RNA–Protein interactions for RNA: ENST00000578922.1

SMG8-203, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

BASIC

Gene SMG8, Length 2,178 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-203ENST00000578922 ARHGAP35Q9NRY4 1499 aa31.55■■■□□ 2.64
SMG8-203ENST00000578922 TTBK1Q5TCY1 1321 aaPredicted RBP31.54■■■□□ 2.64
SMG8-203ENST00000578922 TRIM26Q12899 539 aaPredicted RBP31.54■■■□□ 2.64
SMG8-203ENST00000578922 SNAPC4Q5SXM2 1469 aa31.52■■■□□ 2.64
SMG8-203ENST00000578922 CTTNBP2Q8WZ74 1663 aa31.5■■■□□ 2.63
SMG8-203ENST00000578922 P3H3Q8IVL6 736 aa31.45■■■□□ 2.63
SMG8-203ENST00000578922 FBLN2P98095 1184 aa31.35■■■□□ 2.61
SMG8-203ENST00000578922 APLP2Q06481 763 aa31.35■■■□□ 2.61
SMG8-203ENST00000578922 MAGI1Q96QZ7 1491 aaPredicted RBP31.35■■■□□ 2.61
SMG8-203ENST00000578922 CHMP7Q8WUX9 453 aaPredicted RBP31.32■■■□□ 2.6
SMG8-203ENST00000578922 FHOD3Q2V2M9 1422 aa31.31■■■□□ 2.6
SMG8-203ENST00000578922 GRIN2AQ12879 1464 aa31.3■■■□□ 2.6
SMG8-203ENST00000578922 SYNJ2O15056 1496 aa31.26■■■□□ 2.6
SMG8-203ENST00000578922 EFCAB5A4FU69 1503 aa31.26■■■□□ 2.6
SMG8-203ENST00000578922 IQGAP2Q13576 1575 aa31.23■■■□□ 2.59
SMG8-203ENST00000578922 SAMD9Q5K651 1589 aa31.17■■■□□ 2.58
SMG8-203ENST00000578922 ATP1B4Q9UN42 357 aaPredicted RBP31.15■■■□□ 2.58
SMG8-203ENST00000578922 KIAA0586Q9BVV6 1533 aa31.13■■■□□ 2.57
SMG8-203ENST00000578922 CEP170Q5SW79 1584 aa31.12■■■□□ 2.57
SMG8-203ENST00000578922 KANK4Q5T7N3 995 aaPredicted RBP31.11■■■□□ 2.57
SMG8-203ENST00000578922 PCF11O94913 1555 aaKnown RBP31.09■■■□□ 2.57
SMG8-203ENST00000578922 FMN1Q68DA7 1419 aa31.04■■■□□ 2.56
SMG8-203ENST00000578922 NUP160Q12769 1436 aa31.02■■■□□ 2.56
SMG8-203ENST00000578922 UGGT2Q9NYU1 1516 aa31.02■■■□□ 2.56
SMG8-203ENST00000578922 CASKIN1Q8WXD9 1431 aa30.98■■■□□ 2.55
SMG8-203ENST00000578922 FYCO1Q9BQS8 1478 aa30.97■■■□□ 2.55
SMG8-203ENST00000578922 TIAM1Q13009 1591 aa30.96■■■□□ 2.55
SMG8-203ENST00000578922 CHD1O14646 1710 aa30.96■■■□□ 2.55
SMG8-203ENST00000578922 DISP1Q96F81 1524 aa30.94■■■□□ 2.54
SMG8-203ENST00000578922 ZEB1P37275 1124 aaPredicted RBP30.93■■■□□ 2.54
SMG8-203ENST00000578922 JPH4Q96JJ6 628 aa30.9■■■□□ 2.54
SMG8-203ENST00000578922 KIAA0556O60303 1618 aa30.9■■■□□ 2.54
SMG8-203ENST00000578922 MAP3K1Q13233 1512 aa30.88■■■□□ 2.53
SMG8-203ENST00000578922 CFAP43Q8NDM7 1665 aa30.85■■■□□ 2.53
SMG8-203ENST00000578922 LRRC9Q6ZRR7 1453 aa30.83■■■□□ 2.53
SMG8-203ENST00000578922 LRRIQ1Q96JM4 1722 aa30.78■■■□□ 2.52
SMG8-203ENST00000578922 ARID3CA6NKF2 412 aa30.77■■■□□ 2.52
SMG8-203ENST00000578922 CARMIL2Q6F5E8 1435 aa30.76■■■□□ 2.52
SMG8-203ENST00000578922 HECW1Q76N89 1606 aa30.71■■■□□ 2.51
SMG8-203ENST00000578922 HNRNPUL2Q1KMD3 747 aaKnown RBP30.71■■■□□ 2.51
SMG8-203ENST00000578922 PRG4Q92954 1404 aaPredicted RBP30.69■■■□□ 2.5
SMG8-203ENST00000578922 MTUS2Q5JR59 1369 aa30.66■■■□□ 2.5
SMG8-203ENST00000578922 EPRSP07814 1512 aaKnown RBP30.64■■■□□ 2.49
SMG8-203ENST00000578922 CDK13Q14004 1512 aaKnown RBP30.64■■■□□ 2.49
SMG8-203ENST00000578922 CCDC18Q5T9S5 1454 aa30.63■■■□□ 2.49
SMG8-203ENST00000578922 PHLDB1Q86UU1 1377 aa30.63■■■□□ 2.49
SMG8-203ENST00000578922 RAPGEF6Q8TEU7 1601 aa30.61■■■□□ 2.49
SMG8-203ENST00000578922 PLB1Q6P1J6 1458 aa30.61■■■□□ 2.49
SMG8-203ENST00000578922 RRBP1Q9P2E9 1410 aaKnown RBP30.6■■■□□ 2.49
SMG8-203ENST00000578922 NUP153P49790 1475 aaKnown RBP30.58■■■□□ 2.49
SMG8-203ENST00000578922 CCNB3Q8WWL7 1395 aa30.57■■■□□ 2.48
SMG8-203ENST00000578922 MAGI3Q5TCQ9 1506 aa30.56■■■□□ 2.48
SMG8-203ENST00000578922 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP30.55■■■□□ 2.48
SMG8-203ENST00000578922 SHROOM2Q13796 1616 aa30.55■■■□□ 2.48
SMG8-203ENST00000578922 CLASP1Q7Z460 1538 aa30.53■■■□□ 2.48
SMG8-203ENST00000578922 EHBP1L1Q8N3D4 1523 aa30.51■■■□□ 2.47
SMG8-203ENST00000578922 ERCC6L2Q5T890 1561 aa30.51■■■□□ 2.47
SMG8-203ENST00000578922 PTPRGP23470 1445 aa30.5■■■□□ 2.47
SMG8-203ENST00000578922 ITGAEP38570 1179 aa30.49■■■□□ 2.47
SMG8-203ENST00000578922 NCOA2Q15596 1464 aa30.46■■■□□ 2.47
SMG8-203ENST00000578922 FAM50AQ14320 339 aaKnown RBP30.45■■■□□ 2.47
SMG8-203ENST00000578922 SUPT6HQ7KZ85 1726 aaKnown RBP30.44■■■□□ 2.46
SMG8-203ENST00000578922 ABCA8O94911 1581 aa30.43■■■□□ 2.46
SMG8-203ENST00000578922 CCER1Q8TC90 406 aaPredicted RBP30.39■■■□□ 2.46
SMG8-203ENST00000578922 CDK11AQ9UQ88 783 aaPredicted RBP30.37■■■□□ 2.45
SMG8-203ENST00000578922 FGD6Q6ZV73 1430 aa30.35■■■□□ 2.45
SMG8-203ENST00000578922 OSCARQ8IYS5 282 aa30.32■■■□□ 2.44
SMG8-203ENST00000578922 MYOM3Q5VTT5 1437 aa30.32■■■□□ 2.44
SMG8-203ENST00000578922 ARHGEF11O15085 1522 aa30.32■■■□□ 2.44
SMG8-203ENST00000578922 ATP10BO94823 1461 aa30.3■■■□□ 2.44
SMG8-203ENST00000578922 UACAQ9BZF9 1416 aa30.29■■■□□ 2.44
SMG8-203ENST00000578922 TROQ12816 1431 aaPredicted RBP30.25■■■□□ 2.43
SMG8-203ENST00000578922 PLEKHD1A6NEE1 506 aa30.22■■■□□ 2.43
SMG8-203ENST00000578922 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP30.18■■■□□ 2.42
SMG8-203ENST00000578922 PTPN23Q9H3S7 1636 aa30.17■■■□□ 2.42
SMG8-203ENST00000578922 KIF14Q15058 1648 aa30.17■■■□□ 2.42
SMG8-203ENST00000578922 ABCC2Q92887 1545 aa30.17■■■□□ 2.42
SMG8-203ENST00000578922 MIA2Q96PC5 1412 aa30.09■■■□□ 2.41
SMG8-203ENST00000578922 ADCY10Q96PN6 1610 aa30.09■■■□□ 2.41
SMG8-203ENST00000578922 PTPRKQ15262 1439 aa30.06■■■□□ 2.4
SMG8-203ENST00000578922 TCOF1Q13428 1488 aaKnown RBP30.06■■■□□ 2.4
SMG8-203ENST00000578922 ZNF644Q9H582 1327 aaPredicted RBP30.04■■■□□ 2.4
SMG8-203ENST00000578922 RAB3GAP2Q9H2M9 1393 aa30.03■■■□□ 2.4
SMG8-203ENST00000578922 UHRF1BP1LA0JNW5 1464 aa30.02■■■□□ 2.4
SMG8-203ENST00000578922 CFDP1Q9UEE9 299 aaPredicted RBP30.02■■■□□ 2.4
SMG8-203ENST00000578922 GPATCH8Q9UKJ3 1502 aaKnown RBP30.02■■■□□ 2.4
SMG8-203ENST00000578922 SETD5Q9C0A6 1442 aa30.01■■■□□ 2.39
SMG8-203ENST00000578922 ZNF777Q9ULD5 760 aaPredicted RBP30■■■□□ 2.39
SMG8-203ENST00000578922 ZCCHC11Q5TAX3 1644 aaKnown RBP29.98■■■□□ 2.39
SMG8-203ENST00000578922 CHIC2Q9UKJ5 165 aa29.98■■■□□ 2.39
SMG8-203ENST00000578922 ABCC10Q5T3U5 1492 aa29.98■■■□□ 2.39
SMG8-203ENST00000578922 ITSN2Q9NZM3 1697 aa29.96■■■□□ 2.39
SMG8-203ENST00000578922 KDM5BQ9UGL1 1544 aa29.96■■■□□ 2.39
SMG8-203ENST00000578922 KCNH8Q96L42 1107 aa29.96■■■□□ 2.39
SMG8-203ENST00000578922 DHX57Q6P158 1386 aaKnown RBP29.94■■■□□ 2.38
SMG8-203ENST00000578922 CDC42BPAQ5VT25 1732 aa29.91■■■□□ 2.38
SMG8-203ENST00000578922 CAMSAP2Q08AD1 1489 aa29.9■■■□□ 2.38
SMG8-203ENST00000578922 RRP7BPQ9NSQ0 103 aa29.88■■■□□ 2.37
SMG8-203ENST00000578922 DAPK1P53355 1430 aa29.85■■■□□ 2.37
SMG8-203ENST00000578922 HFM1A2PYH4 1435 aa29.85■■■□□ 2.37
Retrieved 100 of 20,778 RNA–protein pairs in 203.9 ms