RNA–Protein interactions for RNA: ENST00000578896.1

GGA3-207, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 5

Gene GGA3, Length 439 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-207ENST00000578896 KIF27Q86VH2 1401 aa15.59■□□□□ 0.09
GGA3-207ENST00000578896 TTBK1Q5TCY1 1321 aaPredicted RBP15.55■□□□□ 0.08
GGA3-207ENST00000578896 CARMIL1Q5VZK9 1371 aa15.52■□□□□ 0.08
GGA3-207ENST00000578896 KIAA0586Q9BVV6 1533 aa15.52■□□□□ 0.07
GGA3-207ENST00000578896 KIF13AQ9H1H9 1805 aa15.52■□□□□ 0.07
GGA3-207ENST00000578896 CUL7Q14999 1698 aa15.51■□□□□ 0.07
GGA3-207ENST00000578896 NPM1P06748 294 aaKnown RBP eCLIP15.49■□□□□ 0.07
GGA3-207ENST00000578896 FAM69CQ0P6D2 419 aa15.48■□□□□ 0.07
GGA3-207ENST00000578896 ADCY10Q96PN6 1610 aa15.47■□□□□ 0.07
GGA3-207ENST00000578896 AEBP2Q6ZN18 517 aaPredicted RBP15.47■□□□□ 0.07
GGA3-207ENST00000578896 ABCC10Q5T3U5 1492 aa15.42■□□□□ 0.06
GGA3-207ENST00000578896 PTPRGP23470 1445 aa15.42■□□□□ 0.06
GGA3-207ENST00000578896 MAPKBP1O60336 1514 aa15.39■□□□□ 0.05
GGA3-207ENST00000578896 TSPOAP1O95153 1857 aa15.38■□□□□ 0.05
GGA3-207ENST00000578896 DIP2BQ9P265 1576 aa15.38■□□□□ 0.05
GGA3-207ENST00000578896 TNIKQ9UKE5 1360 aa15.37■□□□□ 0.05
GGA3-207ENST00000578896 IQGAP2Q13576 1575 aa15.37■□□□□ 0.05
GGA3-207ENST00000578896 CARMIL2Q6F5E8 1435 aa15.36■□□□□ 0.05
GGA3-207ENST00000578896 RAPGEF2Q9Y4G8 1499 aa15.34■□□□□ 0.05
GGA3-207ENST00000578896 DISP1Q96F81 1524 aa15.33■□□□□ 0.05
GGA3-207ENST00000578896 ABCC2Q92887 1545 aa15.29■□□□□ 0.04
GGA3-207ENST00000578896 ASXL2Q76L83 1435 aa15.28■□□□□ 0.04
GGA3-207ENST00000578896 UACAQ9BZF9 1416 aa15.28■□□□□ 0.04
GGA3-207ENST00000578896 UGGT2Q9NYU1 1516 aa15.27■□□□□ 0.03
GGA3-207ENST00000578896 KDM6BO15054 1643 aa15.25■□□□□ 0.03
GGA3-207ENST00000578896 KIAA0556O60303 1618 aa15.25■□□□□ 0.03
GGA3-207ENST00000578896 UHRF1BP1LA0JNW5 1464 aa15.24■□□□□ 0.03
GGA3-207ENST00000578896 PLB1Q6P1J6 1458 aa15.22■□□□□ 0.03
GGA3-207ENST00000578896 CTTNBP2Q8WZ74 1663 aa15.21■□□□□ 0.03
GGA3-207ENST00000578896 PPRC1Q5VV67 1664 aaKnown RBP15.2■□□□□ 0.02
GGA3-207ENST00000578896 ZCCHC11Q5TAX3 1644 aaKnown RBP15.2■□□□□ 0.02
GGA3-207ENST00000578896 KDM5BQ9UGL1 1544 aa15.19■□□□□ 0.02
GGA3-207ENST00000578896 P3H3Q8IVL6 736 aa15.19■□□□□ 0.02
GGA3-207ENST00000578896 PRXQ9BXM0 1461 aa15.19■□□□□ 0.02
GGA3-207ENST00000578896 KDM4FA0A1W2PPD8 638 aa15.18■□□□□ 0.02
GGA3-207ENST00000578896 GLI2P10070 1586 aa15.18■□□□□ 0.02
GGA3-207ENST00000578896 EPRSP07814 1512 aaKnown RBP15.17■□□□□ 0.02
GGA3-207ENST00000578896 ARID3CA6NKF2 412 aa15.16■□□□□ 0.02
GGA3-207ENST00000578896 KCNH8Q96L42 1107 aa15.15■□□□□ 0.02
GGA3-207ENST00000578896 COL17A1Q9UMD9 1497 aaPredicted RBP15.14■□□□□ 0.01
GGA3-207ENST00000578896 GOLGA3Q08378 1498 aa15.13■□□□□ 0.01
GGA3-207ENST00000578896 RANGAP1P46060 587 aaPredicted RBP15.12■□□□□ 0.01
GGA3-207ENST00000578896 FAM9AQ8IZU1 332 aaPredicted RBP15.12■□□□□ 0.01
GGA3-207ENST00000578896 CSRNP3Q8WYN3 585 aa15.12■□□□□ 0.01
GGA3-207ENST00000578896 MAP3K4Q9Y6R4 1608 aa15.11■□□□□ 0.01
GGA3-207ENST00000578896 ABCA8O94911 1581 aa15.11■□□□□ 0.01
GGA3-207ENST00000578896 WDR7Q9Y4E6 1490 aa15.1■□□□□ 0.01
GGA3-207ENST00000578896 TEX14Q8IWB6 1497 aa15.04■□□□□ -0
GGA3-207ENST00000578896 CD109Q6YHK3 1445 aa15.04■□□□□ -0
GGA3-207ENST00000578896 EHMT2Q96KQ7 1210 aa15.03■□□□□ -0
GGA3-207ENST00000578896 ATP10BO94823 1461 aa15.01□□□□□ -0.01
GGA3-207ENST00000578896 ADGRL1O94910 1474 aa15.01□□□□□ -0.01
GGA3-207ENST00000578896 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15□□□□□ -0.01
GGA3-207ENST00000578896 HNRNPUL2Q1KMD3 747 aaKnown RBP15□□□□□ -0.01
GGA3-207ENST00000578896 CFAP43Q8NDM7 1665 aa14.99□□□□□ -0.01
GGA3-207ENST00000578896 SAMD9Q5K651 1589 aa14.98□□□□□ -0.01
GGA3-207ENST00000578896 MAGI3Q5TCQ9 1506 aa14.98□□□□□ -0.01
GGA3-207ENST00000578896 FHOD3Q2V2M9 1422 aa14.97□□□□□ -0.01
GGA3-207ENST00000578896 EEA1Q15075 1411 aa14.95□□□□□ -0.02
GGA3-207ENST00000578896 RAPGEF6Q8TEU7 1601 aa14.95□□□□□ -0.02
GGA3-207ENST00000578896 NUP153P49790 1475 aaKnown RBP14.91□□□□□ -0.02
GGA3-207ENST00000578896 RAPGEF3O95398 923 aa14.89□□□□□ -0.03
GGA3-207ENST00000578896 CHIC1Q5VXU3 224 aa14.89□□□□□ -0.03
GGA3-207ENST00000578896 ABCA9Q8IUA7 1624 aa14.88□□□□□ -0.03
GGA3-207ENST00000578896 UBTFP17480 764 aaKnown RBP14.87□□□□□ -0.03
GGA3-207ENST00000578896 KIF21BO75037 1637 aa14.87□□□□□ -0.03
GGA3-207ENST00000578896 ARAP3Q8WWN8 1544 aa14.86□□□□□ -0.03
GGA3-207ENST00000578896 PLEKHD1A6NEE1 506 aa14.85□□□□□ -0.03
GGA3-207ENST00000578896 ATP1B4Q9UN42 357 aaPredicted RBP14.84□□□□□ -0.03
GGA3-207ENST00000578896 CDK13Q14004 1512 aaKnown RBP14.81□□□□□ -0.04
GGA3-207ENST00000578896 EFCAB5A4FU69 1503 aa14.8□□□□□ -0.04
GGA3-207ENST00000578896 PHLDB1Q86UU1 1377 aa14.79□□□□□ -0.04
GGA3-207ENST00000578896 NEO1Q92859 1461 aa14.79□□□□□ -0.04
GGA3-207ENST00000578896 HECW2Q9P2P5 1572 aa14.79□□□□□ -0.04
GGA3-207ENST00000578896 FRMPD1Q5SYB0 1578 aa14.77□□□□□ -0.04
GGA3-207ENST00000578896 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.77□□□□□ -0.04
GGA3-207ENST00000578896 ARID4BQ4LE39 1312 aaPredicted RBP14.77□□□□□ -0.04
GGA3-207ENST00000578896 TTC37Q6PGP7 1564 aa14.77□□□□□ -0.05
GGA3-207ENST00000578896 ARHGAP35Q9NRY4 1499 aa14.76□□□□□ -0.05
GGA3-207ENST00000578896 AKNAQ7Z591 1439 aa14.75□□□□□ -0.05
GGA3-207ENST00000578896 FANCAO15360 1455 aa14.74□□□□□ -0.05
GGA3-207ENST00000578896 ILDR1Q86SU0 546 aaPredicted RBP14.73□□□□□ -0.05
GGA3-207ENST00000578896 DENND4BO75064 1496 aaPredicted RBP14.73□□□□□ -0.05
GGA3-207ENST00000578896 ADAMTSL3P82987 1691 aa14.71□□□□□ -0.05
GGA3-207ENST00000578896 PLPPR3Q6T4P5 718 aa14.71□□□□□ -0.05
GGA3-207ENST00000578896 RICTORQ6R327 1708 aa14.71□□□□□ -0.05
GGA3-207ENST00000578896 PTPRMP28827 1452 aa14.69□□□□□ -0.06
GGA3-207ENST00000578896 FMN1Q68DA7 1419 aa14.69□□□□□ -0.06
GGA3-207ENST00000578896 BCORL1Q5H9F3 1711 aa14.69□□□□□ -0.06
GGA3-207ENST00000578896 YEATS2Q9ULM3 1422 aa14.67□□□□□ -0.06
GGA3-207ENST00000578896 HECW1Q76N89 1606 aa14.67□□□□□ -0.06
GGA3-207ENST00000578896 MADDQ8WXG6 1647 aa14.67□□□□□ -0.06
GGA3-207ENST00000578896 MLECQ14165 292 aa14.67□□□□□ -0.06
GGA3-207ENST00000578896 PLCH2O75038 1416 aa14.66□□□□□ -0.06
GGA3-207ENST00000578896 SCAPERQ9BY12 1400 aa14.66□□□□□ -0.06
GGA3-207ENST00000578896 ARHGEF40Q8TER5 1519 aa14.66□□□□□ -0.06
GGA3-207ENST00000578896 LRRIQ1Q96JM4 1722 aa14.66□□□□□ -0.06
GGA3-207ENST00000578896 CFAP74Q9C0B2 1584 aa14.66□□□□□ -0.06
GGA3-207ENST00000578896 KIF14Q15058 1648 aa14.66□□□□□ -0.06
GGA3-207ENST00000578896 CDK11AQ9UQ88 783 aaPredicted RBP14.65□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms