RNA–Protein interactions for RNA: ENST00000577901.5

VAPA-204, Transcript of VAMP associated protein A, humanhuman

TSL 2

Gene VAPA, Length 917 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-204ENST00000577901 RUSC2Q8N2Y8 1516 aa28■■■□□ 2.07
VAPA-204ENST00000577901 IGF1RP08069 1367 aa27.89■■■□□ 2.06
VAPA-204ENST00000577901 KIF27Q86VH2 1401 aa27.89■■■□□ 2.06
VAPA-204ENST00000577901 KIF13AQ9H1H9 1805 aa27.88■■■□□ 2.05
VAPA-204ENST00000577901 KIAA0586Q9BVV6 1533 aa27.85■■■□□ 2.05
VAPA-204ENST00000577901 NPM1P06748 294 aaKnown RBP eCLIP27.84■■■□□ 2.05
VAPA-204ENST00000577901 CUL7Q14999 1698 aa27.83■■■□□ 2.05
VAPA-204ENST00000577901 ABCC10Q5T3U5 1492 aa27.78■■■□□ 2.04
VAPA-204ENST00000577901 FAM69CQ0P6D2 419 aa27.78■■■□□ 2.04
VAPA-204ENST00000577901 ADCY10Q96PN6 1610 aa27.78■■■□□ 2.04
VAPA-204ENST00000577901 MAPKBP1O60336 1514 aa27.77■■■□□ 2.04
VAPA-204ENST00000577901 CARMIL1Q5VZK9 1371 aa27.71■■■□□ 2.03
VAPA-204ENST00000577901 DIP2BQ9P265 1576 aa27.69■■■□□ 2.02
VAPA-204ENST00000577901 PTPRGP23470 1445 aa27.64■■■□□ 2.02
VAPA-204ENST00000577901 TTBK1Q5TCY1 1321 aaPredicted RBP27.6■■■□□ 2.01
VAPA-204ENST00000577901 CARMIL2Q6F5E8 1435 aa27.59■■■□□ 2.01
VAPA-204ENST00000577901 TNIKQ9UKE5 1360 aa27.58■■■□□ 2.01
VAPA-204ENST00000577901 IQGAP2Q13576 1575 aa27.55■■■□□ 2
VAPA-204ENST00000577901 ABCC2Q92887 1545 aa27.5■■□□□ 1.99
VAPA-204ENST00000577901 KDM6BO15054 1643 aa27.49■■□□□ 1.99
VAPA-204ENST00000577901 TSPOAP1O95153 1857 aa27.47■■□□□ 1.99
VAPA-204ENST00000577901 DISP1Q96F81 1524 aa27.44■■□□□ 1.98
VAPA-204ENST00000577901 UHRF1BP1LA0JNW5 1464 aa27.43■■□□□ 1.98
VAPA-204ENST00000577901 RAPGEF2Q9Y4G8 1499 aa27.43■■□□□ 1.98
VAPA-204ENST00000577901 ASXL2Q76L83 1435 aa27.42■■□□□ 1.98
VAPA-204ENST00000577901 UACAQ9BZF9 1416 aa27.41■■□□□ 1.98
VAPA-204ENST00000577901 PLB1Q6P1J6 1458 aa27.41■■□□□ 1.98
VAPA-204ENST00000577901 UGGT2Q9NYU1 1516 aa27.37■■□□□ 1.97
VAPA-204ENST00000577901 GLI2P10070 1586 aa27.36■■□□□ 1.97
VAPA-204ENST00000577901 KDM4FA0A1W2PPD8 638 aa27.32■■□□□ 1.96
VAPA-204ENST00000577901 KDM5BQ9UGL1 1544 aa27.31■■□□□ 1.96
VAPA-204ENST00000577901 KIAA0556O60303 1618 aa27.3■■□□□ 1.96
VAPA-204ENST00000577901 PPRC1Q5VV67 1664 aaKnown RBP27.29■■□□□ 1.96
VAPA-204ENST00000577901 EPRSP07814 1512 aaKnown RBP27.26■■□□□ 1.95
VAPA-204ENST00000577901 ZCCHC11Q5TAX3 1644 aaKnown RBP27.24■■□□□ 1.95
VAPA-204ENST00000577901 MAP3K4Q9Y6R4 1608 aa27.19■■□□□ 1.94
VAPA-204ENST00000577901 CTTNBP2Q8WZ74 1663 aa27.18■■□□□ 1.94
VAPA-204ENST00000577901 GOLGA3Q08378 1498 aa27.15■■□□□ 1.94
VAPA-204ENST00000577901 TEX14Q8IWB6 1497 aa27.15■■□□□ 1.94
VAPA-204ENST00000577901 COL17A1Q9UMD9 1497 aaPredicted RBP27.14■■□□□ 1.94
VAPA-204ENST00000577901 WDR7Q9Y4E6 1490 aa27.13■■□□□ 1.93
VAPA-204ENST00000577901 PRXQ9BXM0 1461 aa27.11■■□□□ 1.93
VAPA-204ENST00000577901 ABCA8O94911 1581 aa27.07■■□□□ 1.92
VAPA-204ENST00000577901 ADGRL1O94910 1474 aa27.06■■□□□ 1.92
VAPA-204ENST00000577901 KCNH8Q96L42 1107 aa27■■□□□ 1.91
VAPA-204ENST00000577901 CD109Q6YHK3 1445 aa26.99■■□□□ 1.91
VAPA-204ENST00000577901 MAGI3Q5TCQ9 1506 aa26.97■■□□□ 1.91
VAPA-204ENST00000577901 CFAP43Q8NDM7 1665 aa26.95■■□□□ 1.91
VAPA-204ENST00000577901 FAM9AQ8IZU1 332 aaPredicted RBP26.93■■□□□ 1.9
VAPA-204ENST00000577901 P3H3Q8IVL6 736 aa26.92■■□□□ 1.9
VAPA-204ENST00000577901 ARID3CA6NKF2 412 aa26.88■■□□□ 1.89
VAPA-204ENST00000577901 CSRNP3Q8WYN3 585 aa26.87■■□□□ 1.89
VAPA-204ENST00000577901 ATP10BO94823 1461 aa26.86■■□□□ 1.89
VAPA-204ENST00000577901 SENP3Q9H4L4 574 aaPredicted RBP26.82■■□□□ 1.88
VAPA-204ENST00000577901 SAMD9Q5K651 1589 aa26.81■■□□□ 1.88
VAPA-204ENST00000577901 ARAP3Q8WWN8 1544 aa26.76■■□□□ 1.87
VAPA-204ENST00000577901 RAPGEF6Q8TEU7 1601 aa26.74■■□□□ 1.87
VAPA-204ENST00000577901 ABCA9Q8IUA7 1624 aa26.73■■□□□ 1.87
VAPA-204ENST00000577901 HECW2Q9P2P5 1572 aa26.72■■□□□ 1.87
VAPA-204ENST00000577901 EEA1Q15075 1411 aa26.72■■□□□ 1.87
VAPA-204ENST00000577901 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.7■■□□□ 1.86
VAPA-204ENST00000577901 HNRNPUL2Q1KMD3 747 aaKnown RBP26.7■■□□□ 1.86
VAPA-204ENST00000577901 PHLDB1Q86UU1 1377 aa26.7■■□□□ 1.86
VAPA-204ENST00000577901 KIF21BO75037 1637 aa26.69■■□□□ 1.86
VAPA-204ENST00000577901 RANGAP1P46060 587 aaPredicted RBP26.68■■□□□ 1.86
VAPA-204ENST00000577901 ILDR1Q86SU0 546 aaPredicted RBP26.65■■□□□ 1.86
VAPA-204ENST00000577901 NUP153P49790 1475 aaKnown RBP26.65■■□□□ 1.86
VAPA-204ENST00000577901 FHOD3Q2V2M9 1422 aa26.64■■□□□ 1.85
VAPA-204ENST00000577901 NEO1Q92859 1461 aa26.62■■□□□ 1.85
VAPA-204ENST00000577901 RAPGEF3O95398 923 aa26.61■■□□□ 1.85
VAPA-204ENST00000577901 PLEKHD1A6NEE1 506 aa26.54■■□□□ 1.84
VAPA-204ENST00000577901 EFCAB5A4FU69 1503 aa26.52■■□□□ 1.84
VAPA-204ENST00000577901 FRMPD1Q5SYB0 1578 aa26.52■■□□□ 1.84
VAPA-204ENST00000577901 ADAMTSL3P82987 1691 aa26.49■■□□□ 1.83
VAPA-204ENST00000577901 PTPRMP28827 1452 aa26.47■■□□□ 1.83
VAPA-204ENST00000577901 ARID4BQ4LE39 1312 aaPredicted RBP26.45■■□□□ 1.83
VAPA-204ENST00000577901 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP26.44■■□□□ 1.822e-8■■■■□ 23.9
VAPA-204ENST00000577901 DENND4BO75064 1496 aaPredicted RBP26.44■■□□□ 1.82
VAPA-204ENST00000577901 AKNAQ7Z591 1439 aa26.44■■□□□ 1.82
VAPA-204ENST00000577901 FANCAO15360 1455 aa26.43■■□□□ 1.82
VAPA-204ENST00000577901 BCORL1Q5H9F3 1711 aa26.42■■□□□ 1.82
VAPA-204ENST00000577901 CFAP74Q9C0B2 1584 aa26.41■■□□□ 1.82
VAPA-204ENST00000577901 ARHGEF40Q8TER5 1519 aa26.39■■□□□ 1.82
VAPA-204ENST00000577901 RICTORQ6R327 1708 aa26.39■■□□□ 1.82
VAPA-204ENST00000577901 TTC37Q6PGP7 1564 aa26.39■■□□□ 1.82
VAPA-204ENST00000577901 CDK13Q14004 1512 aaKnown RBP26.38■■□□□ 1.81
VAPA-204ENST00000577901 MADDQ8WXG6 1647 aa26.37■■□□□ 1.81
VAPA-204ENST00000577901 UBTFP17480 764 aaKnown RBP26.35■■□□□ 1.81
VAPA-204ENST00000577901 EHMT2Q96KQ7 1210 aa26.35■■□□□ 1.81
VAPA-204ENST00000577901 PHF23Q9BUL5 403 aaPredicted RBP26.34■■□□□ 1.81
VAPA-204ENST00000577901 ZMYM4Q5VZL5 1548 aa26.31■■□□□ 1.8
VAPA-204ENST00000577901 ATP1B4Q9UN42 357 aaPredicted RBP26.3■■□□□ 1.8
VAPA-204ENST00000577901 FMN1Q68DA7 1419 aa26.29■■□□□ 1.8
VAPA-204ENST00000577901 PLCH2O75038 1416 aa26.28■■□□□ 1.8
VAPA-204ENST00000577901 ZFYVE16Q7Z3T8 1539 aa26.28■■□□□ 1.8
VAPA-204ENST00000577901 YEATS2Q9ULM3 1422 aa26.27■■□□□ 1.8
VAPA-204ENST00000577901 RIMS1Q86UR5 1692 aaKnown RBP26.26■■□□□ 1.79
VAPA-204ENST00000577901 HECW1Q76N89 1606 aa26.26■■□□□ 1.79
VAPA-204ENST00000577901 MAGI2Q86UL8 1455 aa26.26■■□□□ 1.79
VAPA-204ENST00000577901 ARHGAP35Q9NRY4 1499 aa26.26■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms