RNA–Protein interactions for RNA: ENST00000577990.1

SMARCD2-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 3

Gene SMARCD2, Length 449 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-206ENST00000577990 CARMIL1Q5VZK9 1371 aa37.54■■■■□ 3.6
SMARCD2-206ENST00000577990 PRG4Q92954 1404 aaPredicted RBP37.36■■■■□ 3.57
SMARCD2-206ENST00000577990 CHIC1Q5VXU3 224 aa37.34■■■■□ 3.57
SMARCD2-206ENST00000577990 RAPGEF2Q9Y4G8 1499 aa37.33■■■■□ 3.57
SMARCD2-206ENST00000577990 JPH4Q96JJ6 628 aa37.31■■■■□ 3.56
SMARCD2-206ENST00000577990 KIAA0586Q9BVV6 1533 aa37.31■■■■□ 3.56
SMARCD2-206ENST00000577990 EEA1Q15075 1411 aa37.2■■■■□ 3.55
SMARCD2-206ENST00000577990 PRXQ9BXM0 1461 aa37.19■■■■□ 3.54
SMARCD2-206ENST00000577990 CSRNP3Q8WYN3 585 aa37.13■■■■□ 3.53
SMARCD2-206ENST00000577990 IQGAP2Q13576 1575 aa37.11■■■■□ 3.53
SMARCD2-206ENST00000577990 FAM9AQ8IZU1 332 aaPredicted RBP37■■■■□ 3.51
SMARCD2-206ENST00000577990 CTTNBP2Q8WZ74 1663 aa36.99■■■■□ 3.51
SMARCD2-206ENST00000577990 ADCY10Q96PN6 1610 aa36.96■■■■□ 3.51
SMARCD2-206ENST00000577990 KIF13AQ9H1H9 1805 aa36.94■■■■□ 3.5
SMARCD2-206ENST00000577990 CARMIL2Q6F5E8 1435 aa36.91■■■■□ 3.5
SMARCD2-206ENST00000577990 UGGT2Q9NYU1 1516 aa36.9■■■■□ 3.5
SMARCD2-206ENST00000577990 DISP1Q96F81 1524 aa36.84■■■■□ 3.49
SMARCD2-206ENST00000577990 TTBK1Q5TCY1 1321 aaPredicted RBP36.83■■■■□ 3.49
SMARCD2-206ENST00000577990 KIF21BO75037 1637 aa36.82■■■■□ 3.49
SMARCD2-206ENST00000577990 TNIKQ9UKE5 1360 aa36.79■■■■□ 3.48
SMARCD2-206ENST00000577990 PTPRGP23470 1445 aa36.78■■■■□ 3.48
SMARCD2-206ENST00000577990 NPM1P06748 294 aaKnown RBP eCLIP36.78■■■■□ 3.48
SMARCD2-206ENST00000577990 MAPKBP1O60336 1514 aa36.77■■■■□ 3.48
SMARCD2-206ENST00000577990 KIAA0556O60303 1618 aa36.76■■■■□ 3.48
SMARCD2-206ENST00000577990 GOLGA3Q08378 1498 aa36.69■■■■□ 3.46
SMARCD2-206ENST00000577990 ABCC10Q5T3U5 1492 aa36.69■■■■□ 3.46
SMARCD2-206ENST00000577990 DIP2BQ9P265 1576 aa36.68■■■■□ 3.46
SMARCD2-206ENST00000577990 FAM69CQ0P6D2 419 aa36.63■■■■□ 3.45
SMARCD2-206ENST00000577990 ABCC2Q92887 1545 aa36.58■■■■□ 3.45
SMARCD2-206ENST00000577990 UACAQ9BZF9 1416 aa36.52■■■■□ 3.44
SMARCD2-206ENST00000577990 TSPOAP1O95153 1857 aa36.52■■■■□ 3.44
SMARCD2-206ENST00000577990 UHRF1BP1LA0JNW5 1464 aa36.51■■■■□ 3.44
SMARCD2-206ENST00000577990 EHMT2Q96KQ7 1210 aa36.51■■■■□ 3.44
SMARCD2-206ENST00000577990 SAMD9Q5K651 1589 aa36.51■■■■□ 3.44
SMARCD2-206ENST00000577990 UBTFP17480 764 aaKnown RBP36.48■■■■□ 3.43
SMARCD2-206ENST00000577990 ASXL2Q76L83 1435 aa36.42■■■■□ 3.42
SMARCD2-206ENST00000577990 P3H3Q8IVL6 736 aa36.42■■■■□ 3.42
SMARCD2-206ENST00000577990 RANGAP1P46060 587 aaPredicted RBP36.41■■■■□ 3.42
SMARCD2-206ENST00000577990 ZCCHC11Q5TAX3 1644 aaKnown RBP36.4■■■■□ 3.42
SMARCD2-206ENST00000577990 PLB1Q6P1J6 1458 aa36.37■■■■□ 3.41
SMARCD2-206ENST00000577990 KDM5BQ9UGL1 1544 aa36.37■■■■□ 3.41
SMARCD2-206ENST00000577990 ABCA8O94911 1581 aa36.36■■■■□ 3.41
SMARCD2-206ENST00000577990 EFCAB5A4FU69 1503 aa36.35■■■■□ 3.41
SMARCD2-206ENST00000577990 FHOD3Q2V2M9 1422 aa36.29■■■■□ 3.4
SMARCD2-206ENST00000577990 GLI2P10070 1586 aa36.27■■■■□ 3.4
SMARCD2-206ENST00000577990 KDM6BO15054 1643 aa36.27■■■■□ 3.4
SMARCD2-206ENST00000577990 PPRC1Q5VV67 1664 aaKnown RBP36.26■■■■□ 3.39
SMARCD2-206ENST00000577990 EPRSP07814 1512 aaKnown RBP36.21■■■■□ 3.39
SMARCD2-206ENST00000577990 RAPGEF6Q8TEU7 1601 aa36.16■■■■□ 3.38
SMARCD2-206ENST00000577990 MAP3K4Q9Y6R4 1608 aa36.16■■■■□ 3.38
SMARCD2-206ENST00000577990 ARHGAP35Q9NRY4 1499 aa36.15■■■■□ 3.38
SMARCD2-206ENST00000577990 AEBP2Q6ZN18 517 aaPredicted RBP36.13■■■■□ 3.37
SMARCD2-206ENST00000577990 WDR7Q9Y4E6 1490 aa36.12■■■■□ 3.37
SMARCD2-206ENST00000577990 ATP10BO94823 1461 aa36.04■■■■□ 3.36
SMARCD2-206ENST00000577990 ARID3CA6NKF2 412 aa36.02■■■■□ 3.36
SMARCD2-206ENST00000577990 NUP153P49790 1475 aaKnown RBP36.02■■■■□ 3.36
SMARCD2-206ENST00000577990 FMN1Q68DA7 1419 aa36■■■■□ 3.35
SMARCD2-206ENST00000577990 KCNH8Q96L42 1107 aa35.95■■■■□ 3.35
SMARCD2-206ENST00000577990 TEX14Q8IWB6 1497 aa35.94■■■■□ 3.34
SMARCD2-206ENST00000577990 CFAP43Q8NDM7 1665 aa35.94■■■■□ 3.34
SMARCD2-206ENST00000577990 CLIP1P30622 1438 aa35.93■■■■□ 3.34
SMARCD2-206ENST00000577990 COL17A1Q9UMD9 1497 aaPredicted RBP35.91■■■■□ 3.34
SMARCD2-206ENST00000577990 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP35.87■■■■□ 3.33
SMARCD2-206ENST00000577990 HNRNPUL2Q1KMD3 747 aaKnown RBP35.87■■■■□ 3.33
SMARCD2-206ENST00000577990 HECW1Q76N89 1606 aa35.85■■■■□ 3.33
SMARCD2-206ENST00000577990 CD109Q6YHK3 1445 aa35.84■■■■□ 3.33
SMARCD2-206ENST00000577990 MAGI3Q5TCQ9 1506 aa35.79■■■■□ 3.32
SMARCD2-206ENST00000577990 LOC105371045A0A1W2PR82 267 aa35.79■■■■□ 3.32
SMARCD2-206ENST00000577990 CDK13Q14004 1512 aaKnown RBP35.78■■■■□ 3.32
SMARCD2-206ENST00000577990 CEP162Q5TB80 1403 aa35.77■■■■□ 3.32
SMARCD2-206ENST00000577990 ATP1B4Q9UN42 357 aaPredicted RBP35.77■■■■□ 3.32
SMARCD2-206ENST00000577990 PCF11O94913 1555 aaKnown RBP35.73■■■■□ 3.31
SMARCD2-206ENST00000577990 CASKIN1Q8WXD9 1431 aa35.72■■■■□ 3.31
SMARCD2-206ENST00000577990 ABCA9Q8IUA7 1624 aa35.72■■■■□ 3.31
SMARCD2-206ENST00000577990 PLEKHD1A6NEE1 506 aa35.71■■■■□ 3.31
SMARCD2-206ENST00000577990 KDM4FA0A1W2PPD8 638 aa35.7■■■■□ 3.31
SMARCD2-206ENST00000577990 LRRIQ1Q96JM4 1722 aa35.65■■■■□ 3.3
SMARCD2-206ENST00000577990 FYCO1Q9BQS8 1478 aa35.65■■■■□ 3.3
SMARCD2-206ENST00000577990 CCDC18Q5T9S5 1454 aa35.6■■■■□ 3.29
SMARCD2-206ENST00000577990 CDK11AQ9UQ88 783 aaPredicted RBP35.57■■■■□ 3.28
SMARCD2-206ENST00000577990 ADGRL1O94910 1474 aa35.55■■■■□ 3.28
SMARCD2-206ENST00000577990 ARAP3Q8WWN8 1544 aa35.51■■■■□ 3.27
SMARCD2-206ENST00000577990 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP35.5■■■■□ 3.27
SMARCD2-206ENST00000577990 TROQ12816 1431 aaPredicted RBP35.49■■■■□ 3.27
SMARCD2-206ENST00000577990 TTC37Q6PGP7 1564 aa35.47■■■■□ 3.27
SMARCD2-206ENST00000577990 KIF14Q15058 1648 aa35.43■■■■□ 3.26
SMARCD2-206ENST00000577990 NEO1Q92859 1461 aa35.42■■■■□ 3.26
SMARCD2-206ENST00000577990 PHLDB1Q86UU1 1377 aa35.38■■■■□ 3.25
SMARCD2-206ENST00000577990 FRMPD1Q5SYB0 1578 aa35.35■■■■□ 3.25
SMARCD2-206ENST00000577990 VPS8Q8N3P4 1428 aa35.34■■■■□ 3.25
SMARCD2-206ENST00000577990 RAPGEF3O95398 923 aa35.34■■■■□ 3.25
SMARCD2-206ENST00000577990 CFAP74Q9C0B2 1584 aa35.3■■■■□ 3.24
SMARCD2-206ENST00000577990 PLCH2O75038 1416 aa35.29■■■■□ 3.24
SMARCD2-206ENST00000577990 MYO5CQ9NQX4 1742 aa35.29■■■■□ 3.24
SMARCD2-206ENST00000577990 FANCAO15360 1455 aa35.29■■■■□ 3.24
SMARCD2-206ENST00000577990 RICTORQ6R327 1708 aa35.25■■■■□ 3.23
SMARCD2-206ENST00000577990 AKNAQ7Z591 1439 aa35.23■■■■□ 3.23
SMARCD2-206ENST00000577990 MTUS2Q5JR59 1369 aa35.21■■■■□ 3.23
SMARCD2-206ENST00000577990 DENND4BO75064 1496 aaPredicted RBP35.18■■■■□ 3.22
SMARCD2-206ENST00000577990 EHBP1L1Q8N3D4 1523 aa35.16■■■■□ 3.22
Retrieved 100 of 20,778 RNA–protein pairs in 75.7 ms