA1-207ENST00000579014 FMN1Q68DA7 1419 aa12.99□□□□□ -0.33
LAMA1-207ENST00000579014 NAP1L5Q96NT1 182 aaPredicted RBP12.99□□□□□ -0.33
LAMA1-207ENST00000579014 NEFMP07197 916 aa12.97□□□□□ -0.33
LAMA1-207ENST00000579014 ARID3CA6NKF2 412 aa12.96□□□□□ -0.33
LAMA1-207ENST00000579014 FANCD2Q9BXW9 1451 aa12.96□□□□□ -0.34
LAMA1-207ENST00000579014 ANP32EQ9BTT0 268 aa12.95□□□□□ -0.34
LAMA1-207ENST00000579014 RTN4Q9NQC3 1192 aaKnown RBP12.94□□□□□ -0.34
LAMA1-207ENST00000579014 NCLP19338 710 aaKnown RBP12.93□□□□□ -0.34
LAMA1-207ENST00000579014 STAG3Q9UJ98 1225 aa12.93□□□□□ -0.34
LAMA1-207ENST00000579014 RAPGEF2Q9Y4G8 1499 aa12.93□□□□□ -0.34
LAMA1-207ENST00000579014 ERICH6BQ5W0A0 696 aa12.92□□□□□ -0.34
LAMA1-207ENST00000579014 SLC24A1O60721 1099 aa12.92□□□□□ -0.34
LAMA1-207ENST00000579014 VPS8Q8N3P4 1428 aa12.91□□□□□ -0.34
LAMA1-207ENST00000579014 CFDP1Q9UEE9 299 aaPredicted RBP12.9□□□□□ -0.34
LAMA1-207ENST00000579014 DNTTIP2Q5QJE6 756 aaKnown RBP12.89□□□□□ -0.35
LAMA1-207ENST00000579014 CCNB3Q8WWL7 1395 aa12.89□□□□□ -0.35
LAMA1-207ENST00000579014 SCAF1Q9H7N4 1312 aaKnown RBP12.85□□□□□ -0.35
LAMA1-207ENST00000579014 ARHGAP35Q9NRY4 1499 aa12.84□□□□□ -0.35
LAMA1-207ENST00000579014 PTMAP06454 111 aaKnown RBP12.82□□□□□ -0.36
LAMA1-207ENST00000579014 DDRGK1Q96HY6 314 aa12.82□□□□□ -0.36
LAMA1-207ENST00000579014 KANK1Q14678 1352 aa12.81□□□□□ -0.36
LAMA1-207ENST00000579014 CCDC136Q96JN2 1154 aa12.81□□□□□ -0.36
LAMA1-207ENST00000579014 CFTRP13569 1480 aa12.8□□□□□ -0.36
LAMA1-207ENST00000579014 TIMELESSQ9UNS1 1208 aa12.8□□□□□ -0.36
LAMA1-207ENST00000579014 CCDC18Q5T9S5 1454 aa12.79□□□□□ -0.36
LAMA1-207ENST00000579014 CDCA8Q53HL2 280 aa12.79□□□□□ -0.36
LAMA1-207ENST00000579014 RSPH4AQ5TD94 716 aa12.79□□□□□ -0.36
LAMA1-207ENST00000579014 CC2D2AQ9P2K1 1620 aa12.78□□□□□ -0.36
LAMA1-207ENST00000579014 HNRNPUQ00839 825 aaKnown RBP eCLIP12.78□□□□□ -0.36
LAMA1-207ENST00000579014 BECN1Q14457 450 aa12.78□□□□□ -0.36
LAMA1-207ENST00000579014 CHIC2Q9UKJ5 165 aa12.77□□□□□ -0.37
LAMA1-207ENST00000579014 TDRD9Q8NDG6 1382 aaKnown RBP12.77□□□□□ -0.37
LAMA1-207ENST00000579014 KCNH8Q96L42 1107 aa12.77□□□□□ -0.37
LAMA1-207ENST00000579014 CHGAP10645 457 aaKnown RBP12.76□□□□□ -0.37
LAMA1-207ENST00000579014 GOLGA6L22H0YM25 854 aa12.75□□□□□ -0.37
LAMA1-207ENST00000579014 GAPVD1Q14C86 1478 aa12.75□□□□□ -0.37
LAMA1-207ENST00000579014 FGD5Q6ZNL6 1462 aa12.75□□□□□ -0.37
LAMA1-207ENST00000579014 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.74□□□□□ -0.37
LAMA1-207ENST00000579014 PEG3Q9GZU2 1588 aa12.74□□□□□ -0.37
LAMA1-207ENST00000579014 LAMC3Q9Y6N6 1575 aa12.73□□□□□ -0.37
LAMA1-207ENST00000579014 MRC2Q9UBG0 1479 aa12.73□□□□□ -0.37
LAMA1-207ENST00000579014 ERICH3Q5RHP9 1530 aa12.72□□□□□ -0.37
LAMA1-207ENST00000579014 HDGFP51858 240 aaKnown RBP12.72□□□□□ -0.37
LAMA1-207ENST00000579014 IFT140Q96RY7 1462 aa12.71□□□□□ -0.38
LAMA1-207ENST00000579014 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.71□□□□□ -0.38
LAMA1-207ENST00000579014 BICRAQ9NZM4 1560 aa12.7□□□□□ -0.38
LAMA1-207ENST00000579014 EIF4G2P78344 907 aaKnown RBP eCLIP12.7□□□□□ -0.38
LAMA1-207ENST00000579014 FAM9BQ8IZU0 186 aa12.69□□□□□ -0.38
LAMA1-207ENST00000579014 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.69□□□□□ -0.38
LAMA1-207ENST00000579014 TNNT3P45378 269 aaPredicted RBP12.69□□□□□ -0.38
LAMA1-207ENST00000579014 GRIN2BQ13224 1484 aa12.69□□□□□ -0.38
LAMA1-207ENST00000579014 KIF21BO75037 1637 aa12.68□□□□□ -0.38
LAMA1-207ENST00000579014 EFCAB2Q5VUJ9 269 aa12.68□□□□□ -0.38
LAMA1-207ENST00000579014 PPP1R15AO75807 674 aaPredicted RBP12.68□□□□□ -0.38
LAMA1-207ENST00000579014 CHAF1AQ13111 956 aaPredicted RBP12.67□□□□□ -0.38
LAMA1-207ENST00000579014 RRP7BPQ9NSQ0 103 aa12.67□□□□□ -0.38
LAMA1-207ENST00000579014 TOP2BQ02880 1626 aa12.67□□□□□ -0.38
LAMA1-207ENST00000579014 DNMBPQ6XZF7 1577 aa12.66□□□□□ -0.38
LAMA1-207ENST00000579014 ANKRD30AQ9BXX3 1397 aa12.66□□□□□ -0.38
LAMA1-207ENST00000579014 DDX10Q13206 875 aaKnown RBP12.66□□□□□ -0.38
LAMA1-207ENST00000579014 PPM1GO15355 546 aaPredicted RBP12.65□□□□□ -0.38
LAMA1-207ENST00000579014 ZRSR1Q15695 479 aaKnown RBP12.64□□□□□ -0.39
LAMA1-207ENST00000579014 CUX1P39880 1505 aa12.64□□□□□ -0.39
LAMA1-207ENST00000579014 ARID4BQ4LE39 1312 aaPredicted RBP12.64□□□□□ -0.39
LAMA1-207ENST00000579014 SETD5Q9C0A6 1442 aa12.64□□□□□ -0.39
LAMA1-207ENST00000579014 EFCAB5A4FU69 1503 aa12.64□□□□□ -0.39
LAMA1-207ENST00000579014 DEKP35659 375 aaKnown RBP12.63□□□□□ -0.39
LAMA1-207ENST00000579014 JPH4Q96JJ6 628 aa12.62□□□□□ -0.39
LAMA1-207ENST00000579014 UNC13AQ9UPW8 1703 aa12.62□□□□□ -0.39
LAMA1-207ENST00000579014 MSNP26038 577 aaKnown RBP12.62□□□□□ -0.39
LAMA1-207ENST00000579014 CALRP27797 417 aaKnown RBP12.61□□□□□ -0.39
LAMA1-207ENST00000579014 GOLGA6L6A8MZA4 724 aa12.61□□□□□ -0.39
LAMA1-207ENST00000579014 MRS2Q9HD23 443 aa12.61□□□□□ -0.39
LAMA1-207ENST00000579014 NOP58Q9Y2X3 529 aaKnown RBP12.6□□□□□ -0.39
LAMA1-207ENST00000579014 IRX6P78412 446 aaPredicted RBP12.6□□□□□ -0.39
LAMA1-207ENST00000579014 PTPRGP23470 1445 aa12.59□□□□□ -0.39
LAMA1-207ENST00000579014 LAS1LQ9Y4W2 734 aaKnown RBP12.59□□□□□ -0.39
LAMA1-207ENST00000579014 MYH16Q9H6N6 1097 aa12.59□□□□□ -0.39
LAMA1-207ENST00000579014 OSCARQ8IYS5 282 aa12.58□□□□□ -0.4
LAMA1-207ENST00000579014 MIER1Q8N108 512 aa12.58□□□□□ -0.4
LAMA1-207ENST00000579014 IGF1RP08069 1367 aa12.58□□□□□ -0.4
LAMA1-207ENST00000579014 TOPBP1Q92547 1522 aa12.57□□□□□ -0.4
LAMA1-207ENST00000579014 WDR43Q15061 677 aaKnown RBP eCLIP12.57□□□□□ -0.4
LAMA1-207ENST00000579014 TMC1Q8TDI8 760 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms