RNA–Protein interactions for RNA: ENST00000577779.1

PPP4R1-206, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 2

Gene PPP4R1, Length 481 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-206ENST00000577779 NPM1P06748 294 aaKnown RBP eCLIP25.87■■□□□ 1.73
PPP4R1-206ENST00000577779 JPH4Q96JJ6 628 aa25.84■■□□□ 1.73
PPP4R1-206ENST00000577779 DIP2BQ9P265 1576 aa25.84■■□□□ 1.73
PPP4R1-206ENST00000577779 MAPKBP1O60336 1514 aa25.83■■□□□ 1.73
PPP4R1-206ENST00000577779 KDM6BO15054 1643 aa25.83■■□□□ 1.73
PPP4R1-206ENST00000577779 ERICH3Q5RHP9 1530 aa25.82■■□□□ 1.72
PPP4R1-206ENST00000577779 TOP2BQ02880 1626 aa25.74■■□□□ 1.71
PPP4R1-206ENST00000577779 ADCY10Q96PN6 1610 aa25.74■■□□□ 1.71
PPP4R1-206ENST00000577779 BIVM-ERCC5R4GMW8 1640 aa25.74■■□□□ 1.71
PPP4R1-206ENST00000577779 TSPOAP1O95153 1857 aa25.73■■□□□ 1.71
PPP4R1-206ENST00000577779 RUSC2Q8N2Y8 1516 aa25.71■■□□□ 1.71
PPP4R1-206ENST00000577779 ADGRL1O94910 1474 aa25.53■■□□□ 1.68
PPP4R1-206ENST00000577779 KIAA0586Q9BVV6 1533 aa25.49■■□□□ 1.67
PPP4R1-206ENST00000577779 SUPT5HO00267 1087 aaKnown RBP25.43■■□□□ 1.66
PPP4R1-206ENST00000577779 PTPRGP23470 1445 aa25.43■■□□□ 1.66
PPP4R1-206ENST00000577779 HECW2Q9P2P5 1572 aa25.43■■□□□ 1.66
PPP4R1-206ENST00000577779 PPRC1Q5VV67 1664 aaKnown RBP25.42■■□□□ 1.66
PPP4R1-206ENST00000577779 TTBK1Q5TCY1 1321 aaPredicted RBP25.4■■□□□ 1.66
PPP4R1-206ENST00000577779 GLI2P10070 1586 aa25.39■■□□□ 1.65
PPP4R1-206ENST00000577779 ASXL2Q76L83 1435 aa25.38■■□□□ 1.65
PPP4R1-206ENST00000577779 ABCC2Q92887 1545 aa25.38■■□□□ 1.65
PPP4R1-206ENST00000577779 PLB1Q6P1J6 1458 aa25.37■■□□□ 1.65
PPP4R1-206ENST00000577779 COL17A1Q9UMD9 1497 aaPredicted RBP25.31■■□□□ 1.64
PPP4R1-206ENST00000577779 IGF1RP08069 1367 aa25.31■■□□□ 1.64
PPP4R1-206ENST00000577779 TNIKQ9UKE5 1360 aa25.31■■□□□ 1.64
PPP4R1-206ENST00000577779 CUL7Q14999 1698 aa25.3■■□□□ 1.64
PPP4R1-206ENST00000577779 CARMIL2Q6F5E8 1435 aa25.29■■□□□ 1.64
PPP4R1-206ENST00000577779 UHRF1BP1LA0JNW5 1464 aa25.23■■□□□ 1.63
PPP4R1-206ENST00000577779 TEX14Q8IWB6 1497 aa25.23■■□□□ 1.63
PPP4R1-206ENST00000577779 MAP3K4Q9Y6R4 1608 aa25.23■■□□□ 1.63
PPP4R1-206ENST00000577779 KIF27Q86VH2 1401 aa25.22■■□□□ 1.63
PPP4R1-206ENST00000577779 EPRSP07814 1512 aaKnown RBP25.22■■□□□ 1.63
PPP4R1-206ENST00000577779 UACAQ9BZF9 1416 aa25.2■■□□□ 1.62
PPP4R1-206ENST00000577779 IQGAP2Q13576 1575 aa25.14■■□□□ 1.62
PPP4R1-206ENST00000577779 FBXO41Q8TF61 875 aa25.14■■□□□ 1.62
PPP4R1-206ENST00000577779 KDM5BQ9UGL1 1544 aa25.13■■□□□ 1.61
PPP4R1-206ENST00000577779 CARMIL1Q5VZK9 1371 aa25.13■■□□□ 1.61
PPP4R1-206ENST00000577779 ZCCHC11Q5TAX3 1644 aaKnown RBP25.09■■□□□ 1.61
PPP4R1-206ENST00000577779 DISP1Q96F81 1524 aa25.07■■□□□ 1.6
PPP4R1-206ENST00000577779 WDR7Q9Y4E6 1490 aa25.01■■□□□ 1.59
PPP4R1-206ENST00000577779 CD109Q6YHK3 1445 aa24.95■■□□□ 1.58
PPP4R1-206ENST00000577779 KIF21BO75037 1637 aa24.94■■□□□ 1.58
PPP4R1-206ENST00000577779 MAGI3Q5TCQ9 1506 aa24.94■■□□□ 1.58
PPP4R1-206ENST00000577779 UGGT2Q9NYU1 1516 aa24.94■■□□□ 1.58
PPP4R1-206ENST00000577779 CFAP43Q8NDM7 1665 aa24.92■■□□□ 1.58
PPP4R1-206ENST00000577779 KIAA0556O60303 1618 aa24.92■■□□□ 1.58
PPP4R1-206ENST00000577779 KCNH8Q96L42 1107 aa24.89■■□□□ 1.58
PPP4R1-206ENST00000577779 PTPRMP28827 1452 aa24.82■■□□□ 1.56
PPP4R1-206ENST00000577779 RAPGEF2Q9Y4G8 1499 aa24.81■■□□□ 1.56
PPP4R1-206ENST00000577779 PHF23Q9BUL5 403 aaPredicted RBP24.78■■□□□ 1.56
PPP4R1-206ENST00000577779 ARAP3Q8WWN8 1544 aa24.77■■□□□ 1.56
PPP4R1-206ENST00000577779 ADAMTSL3P82987 1691 aa24.77■■□□□ 1.56
PPP4R1-206ENST00000577779 ABCA8O94911 1581 aa24.73■■□□□ 1.55
PPP4R1-206ENST00000577779 PCF11O94913 1555 aaKnown RBP24.71■■□□□ 1.55
PPP4R1-206ENST00000577779 LMTK3Q96Q04 1460 aa24.71■■□□□ 1.55
PPP4R1-206ENST00000577779 GOLGA3Q08378 1498 aa24.69■■□□□ 1.54
PPP4R1-206ENST00000577779 CTTNBP2Q8WZ74 1663 aa24.66■■□□□ 1.54
PPP4R1-206ENST00000577779 BCORL1Q5H9F3 1711 aa24.64■■□□□ 1.54
PPP4R1-206ENST00000577779 PHLDB1Q86UU1 1377 aa24.64■■□□□ 1.53
PPP4R1-206ENST00000577779 MADDQ8WXG6 1647 aa24.64■■□□□ 1.53
PPP4R1-206ENST00000577779 ARID4BQ4LE39 1312 aaPredicted RBP24.63■■□□□ 1.53
PPP4R1-206ENST00000577779 RAPGEF3O95398 923 aa24.62■■□□□ 1.53
PPP4R1-206ENST00000577779 ARID3CA6NKF2 412 aa24.59■■□□□ 1.53
PPP4R1-206ENST00000577779 ABCA9Q8IUA7 1624 aa24.57■■□□□ 1.52
PPP4R1-206ENST00000577779 NEO1Q92859 1461 aa24.54■■□□□ 1.52
PPP4R1-206ENST00000577779 RIMS1Q86UR5 1692 aaKnown RBP24.53■■□□□ 1.52
PPP4R1-206ENST00000577779 ATP10BO94823 1461 aa24.53■■□□□ 1.52
PPP4R1-206ENST00000577779 HSPA2P54652 639 aa24.53■■□□□ 1.52
PPP4R1-206ENST00000577779 FAM9AQ8IZU1 332 aaPredicted RBP24.52■■□□□ 1.52
PPP4R1-206ENST00000577779 CERKQ8TCT0 537 aa24.52■■□□□ 1.52
PPP4R1-206ENST00000577779 FRMPD1Q5SYB0 1578 aa24.51■■□□□ 1.51
PPP4R1-206ENST00000577779 PLPPR3Q6T4P5 718 aa24.46■■□□□ 1.51
PPP4R1-206ENST00000577779 ARHGEF40Q8TER5 1519 aa24.45■■□□□ 1.51
PPP4R1-206ENST00000577779 DISP3Q9P2K9 1392 aa24.45■■□□□ 1.5
PPP4R1-206ENST00000577779 SENP3Q9H4L4 574 aaPredicted RBP24.45■■□□□ 1.5
PPP4R1-206ENST00000577779 SOCS7O14512 581 aa24.44■■□□□ 1.5
PPP4R1-206ENST00000577779 ILDR2Q71H61 639 aa24.44■■□□□ 1.5
PPP4R1-206ENST00000577779 P3H3Q8IVL6 736 aa24.42■■□□□ 1.5
PPP4R1-206ENST00000577779 POGZQ7Z3K3 1410 aa24.38■■□□□ 1.49
PPP4R1-206ENST00000577779 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.38■■□□□ 1.49
PPP4R1-206ENST00000577779 HNRNPUL2Q1KMD3 747 aaKnown RBP24.38■■□□□ 1.49
PPP4R1-206ENST00000577779 DENND4BO75064 1496 aaPredicted RBP24.37■■□□□ 1.49
PPP4R1-206ENST00000577779 FANCAO15360 1455 aa24.36■■□□□ 1.49
PPP4R1-206ENST00000577779 RICTORQ6R327 1708 aa24.35■■□□□ 1.49
PPP4R1-206ENST00000577779 AKNAQ7Z591 1439 aa24.34■■□□□ 1.49
PPP4R1-206ENST00000577779 PRXQ9BXM0 1461 aa24.33■■□□□ 1.49
PPP4R1-206ENST00000577779 RAPGEF6Q8TEU7 1601 aa24.33■■□□□ 1.49
PPP4R1-206ENST00000577779 FHOD3Q2V2M9 1422 aa24.31■■□□□ 1.48
PPP4R1-206ENST00000577779 SIGLEC1Q9BZZ2 1709 aa24.28■■□□□ 1.48
PPP4R1-206ENST00000577779 MLECQ14165 292 aa24.28■■□□□ 1.48
PPP4R1-206ENST00000577779 FER1L4A9Z1Z3 1794 aa24.27■■□□□ 1.48
PPP4R1-206ENST00000577779 ZFYVE16Q7Z3T8 1539 aa24.27■■□□□ 1.48
PPP4R1-206ENST00000577779 CFAP74Q9C0B2 1584 aa24.27■■□□□ 1.48
PPP4R1-206ENST00000577779 ZMYM4Q5VZL5 1548 aa24.26■■□□□ 1.47
PPP4R1-206ENST00000577779 EFCAB5A4FU69 1503 aa24.25■■□□□ 1.47
PPP4R1-206ENST00000577779 YEATS2Q9ULM3 1422 aa24.25■■□□□ 1.47
PPP4R1-206ENST00000577779 SAMD9Q5K651 1589 aa24.25■■□□□ 1.47
PPP4R1-206ENST00000577779 TTC37Q6PGP7 1564 aa24.25■■□□□ 1.47
PPP4R1-206ENST00000577779 NUP153P49790 1475 aaKnown RBP24.24■■□□□ 1.47
PPP4R1-206ENST00000577779 SPATA31D1Q6ZQQ2 1576 aa24.22■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms