RNA–Protein interactions for RNA: ENST00000578706.5

UBB-208, Transcript of ubiquitin B, humanhuman

TSL 3

Gene UBB, Length 500 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBB-208ENST00000578706 ADAMTS12P58397 1594 aa11.89□□□□□ -0.51
UBB-208ENST00000578706 ABCA10Q8WWZ4 1543 aa11.86□□□□□ -0.51
UBB-208ENST00000578706 ADCY10Q96PN6 1610 aa11.85□□□□□ -0.51
UBB-208ENST00000578706 PRG4Q92954 1404 aaPredicted RBP11.82□□□□□ -0.52
UBB-208ENST00000578706 PPRC1Q5VV67 1664 aaKnown RBP11.81□□□□□ -0.52
UBB-208ENST00000578706 FBXO41Q8TF61 875 aa11.81□□□□□ -0.52
UBB-208ENST00000578706 FHAD1B1AJZ9 1412 aa11.76□□□□□ -0.53
UBB-208ENST00000578706 COL17A1Q9UMD9 1497 aaPredicted RBP11.75□□□□□ -0.53
UBB-208ENST00000578706 RUSC2Q8N2Y8 1516 aa11.75□□□□□ -0.53
UBB-208ENST00000578706 JPH4Q96JJ6 628 aa11.72□□□□□ -0.53
UBB-208ENST00000578706 LMTK3Q96Q04 1460 aa11.71□□□□□ -0.53
UBB-208ENST00000578706 NPM1P06748 294 aaKnown RBP eCLIP11.71□□□□□ -0.53
UBB-208ENST00000578706 ERICH3Q5RHP9 1530 aa11.68□□□□□ -0.54
UBB-208ENST00000578706 GLI2P10070 1586 aa11.67□□□□□ -0.54
UBB-208ENST00000578706 CHIC1Q5VXU3 224 aa11.65□□□□□ -0.54
UBB-208ENST00000578706 ILDR2Q71H61 639 aa11.64□□□□□ -0.55
UBB-208ENST00000578706 WRNQ14191 1432 aaPredicted RBP eCLIP11.63□□□□□ -0.55
UBB-208ENST00000578706 MAP3K4Q9Y6R4 1608 aa11.63□□□□□ -0.55
UBB-208ENST00000578706 TOP2BQ02880 1626 aa11.62□□□□□ -0.55
UBB-208ENST00000578706 ASXL2Q76L83 1435 aa11.61□□□□□ -0.55
UBB-208ENST00000578706 SOCS7O14512 581 aa11.61□□□□□ -0.55
UBB-208ENST00000578706 BIVM-ERCC5R4GMW8 1640 aa11.6□□□□□ -0.55
UBB-208ENST00000578706 ABCC2Q92887 1545 aa11.6□□□□□ -0.55
UBB-208ENST00000578706 CUL7Q14999 1698 aa11.59□□□□□ -0.55
UBB-208ENST00000578706 PLB1Q6P1J6 1458 aa11.57□□□□□ -0.56
UBB-208ENST00000578706 KIF21BO75037 1637 aa11.56□□□□□ -0.56
UBB-208ENST00000578706 EPRSP07814 1512 aaKnown RBP11.55□□□□□ -0.56
UBB-208ENST00000578706 KIAA0586Q9BVV6 1533 aa11.55□□□□□ -0.56
UBB-208ENST00000578706 TEX14Q8IWB6 1497 aa11.53□□□□□ -0.56
UBB-208ENST00000578706 PTPRGP23470 1445 aa11.52□□□□□ -0.56
UBB-208ENST00000578706 DISP3Q9P2K9 1392 aa11.51□□□□□ -0.57
UBB-208ENST00000578706 UHRF1BP1LA0JNW5 1464 aa11.51□□□□□ -0.57
UBB-208ENST00000578706 ADAMTSL3P82987 1691 aa11.5□□□□□ -0.57
UBB-208ENST00000578706 PTPRMP28827 1452 aa11.5□□□□□ -0.57
UBB-208ENST00000578706 PCF11O94913 1555 aaKnown RBP11.5□□□□□ -0.57
UBB-208ENST00000578706 ZCCHC11Q5TAX3 1644 aaKnown RBP11.47□□□□□ -0.57
UBB-208ENST00000578706 KDM5BQ9UGL1 1544 aa11.47□□□□□ -0.57
UBB-208ENST00000578706 TTBK1Q5TCY1 1321 aaPredicted RBP11.46□□□□□ -0.57
UBB-208ENST00000578706 TNIKQ9UKE5 1360 aa11.45□□□□□ -0.58
UBB-208ENST00000578706 SPATA31D1Q6ZQQ2 1576 aa11.44□□□□□ -0.58
UBB-208ENST00000578706 UACAQ9BZF9 1416 aa11.43□□□□□ -0.58
UBB-208ENST00000578706 MADDQ8WXG6 1647 aa11.42□□□□□ -0.58
UBB-208ENST00000578706 MAGI3Q5TCQ9 1506 aa11.41□□□□□ -0.58
UBB-208ENST00000578706 CFAP43Q8NDM7 1665 aa11.4□□□□□ -0.58
UBB-208ENST00000578706 CERKQ8TCT0 537 aa11.4□□□□□ -0.58
UBB-208ENST00000578706 DISP1Q96F81 1524 aa11.4□□□□□ -0.59
UBB-208ENST00000578706 WDR7Q9Y4E6 1490 aa11.39□□□□□ -0.59
UBB-208ENST00000578706 BCORL1Q5H9F3 1711 aa11.39□□□□□ -0.59
UBB-208ENST00000578706 CARMIL2Q6F5E8 1435 aa11.38□□□□□ -0.59
UBB-208ENST00000578706 IGF1RP08069 1367 aa11.38□□□□□ -0.59
UBB-208ENST00000578706 IQGAP2Q13576 1575 aa11.37□□□□□ -0.59
UBB-208ENST00000578706 HSPA2P54652 639 aa11.36□□□□□ -0.59
UBB-208ENST00000578706 CD109Q6YHK3 1445 aa11.35□□□□□ -0.59
UBB-208ENST00000578706 ARAP3Q8WWN8 1544 aa11.35□□□□□ -0.59
UBB-208ENST00000578706 RIMS1Q86UR5 1692 aaKnown RBP11.33□□□□□ -0.6
UBB-208ENST00000578706 FRMPD1Q5SYB0 1578 aa11.3□□□□□ -0.6
UBB-208ENST00000578706 KIAA0556O60303 1618 aa11.3□□□□□ -0.6
UBB-208ENST00000578706 UGGT2Q9NYU1 1516 aa11.28□□□□□ -0.6
UBB-208ENST00000578706 KIF27Q86VH2 1401 aa11.26□□□□□ -0.61
UBB-208ENST00000578706 SIGLEC1Q9BZZ2 1709 aa11.26□□□□□ -0.61
UBB-208ENST00000578706 CARMIL1Q5VZK9 1371 aa11.26□□□□□ -0.61
UBB-208ENST00000578706 KCNH8Q96L42 1107 aa11.25□□□□□ -0.61
UBB-208ENST00000578706 STRCQ7RTU9 1775 aa11.24□□□□□ -0.61
UBB-208ENST00000578706 ARHGEF40Q8TER5 1519 aa11.24□□□□□ -0.61
UBB-208ENST00000578706 ABCA8O94911 1581 aa11.24□□□□□ -0.61
UBB-208ENST00000578706 RAPGEF3O95398 923 aa11.23□□□□□ -0.61
UBB-208ENST00000578706 ABCA9Q8IUA7 1624 aa11.21□□□□□ -0.61
UBB-208ENST00000578706 ARID4BQ4LE39 1312 aaPredicted RBP11.19□□□□□ -0.62
UBB-208ENST00000578706 TTC37Q6PGP7 1564 aa11.19□□□□□ -0.62
UBB-208ENST00000578706 PREX1Q8TCU6 1659 aa11.18□□□□□ -0.62
UBB-208ENST00000578706 PLPPR3Q6T4P5 718 aa11.18□□□□□ -0.62
UBB-208ENST00000578706 RICTORQ6R327 1708 aa11.18□□□□□ -0.62
UBB-208ENST00000578706 PHLDB1Q86UU1 1377 aa11.17□□□□□ -0.62
UBB-208ENST00000578706 LTBP4Q8N2S1 1624 aa11.17□□□□□ -0.62
UBB-208ENST00000578706 FER1L4A9Z1Z3 1794 aa11.17□□□□□ -0.62
UBB-208ENST00000578706 NEO1Q92859 1461 aa11.17□□□□□ -0.62
UBB-208ENST00000578706 YEATS2Q9ULM3 1422 aa11.16□□□□□ -0.62
UBB-208ENST00000578706 FANCAO15360 1455 aa11.12□□□□□ -0.63
UBB-208ENST00000578706 ATP10BO94823 1461 aa11.11□□□□□ -0.63
UBB-208ENST00000578706 IQSEC2Q5JU85 1478 aa11.11□□□□□ -0.63
UBB-208ENST00000578706 CTTNBP2Q8WZ74 1663 aa11.11□□□□□ -0.63
UBB-208ENST00000578706 ZMYM4Q5VZL5 1548 aa11.1□□□□□ -0.63
UBB-208ENST00000578706 ARHGEF12Q9NZN5 1544 aa11.09□□□□□ -0.63
UBB-208ENST00000578706 RAPGEF2Q9Y4G8 1499 aa11.09□□□□□ -0.63
UBB-208ENST00000578706 PTPRTO14522 1441 aa11.09□□□□□ -0.63
UBB-208ENST00000578706 FHOD3Q2V2M9 1422 aa11.09□□□□□ -0.63
UBB-208ENST00000578706 POGZQ7Z3K3 1410 aa11.09□□□□□ -0.63
UBB-208ENST00000578706 ARID3CA6NKF2 412 aa11.08□□□□□ -0.64
UBB-208ENST00000578706 ZFYVE16Q7Z3T8 1539 aa11.08□□□□□ -0.64
UBB-208ENST00000578706 MED1Q15648 1581 aaPredicted RBP11.07□□□□□ -0.64
UBB-208ENST00000578706 DENND4BO75064 1496 aaPredicted RBP11.07□□□□□ -0.64
UBB-208ENST00000578706 SUPT5HO00267 1087 aaKnown RBP11.07□□□□□ -0.64
UBB-208ENST00000578706 AKNAQ7Z591 1439 aa11.07□□□□□ -0.64
UBB-208ENST00000578706 DMRT2Q9Y5R5 561 aa11.06□□□□□ -0.64
UBB-208ENST00000578706 GOLGA3Q08378 1498 aa11.06□□□□□ -0.64
UBB-208ENST00000578706 MLECQ14165 292 aa11.05□□□□□ -0.64
UBB-208ENST00000578706 EFCAB5A4FU69 1503 aa11.04□□□□□ -0.64
UBB-208ENST00000578706 CEBPAP49715 358 aaPredicted RBP11.04□□□□□ -0.64
UBB-208ENST00000578706 HECW1Q76N89 1606 aa11.03□□□□□ -0.64
UBB-208ENST00000578706 UHRF1BP1Q6BDS2 1440 aa11.02□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms