RNA–Protein interactions for RNA: ENST00000578297.1

LIMD2-204, Transcript of LIM domain containing 2, humanhuman

TSL 2

Gene LIMD2, Length 760 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2-204ENST00000578297 KIAA0586Q9BVV6 1533 aa38.9■■■■□ 3.82
LIMD2-204ENST00000578297 JPH4Q96JJ6 628 aa38.9■■■■□ 3.82
LIMD2-204ENST00000578297 RAPGEF2Q9Y4G8 1499 aa38.9■■■■□ 3.82
LIMD2-204ENST00000578297 ERCC6L2Q5T890 1561 aa38.85■■■■□ 3.81
LIMD2-204ENST00000578297 PRG4Q92954 1404 aaPredicted RBP38.8■■■■□ 3.8
LIMD2-204ENST00000578297 EEA1Q15075 1411 aa38.76■■■■□ 3.8
LIMD2-204ENST00000578297 PRXQ9BXM0 1461 aa38.76■■■■□ 3.8
LIMD2-204ENST00000578297 CSRNP3Q8WYN3 585 aa38.72■■■■□ 3.79
LIMD2-204ENST00000578297 IQGAP2Q13576 1575 aa38.65■■■■□ 3.78
LIMD2-204ENST00000578297 FAM9AQ8IZU1 332 aaPredicted RBP38.53■■■■□ 3.76
LIMD2-204ENST00000578297 CTTNBP2Q8WZ74 1663 aa38.5■■■■□ 3.75
LIMD2-204ENST00000578297 CARMIL2Q6F5E8 1435 aa38.48■■■■□ 3.75
LIMD2-204ENST00000578297 UGGT2Q9NYU1 1516 aa38.47■■■■□ 3.75
LIMD2-204ENST00000578297 DISP1Q96F81 1524 aa38.4■■■■□ 3.74
LIMD2-204ENST00000578297 TNIKQ9UKE5 1360 aa38.37■■■■□ 3.73
LIMD2-204ENST00000578297 PTPRGP23470 1445 aa38.34■■■■□ 3.73
LIMD2-204ENST00000578297 KIF21BO75037 1637 aa38.34■■■■□ 3.73
LIMD2-204ENST00000578297 KIAA0556O60303 1618 aa38.29■■■■□ 3.72
LIMD2-204ENST00000578297 GOLGA3Q08378 1498 aa38.25■■■■□ 3.71
LIMD2-204ENST00000578297 ADCY10Q96PN6 1610 aa38.21■■■■□ 3.71
LIMD2-204ENST00000578297 TTBK1Q5TCY1 1321 aaPredicted RBP38.2■■■■□ 3.71
LIMD2-204ENST00000578297 TRHP20396 242 aaPredicted RBP38.2■■■■□ 3.71
LIMD2-204ENST00000578297 NPM1P06748 294 aaKnown RBP eCLIP38.13■■■■□ 3.69
LIMD2-204ENST00000578297 UACAQ9BZF9 1416 aa38.08■■■■□ 3.69
LIMD2-204ENST00000578297 UHRF1BP1LA0JNW5 1464 aa38.07■■■■□ 3.68
LIMD2-204ENST00000578297 SAMD9Q5K651 1589 aa38.03■■■■□ 3.68
LIMD2-204ENST00000578297 UBTFP17480 764 aaKnown RBP38.01■■■■□ 3.68
LIMD2-204ENST00000578297 ABCC2Q92887 1545 aa38.01■■■■□ 3.67
LIMD2-204ENST00000578297 EHMT2Q96KQ7 1210 aa38■■■■□ 3.67
LIMD2-204ENST00000578297 MAPKBP1O60336 1514 aa38■■■■□ 3.67
LIMD2-204ENST00000578297 P3H3Q8IVL6 736 aa37.96■■■■□ 3.67
LIMD2-204ENST00000578297 RANGAP1P46060 587 aaPredicted RBP37.92■■■■□ 3.66
LIMD2-204ENST00000578297 PLB1Q6P1J6 1458 aa37.91■■■■□ 3.66
LIMD2-204ENST00000578297 ABCA8O94911 1581 aa37.89■■■■□ 3.66
LIMD2-204ENST00000578297 KDM5BQ9UGL1 1544 aa37.87■■■■□ 3.65
LIMD2-204ENST00000578297 EFCAB5A4FU69 1503 aa37.86■■■■□ 3.65
LIMD2-204ENST00000578297 ABCC10Q5T3U5 1492 aa37.83■■■■□ 3.65
LIMD2-204ENST00000578297 KIF13AQ9H1H9 1805 aa37.8■■■■□ 3.64
LIMD2-204ENST00000578297 FHOD3Q2V2M9 1422 aa37.78■■■■□ 3.64
LIMD2-204ENST00000578297 ZCCHC11Q5TAX3 1644 aaKnown RBP37.77■■■■□ 3.64
LIMD2-204ENST00000578297 ASXL2Q76L83 1435 aa37.76■■■■□ 3.63
LIMD2-204ENST00000578297 DIP2BQ9P265 1576 aa37.75■■■■□ 3.63
LIMD2-204ENST00000578297 FAM69CQ0P6D2 419 aa37.74■■■■□ 3.63
LIMD2-204ENST00000578297 RAPGEF6Q8TEU7 1601 aa37.67■■■■□ 3.62
LIMD2-204ENST00000578297 ARHGAP35Q9NRY4 1499 aa37.65■■■■□ 3.62
LIMD2-204ENST00000578297 ATP10BO94823 1461 aa37.58■■■■□ 3.61
LIMD2-204ENST00000578297 WDR7Q9Y4E6 1490 aa37.57■■■■□ 3.6
LIMD2-204ENST00000578297 GLI2P10070 1586 aa37.56■■■■□ 3.6
LIMD2-204ENST00000578297 EPRSP07814 1512 aaKnown RBP37.55■■■■□ 3.6
LIMD2-204ENST00000578297 NUP153P49790 1475 aaKnown RBP37.53■■■■□ 3.6
LIMD2-204ENST00000578297 ARID3CA6NKF2 412 aa37.52■■■■□ 3.6
LIMD2-204ENST00000578297 FMN1Q68DA7 1419 aa37.52■■■■□ 3.6
LIMD2-204ENST00000578297 CLIP1P30622 1438 aa37.41■■■■□ 3.58
LIMD2-204ENST00000578297 TSPOAP1O95153 1857 aa37.41■■■■□ 3.58
LIMD2-204ENST00000578297 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP37.39■■■■□ 3.58
LIMD2-204ENST00000578297 HNRNPUL2Q1KMD3 747 aaKnown RBP37.39■■■■□ 3.58
LIMD2-204ENST00000578297 KCNH8Q96L42 1107 aa37.38■■■■□ 3.57
LIMD2-204ENST00000578297 MAP3K4Q9Y6R4 1608 aa37.37■■■■□ 3.57
LIMD2-204ENST00000578297 HECW1Q76N89 1606 aa37.32■■■■□ 3.57
LIMD2-204ENST00000578297 PPRC1Q5VV67 1664 aaKnown RBP37.31■■■■□ 3.56
LIMD2-204ENST00000578297 LOC105371045A0A1W2PR82 267 aa37.3■■■■□ 3.56
LIMD2-204ENST00000578297 ATP1B4Q9UN42 357 aaPredicted RBP37.28■■■■□ 3.56
LIMD2-204ENST00000578297 PLEKHD1A6NEE1 506 aa37.27■■■■□ 3.56
LIMD2-204ENST00000578297 CFAP43Q8NDM7 1665 aa37.26■■■■□ 3.56
LIMD2-204ENST00000578297 CDK13Q14004 1512 aaKnown RBP37.25■■■■□ 3.55
LIMD2-204ENST00000578297 CEP162Q5TB80 1403 aa37.24■■■■□ 3.55
LIMD2-204ENST00000578297 CD109Q6YHK3 1445 aa37.23■■■■□ 3.55
LIMD2-204ENST00000578297 CASKIN1Q8WXD9 1431 aa37.21■■■■□ 3.55
LIMD2-204ENST00000578297 TEX14Q8IWB6 1497 aa37.2■■■■□ 3.55
LIMD2-204ENST00000578297 ABCA9Q8IUA7 1624 aa37.18■■■■□ 3.54
LIMD2-204ENST00000578297 PCF11O94913 1555 aaKnown RBP37.17■■■■□ 3.54
LIMD2-204ENST00000578297 MAGI3Q5TCQ9 1506 aa37.17■■■■□ 3.54
LIMD2-204ENST00000578297 KDM6BO15054 1643 aa37.14■■■■□ 3.54
LIMD2-204ENST00000578297 FYCO1Q9BQS8 1478 aa37.12■■■■□ 3.53
LIMD2-204ENST00000578297 LRRIQ1Q96JM4 1722 aa37.11■■■■□ 3.53
LIMD2-204ENST00000578297 CDK11AQ9UQ88 783 aaPredicted RBP37.11■■■■□ 3.53
LIMD2-204ENST00000578297 CCDC18Q5T9S5 1454 aa37.07■■■■□ 3.52
LIMD2-204ENST00000578297 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP37■■■■□ 3.51
LIMD2-204ENST00000578297 COL17A1Q9UMD9 1497 aaPredicted RBP36.98■■■■□ 3.51
LIMD2-204ENST00000578297 TROQ12816 1431 aaPredicted RBP36.97■■■■□ 3.51
LIMD2-204ENST00000578297 TTC37Q6PGP7 1564 aa36.93■■■■□ 3.5
LIMD2-204ENST00000578297 PHLDB1Q86UU1 1377 aa36.91■■■■□ 3.5
LIMD2-204ENST00000578297 NEO1Q92859 1461 aa36.88■■■■□ 3.5
LIMD2-204ENST00000578297 KIF14Q15058 1648 aa36.88■■■■□ 3.49
LIMD2-204ENST00000578297 ARAP3Q8WWN8 1544 aa36.85■■■■□ 3.49
LIMD2-204ENST00000578297 PLCH2O75038 1416 aa36.81■■■■□ 3.48
LIMD2-204ENST00000578297 VPS8Q8N3P4 1428 aa36.8■■■■□ 3.48
LIMD2-204ENST00000578297 FANCAO15360 1455 aa36.79■■■■□ 3.48
LIMD2-204ENST00000578297 CFAP74Q9C0B2 1584 aa36.77■■■■□ 3.48
LIMD2-204ENST00000578297 MYO5CQ9NQX4 1742 aa36.75■■■■□ 3.47
LIMD2-204ENST00000578297 AKNAQ7Z591 1439 aa36.73■■■■□ 3.47
LIMD2-204ENST00000578297 MTUS2Q5JR59 1369 aa36.67■■■■□ 3.46
LIMD2-204ENST00000578297 EFCAB2Q5VUJ9 269 aa36.66■■■■□ 3.46
LIMD2-204ENST00000578297 RAPGEF3O95398 923 aa36.64■■■■□ 3.46
LIMD2-204ENST00000578297 DENND4BO75064 1496 aaPredicted RBP36.61■■■■□ 3.45
LIMD2-204ENST00000578297 ARHGAP5Q13017 1502 aa36.6■■■■□ 3.45
LIMD2-204ENST00000578297 EHBP1L1Q8N3D4 1523 aa36.59■■■■□ 3.45
LIMD2-204ENST00000578297 CDC42BPBQ9Y5S2 1711 aa36.59■■■■□ 3.45
LIMD2-204ENST00000578297 PREX2Q70Z35 1606 aa36.59■■■■□ 3.45
LIMD2-204ENST00000578297 TIAM1Q13009 1591 aa36.58■■■■□ 3.45
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms