RNA–Protein interactions for RNA: ENST00000578112.5

SMARCE1-214, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 2,384 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-214ENST00000578112 KIF13AQ9H1H9 1805 aa19.9■□□□□ 0.78
SMARCE1-214ENST00000578112 JPH4Q96JJ6 628 aa19.9■□□□□ 0.78
SMARCE1-214ENST00000578112 KIAA0586Q9BVV6 1533 aa19.89■□□□□ 0.77
SMARCE1-214ENST00000578112 KIF27Q86VH2 1401 aa19.88■□□□□ 0.77
SMARCE1-214ENST00000578112 ABCC10Q5T3U5 1492 aa19.83■□□□□ 0.76
SMARCE1-214ENST00000578112 AEBP2Q6ZN18 517 aaPredicted RBP19.81■□□□□ 0.76
SMARCE1-214ENST00000578112 IGF1RP08069 1367 aa19.81■□□□□ 0.76
SMARCE1-214ENST00000578112 ADCY10Q96PN6 1610 aa19.78■□□□□ 0.76
SMARCE1-214ENST00000578112 NPM1P06748 294 aaKnown RBP eCLIP19.78■□□□□ 0.76
SMARCE1-214ENST00000578112 DIP2BQ9P265 1576 aa19.77■□□□□ 0.76
SMARCE1-214ENST00000578112 CARMIL2Q6F5E8 1435 aa19.7■□□□□ 0.74
SMARCE1-214ENST00000578112 CARMIL1Q5VZK9 1371 aa19.68■□□□□ 0.74
SMARCE1-214ENST00000578112 UHRF1BP1LA0JNW5 1464 aa19.68■□□□□ 0.74
SMARCE1-214ENST00000578112 IQGAP2Q13576 1575 aa19.67■□□□□ 0.74
SMARCE1-214ENST00000578112 TNIKQ9UKE5 1360 aa19.66■□□□□ 0.74
SMARCE1-214ENST00000578112 FAM69CQ0P6D2 419 aa19.65■□□□□ 0.74
SMARCE1-214ENST00000578112 GLI2P10070 1586 aa19.65■□□□□ 0.74
SMARCE1-214ENST00000578112 PTPRGP23470 1445 aa19.65■□□□□ 0.74
SMARCE1-214ENST00000578112 ABCC2Q92887 1545 aa19.63■□□□□ 0.73
SMARCE1-214ENST00000578112 KDM6BO15054 1643 aa19.62■□□□□ 0.73
SMARCE1-214ENST00000578112 PLB1Q6P1J6 1458 aa19.61■□□□□ 0.73
SMARCE1-214ENST00000578112 UGGT2Q9NYU1 1516 aa19.59■□□□□ 0.73
SMARCE1-214ENST00000578112 RAPGEF2Q9Y4G8 1499 aa19.55■□□□□ 0.72
SMARCE1-214ENST00000578112 UACAQ9BZF9 1416 aa19.54■□□□□ 0.72
SMARCE1-214ENST00000578112 DISP1Q96F81 1524 aa19.52■□□□□ 0.72
SMARCE1-214ENST00000578112 KDM5BQ9UGL1 1544 aa19.51■□□□□ 0.71
SMARCE1-214ENST00000578112 ASXL2Q76L83 1435 aa19.5■□□□□ 0.71
SMARCE1-214ENST00000578112 KIAA0556O60303 1618 aa19.49■□□□□ 0.71
SMARCE1-214ENST00000578112 PPRC1Q5VV67 1664 aaKnown RBP19.48■□□□□ 0.71
SMARCE1-214ENST00000578112 TSPOAP1O95153 1857 aa19.47■□□□□ 0.71
SMARCE1-214ENST00000578112 MAP3K4Q9Y6R4 1608 aa19.46■□□□□ 0.71
SMARCE1-214ENST00000578112 CTTNBP2Q8WZ74 1663 aa19.46■□□□□ 0.71
SMARCE1-214ENST00000578112 TEX14Q8IWB6 1497 aa19.45■□□□□ 0.7
SMARCE1-214ENST00000578112 GOLGA3Q08378 1498 aa19.44■□□□□ 0.7
SMARCE1-214ENST00000578112 ZCCHC11Q5TAX3 1644 aaKnown RBP19.43■□□□□ 0.7
SMARCE1-214ENST00000578112 EPRSP07814 1512 aaKnown RBP19.43■□□□□ 0.7
SMARCE1-214ENST00000578112 WDR7Q9Y4E6 1490 aa19.35■□□□□ 0.69
SMARCE1-214ENST00000578112 CFAP43Q8NDM7 1665 aa19.34■□□□□ 0.69
SMARCE1-214ENST00000578112 ABCA8O94911 1581 aa19.34■□□□□ 0.69
SMARCE1-214ENST00000578112 PRXQ9BXM0 1461 aa19.33■□□□□ 0.68
SMARCE1-214ENST00000578112 KDM4FA0A1W2PPD8 638 aa19.32■□□□□ 0.68
SMARCE1-214ENST00000578112 MAGI3Q5TCQ9 1506 aa19.31■□□□□ 0.68
SMARCE1-214ENST00000578112 FAM9AQ8IZU1 332 aaPredicted RBP19.25■□□□□ 0.67
SMARCE1-214ENST00000578112 ADGRL1O94910 1474 aa19.24■□□□□ 0.67
SMARCE1-214ENST00000578112 TTBK1Q5TCY1 1321 aaPredicted RBP19.24■□□□□ 0.67
SMARCE1-214ENST00000578112 COL17A1Q9UMD9 1497 aaPredicted RBP19.22■□□□□ 0.67
SMARCE1-214ENST00000578112 PHLDB1Q86UU1 1377 aa19.21■□□□□ 0.66
SMARCE1-214ENST00000578112 CD109Q6YHK3 1445 aa19.19■□□□□ 0.66
SMARCE1-214ENST00000578112 SAMD9Q5K651 1589 aa19.17■□□□□ 0.66
SMARCE1-214ENST00000578112 EEA1Q15075 1411 aa19.17■□□□□ 0.66
SMARCE1-214ENST00000578112 ARAP3Q8WWN8 1544 aa19.16■□□□□ 0.66
SMARCE1-214ENST00000578112 ABCA9Q8IUA7 1624 aa19.13■□□□□ 0.65
SMARCE1-214ENST00000578112 RAPGEF6Q8TEU7 1601 aa19.09■□□□□ 0.65
SMARCE1-214ENST00000578112 ATP10BO94823 1461 aa19.09■□□□□ 0.65
SMARCE1-214ENST00000578112 NEO1Q92859 1461 aa19.07■□□□□ 0.64
SMARCE1-214ENST00000578112 CSRNP3Q8WYN3 585 aa19.04■□□□□ 0.64
SMARCE1-214ENST00000578112 HECW2Q9P2P5 1572 aa19.02■□□□□ 0.63
SMARCE1-214ENST00000578112 EFCAB5A4FU69 1503 aa19.01■□□□□ 0.63
SMARCE1-214ENST00000578112 CFAP74Q9C0B2 1584 aa19■□□□□ 0.63
SMARCE1-214ENST00000578112 KCNH8Q96L42 1107 aa18.99■□□□□ 0.63
SMARCE1-214ENST00000578112 KIF21BO75037 1637 aa18.98■□□□□ 0.63
SMARCE1-214ENST00000578112 ADAMTSL3P82987 1691 aa18.95■□□□□ 0.62
SMARCE1-214ENST00000578112 NUP153P49790 1475 aaKnown RBP18.95■□□□□ 0.62
SMARCE1-214ENST00000578112 FRMPD1Q5SYB0 1578 aa18.91■□□□□ 0.62
SMARCE1-214ENST00000578112 BCORL1Q5H9F3 1711 aa18.89■□□□□ 0.61
SMARCE1-214ENST00000578112 ARHGEF40Q8TER5 1519 aa18.88■□□□□ 0.61
SMARCE1-214ENST00000578112 ZMYM4Q5VZL5 1548 aa18.87■□□□□ 0.61
SMARCE1-214ENST00000578112 FHOD3Q2V2M9 1422 aa18.87■□□□□ 0.61
SMARCE1-214ENST00000578112 RICTORQ6R327 1708 aa18.86■□□□□ 0.61
SMARCE1-214ENST00000578112 P3H3Q8IVL6 736 aa18.85■□□□□ 0.61
SMARCE1-214ENST00000578112 DENND4BO75064 1496 aaPredicted RBP18.85■□□□□ 0.61
SMARCE1-214ENST00000578112 MAGI2Q86UL8 1455 aa18.85■□□□□ 0.61
SMARCE1-214ENST00000578112 PLEKHD1A6NEE1 506 aa18.84■□□□□ 0.61
SMARCE1-214ENST00000578112 PTPRMP28827 1452 aa18.84■□□□□ 0.61
SMARCE1-214ENST00000578112 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.82■□□□□ 0.6
SMARCE1-214ENST00000578112 ILDR1Q86SU0 546 aaPredicted RBP18.81■□□□□ 0.6
SMARCE1-214ENST00000578112 AKNAQ7Z591 1439 aa18.81■□□□□ 0.6
SMARCE1-214ENST00000578112 FANCAO15360 1455 aa18.8■□□□□ 0.6
SMARCE1-214ENST00000578112 HECW1Q76N89 1606 aa18.79■□□□□ 0.6
SMARCE1-214ENST00000578112 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.79■□□□□ 0.6
SMARCE1-214ENST00000578112 HNRNPUL2Q1KMD3 747 aaKnown RBP18.79■□□□□ 0.6
SMARCE1-214ENST00000578112 POGZQ7Z3K3 1410 aa18.79■□□□□ 0.6
SMARCE1-214ENST00000578112 FMN1Q68DA7 1419 aa18.78■□□□□ 0.6
SMARCE1-214ENST00000578112 MADDQ8WXG6 1647 aa18.77■□□□□ 0.6
SMARCE1-214ENST00000578112 TTC37Q6PGP7 1564 aa18.76■□□□□ 0.59
SMARCE1-214ENST00000578112 ZFYVE16Q7Z3T8 1539 aa18.76■□□□□ 0.59
SMARCE1-214ENST00000578112 RAPGEF3O95398 923 aa18.75■□□□□ 0.59
SMARCE1-214ENST00000578112 ARID3CA6NKF2 412 aa18.75■□□□□ 0.59
SMARCE1-214ENST00000578112 PCF11O94913 1555 aaKnown RBP18.74■□□□□ 0.59
SMARCE1-214ENST00000578112 PLCH2O75038 1416 aa18.74■□□□□ 0.59
SMARCE1-214ENST00000578112 MYO5CQ9NQX4 1742 aa18.71■□□□□ 0.59
SMARCE1-214ENST00000578112 RIMS1Q86UR5 1692 aaKnown RBP18.7■□□□□ 0.58
SMARCE1-214ENST00000578112 CDK11AQ9UQ88 783 aaPredicted RBP18.69■□□□□ 0.58
SMARCE1-214ENST00000578112 KIF14Q15058 1648 aa18.67■□□□□ 0.58
SMARCE1-214ENST00000578112 CDK13Q14004 1512 aaKnown RBP18.67■□□□□ 0.58
SMARCE1-214ENST00000578112 LMTK3Q96Q04 1460 aa18.67■□□□□ 0.58
SMARCE1-214ENST00000578112 ARID4BQ4LE39 1312 aaPredicted RBP18.66■□□□□ 0.58
SMARCE1-214ENST00000578112 ARHGAP35Q9NRY4 1499 aa18.65■□□□□ 0.58
SMARCE1-214ENST00000578112 REREQ9P2R6 1566 aa18.65■□□□□ 0.58
SMARCE1-214ENST00000578112 CLIP1P30622 1438 aa18.64■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 79.6 ms