RNA–Protein interactions for RNA: ENST00000578061.5

LIMD2-202, Transcript of LIM domain containing 2, humanhuman

APPRIS P1 TSL 2 BASIC

Gene LIMD2, Length 756 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2-202ENST00000578061 JPH4Q96JJ6 628 aa35.29■■■■□ 3.24
LIMD2-202ENST00000578061 PRG4Q92954 1404 aaPredicted RBP35.25■■■■□ 3.23
LIMD2-202ENST00000578061 KIAA0586Q9BVV6 1533 aa35.17■■■■□ 3.22
LIMD2-202ENST00000578061 TRHP20396 242 aaPredicted RBP35.15■■■■□ 3.22
LIMD2-202ENST00000578061 RAPGEF2Q9Y4G8 1499 aa35.05■■■■□ 3.2
LIMD2-202ENST00000578061 IQGAP2Q13576 1575 aa34.93■■■■□ 3.18
LIMD2-202ENST00000578061 TTBK1Q5TCY1 1321 aaPredicted RBP34.87■■■■□ 3.17
LIMD2-202ENST00000578061 PRXQ9BXM0 1461 aa34.83■■■■□ 3.17
LIMD2-202ENST00000578061 CARMIL2Q6F5E8 1435 aa34.81■■■■□ 3.16
LIMD2-202ENST00000578061 PTPRGP23470 1445 aa34.78■■■■□ 3.16
LIMD2-202ENST00000578061 CSRNP3Q8WYN3 585 aa34.77■■■■□ 3.16
LIMD2-202ENST00000578061 TNIKQ9UKE5 1360 aa34.74■■■■□ 3.15
LIMD2-202ENST00000578061 DISP1Q96F81 1524 aa34.74■■■■□ 3.15
LIMD2-202ENST00000578061 ADCY10Q96PN6 1610 aa34.73■■■■□ 3.15
LIMD2-202ENST00000578061 FAM9AQ8IZU1 332 aaPredicted RBP34.72■■■■□ 3.15
LIMD2-202ENST00000578061 UGGT2Q9NYU1 1516 aa34.71■■■■□ 3.15
LIMD2-202ENST00000578061 NPM1P06748 294 aaKnown RBP eCLIP34.71■■■■□ 3.15
LIMD2-202ENST00000578061 CHIC1Q5VXU3 224 aa34.71■■■■□ 3.15
LIMD2-202ENST00000578061 CTTNBP2Q8WZ74 1663 aa34.69■■■■□ 3.14
LIMD2-202ENST00000578061 EEA1Q15075 1411 aa34.64■■■■□ 3.14
LIMD2-202ENST00000578061 KIAA0556O60303 1618 aa34.61■■■■□ 3.13
LIMD2-202ENST00000578061 MAPKBP1O60336 1514 aa34.53■■■■□ 3.12
LIMD2-202ENST00000578061 UACAQ9BZF9 1416 aa34.52■■■■□ 3.12
LIMD2-202ENST00000578061 GOLGA3Q08378 1498 aa34.49■■■■□ 3.11
LIMD2-202ENST00000578061 FAM69CQ0P6D2 419 aa34.48■■■■□ 3.11
LIMD2-202ENST00000578061 ABCC2Q92887 1545 aa34.48■■■■□ 3.11
LIMD2-202ENST00000578061 KIF13AQ9H1H9 1805 aa34.48■■■■□ 3.11
LIMD2-202ENST00000578061 UHRF1BP1LA0JNW5 1464 aa34.46■■■■□ 3.11
LIMD2-202ENST00000578061 ABCC10Q5T3U5 1492 aa34.46■■■■□ 3.11
LIMD2-202ENST00000578061 P3H3Q8IVL6 736 aa34.41■■■■□ 3.1
LIMD2-202ENST00000578061 DIP2BQ9P265 1576 aa34.39■■■■□ 3.1
LIMD2-202ENST00000578061 RANGAP1P46060 587 aaPredicted RBP34.38■■■■□ 3.09
LIMD2-202ENST00000578061 EHMT2Q96KQ7 1210 aa34.38■■■■□ 3.09
LIMD2-202ENST00000578061 PLB1Q6P1J6 1458 aa34.36■■■■□ 3.09
LIMD2-202ENST00000578061 KIF21BO75037 1637 aa34.33■■■■□ 3.09
LIMD2-202ENST00000578061 ASXL2Q76L83 1435 aa34.33■■■■□ 3.09
LIMD2-202ENST00000578061 KDM5BQ9UGL1 1544 aa34.3■■■■□ 3.08
LIMD2-202ENST00000578061 ZCCHC11Q5TAX3 1644 aaKnown RBP34.26■■■■□ 3.07
LIMD2-202ENST00000578061 ABCA8O94911 1581 aa34.25■■■■□ 3.07
LIMD2-202ENST00000578061 SAMD9Q5K651 1589 aa34.24■■■■□ 3.07
LIMD2-202ENST00000578061 UBTFP17480 764 aaKnown RBP34.18■■■■□ 3.06
LIMD2-202ENST00000578061 ARID3CA6NKF2 412 aa34.17■■■■□ 3.06
LIMD2-202ENST00000578061 TSPOAP1O95153 1857 aa34.15■■■■□ 3.06
LIMD2-202ENST00000578061 FHOD3Q2V2M9 1422 aa34.13■■■■□ 3.05
LIMD2-202ENST00000578061 EPRSP07814 1512 aaKnown RBP34.11■■■■□ 3.05
LIMD2-202ENST00000578061 GLI2P10070 1586 aa34.09■■■■□ 3.05
LIMD2-202ENST00000578061 WDR7Q9Y4E6 1490 aa34.07■■■■□ 3.05
LIMD2-202ENST00000578061 KCNH8Q96L42 1107 aa34.02■■■■□ 3.04
LIMD2-202ENST00000578061 EFCAB5A4FU69 1503 aa34.01■■■■□ 3.04
LIMD2-202ENST00000578061 RAPGEF6Q8TEU7 1601 aa34.01■■■■□ 3.03
LIMD2-202ENST00000578061 ATP10BO94823 1461 aa34■■■■□ 3.03
LIMD2-202ENST00000578061 PPRC1Q5VV67 1664 aaKnown RBP33.96■■■■□ 3.03
LIMD2-202ENST00000578061 KDM6BO15054 1643 aa33.94■■■■□ 3.02
LIMD2-202ENST00000578061 MAP3K4Q9Y6R4 1608 aa33.94■■■■□ 3.02
LIMD2-202ENST00000578061 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP33.93■■■■□ 3.02
LIMD2-202ENST00000578061 HNRNPUL2Q1KMD3 747 aaKnown RBP33.93■■■■□ 3.02
LIMD2-202ENST00000578061 NUP153P49790 1475 aaKnown RBP33.91■■■■□ 3.02
LIMD2-202ENST00000578061 ARHGAP35Q9NRY4 1499 aa33.86■■■■□ 3.01
LIMD2-202ENST00000578061 CD109Q6YHK3 1445 aa33.82■■■■□ 3
LIMD2-202ENST00000578061 TEX14Q8IWB6 1497 aa33.81■■■■□ 3
LIMD2-202ENST00000578061 CFAP43Q8NDM7 1665 aa33.76■■■□□ 2.99
LIMD2-202ENST00000578061 ATP1B4Q9UN42 357 aaPredicted RBP33.75■■■□□ 2.99
LIMD2-202ENST00000578061 COL17A1Q9UMD9 1497 aaPredicted RBP33.75■■■□□ 2.99
LIMD2-202ENST00000578061 FMN1Q68DA7 1419 aa33.72■■■□□ 2.99
LIMD2-202ENST00000578061 MAGI3Q5TCQ9 1506 aa33.72■■■□□ 2.99
LIMD2-202ENST00000578061 PLEKHD1A6NEE1 506 aa33.69■■■□□ 2.98
LIMD2-202ENST00000578061 CDK13Q14004 1512 aaKnown RBP33.68■■■□□ 2.98
LIMD2-202ENST00000578061 ABCA9Q8IUA7 1624 aa33.64■■■□□ 2.98
LIMD2-202ENST00000578061 AEBP2Q6ZN18 517 aaPredicted RBP33.61■■■□□ 2.97
LIMD2-202ENST00000578061 HECW1Q76N89 1606 aa33.6■■■□□ 2.97
LIMD2-202ENST00000578061 CLIP1P30622 1438 aa33.56■■■□□ 2.96
LIMD2-202ENST00000578061 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP33.48■■■□□ 2.95
LIMD2-202ENST00000578061 PCF11O94913 1555 aaKnown RBP33.46■■■□□ 2.95
LIMD2-202ENST00000578061 CASKIN1Q8WXD9 1431 aa33.45■■■□□ 2.94
LIMD2-202ENST00000578061 TTC37Q6PGP7 1564 aa33.44■■■□□ 2.94
LIMD2-202ENST00000578061 CDK11AQ9UQ88 783 aaPredicted RBP33.44■■■□□ 2.94
LIMD2-202ENST00000578061 ARAP3Q8WWN8 1544 aa33.43■■■□□ 2.94
LIMD2-202ENST00000578061 LRRIQ1Q96JM4 1722 aa33.43■■■□□ 2.94
LIMD2-202ENST00000578061 NEO1Q92859 1461 aa33.41■■■□□ 2.94
LIMD2-202ENST00000578061 PHLDB1Q86UU1 1377 aa33.4■■■□□ 2.94
LIMD2-202ENST00000578061 KDM4FA0A1W2PPD8 638 aa33.39■■■□□ 2.94
LIMD2-202ENST00000578061 RAPGEF3O95398 923 aa33.37■■■□□ 2.93
LIMD2-202ENST00000578061 LOC105371045A0A1W2PR82 267 aa33.36■■■□□ 2.93
LIMD2-202ENST00000578061 TROQ12816 1431 aaPredicted RBP33.34■■■□□ 2.93
LIMD2-202ENST00000578061 FANCAO15360 1455 aa33.33■■■□□ 2.93
LIMD2-202ENST00000578061 CEP162Q5TB80 1403 aa33.33■■■□□ 2.93
LIMD2-202ENST00000578061 FYCO1Q9BQS8 1478 aa33.32■■■□□ 2.92
LIMD2-202ENST00000578061 KIF14Q15058 1648 aa33.32■■■□□ 2.92
LIMD2-202ENST00000578061 CCDC18Q5T9S5 1454 aa33.31■■■□□ 2.92
LIMD2-202ENST00000578061 AKNAQ7Z591 1439 aa33.3■■■□□ 2.92
LIMD2-202ENST00000578061 PLCH2O75038 1416 aa33.27■■■□□ 2.92
LIMD2-202ENST00000578061 ADGRL1O94910 1474 aa33.25■■■□□ 2.91
LIMD2-202ENST00000578061 FRMPD1Q5SYB0 1578 aa33.23■■■□□ 2.91
LIMD2-202ENST00000578061 CFAP74Q9C0B2 1584 aa33.23■■■□□ 2.91
LIMD2-202ENST00000578061 DENND4BO75064 1496 aaPredicted RBP33.22■■■□□ 2.91
LIMD2-202ENST00000578061 MYO5CQ9NQX4 1742 aa33.19■■■□□ 2.9
LIMD2-202ENST00000578061 EFCAB2Q5VUJ9 269 aa33.17■■■□□ 2.9
LIMD2-202ENST00000578061 SCAPERQ9BY12 1400 aa33.13■■■□□ 2.89
LIMD2-202ENST00000578061 ARHGAP5Q13017 1502 aa33.12■■■□□ 2.89
LIMD2-202ENST00000578061 RICTORQ6R327 1708 aa33.12■■■□□ 2.89
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms