RNA–Protein interactions for RNA: ENST00000577589.1

CUEDC1-205, Transcript of CUE domain containing 1, humanhuman

TSL 3

Gene CUEDC1, Length 705 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1-205ENST00000577589 KDM6BO15054 1643 aa23.33■■□□□ 1.32
CUEDC1-205ENST00000577589 BIVM-ERCC5R4GMW8 1640 aa23.32■■□□□ 1.32
CUEDC1-205ENST00000577589 ERICH3Q5RHP9 1530 aa23.32■■□□□ 1.32
CUEDC1-205ENST00000577589 WRNQ14191 1432 aaPredicted RBP eCLIP23.32■■□□□ 1.32
CUEDC1-205ENST00000577589 RUSC2Q8N2Y8 1516 aa23.31■■□□□ 1.32
CUEDC1-205ENST00000577589 FAM69CQ0P6D2 419 aa23.3■■□□□ 1.32
CUEDC1-205ENST00000577589 TOP2BQ02880 1626 aa23.28■■□□□ 1.32
CUEDC1-205ENST00000577589 TSPOAP1O95153 1857 aa23.25■■□□□ 1.31
CUEDC1-205ENST00000577589 JPH4Q96JJ6 628 aa23.21■■□□□ 1.31
CUEDC1-205ENST00000577589 PPRC1Q5VV67 1664 aaKnown RBP23.13■■□□□ 1.29
CUEDC1-205ENST00000577589 ADGRL1O94910 1474 aa23.07■■□□□ 1.28
CUEDC1-205ENST00000577589 NPM1P06748 294 aaKnown RBP eCLIP23.07■■□□□ 1.28
CUEDC1-205ENST00000577589 HECW2Q9P2P5 1572 aa23.02■■□□□ 1.28
CUEDC1-205ENST00000577589 KIAA0586Q9BVV6 1533 aa22.98■■□□□ 1.27
CUEDC1-205ENST00000577589 GLI2P10070 1586 aa22.96■■□□□ 1.27
CUEDC1-205ENST00000577589 COL17A1Q9UMD9 1497 aaPredicted RBP22.95■■□□□ 1.26
CUEDC1-205ENST00000577589 ABCC2Q92887 1545 aa22.92■■□□□ 1.26
CUEDC1-205ENST00000577589 ASXL2Q76L83 1435 aa22.9■■□□□ 1.26
CUEDC1-205ENST00000577589 CUL7Q14999 1698 aa22.89■■□□□ 1.25
CUEDC1-205ENST00000577589 MAP3K4Q9Y6R4 1608 aa22.86■■□□□ 1.25
CUEDC1-205ENST00000577589 PTPRGP23470 1445 aa22.85■■□□□ 1.25
CUEDC1-205ENST00000577589 PLB1Q6P1J6 1458 aa22.85■■□□□ 1.25
CUEDC1-205ENST00000577589 IGF1RP08069 1367 aa22.82■■□□□ 1.24
CUEDC1-205ENST00000577589 UHRF1BP1LA0JNW5 1464 aa22.79■■□□□ 1.24
CUEDC1-205ENST00000577589 EPRSP07814 1512 aaKnown RBP22.78■■□□□ 1.24
CUEDC1-205ENST00000577589 TNIKQ9UKE5 1360 aa22.76■■□□□ 1.23
CUEDC1-205ENST00000577589 SUPT5HO00267 1087 aaKnown RBP22.74■■□□□ 1.23
CUEDC1-205ENST00000577589 KDM5BQ9UGL1 1544 aa22.72■■□□□ 1.23
CUEDC1-205ENST00000577589 TTBK1Q5TCY1 1321 aaPredicted RBP22.71■■□□□ 1.23
CUEDC1-205ENST00000577589 IQGAP2Q13576 1575 aa22.71■■□□□ 1.23
CUEDC1-205ENST00000577589 ZCCHC11Q5TAX3 1644 aaKnown RBP22.71■■□□□ 1.23
CUEDC1-205ENST00000577589 DISP1Q96F81 1524 aa22.7■■□□□ 1.22
CUEDC1-205ENST00000577589 TEX14Q8IWB6 1497 aa22.69■■□□□ 1.22
CUEDC1-205ENST00000577589 UACAQ9BZF9 1416 aa22.69■■□□□ 1.22
CUEDC1-205ENST00000577589 CARMIL2Q6F5E8 1435 aa22.68■■□□□ 1.22
CUEDC1-205ENST00000577589 KIF27Q86VH2 1401 aa22.68■■□□□ 1.22
CUEDC1-205ENST00000577589 CARMIL1Q5VZK9 1371 aa22.61■■□□□ 1.21
CUEDC1-205ENST00000577589 KIF21BO75037 1637 aa22.6■■□□□ 1.21
CUEDC1-205ENST00000577589 FBXO41Q8TF61 875 aa22.58■■□□□ 1.21
CUEDC1-205ENST00000577589 WDR7Q9Y4E6 1490 aa22.56■■□□□ 1.2
CUEDC1-205ENST00000577589 UGGT2Q9NYU1 1516 aa22.56■■□□□ 1.2
CUEDC1-205ENST00000577589 KIAA0556O60303 1618 aa22.55■■□□□ 1.2
CUEDC1-205ENST00000577589 CFAP43Q8NDM7 1665 aa22.52■■□□□ 1.2
CUEDC1-205ENST00000577589 MAGI3Q5TCQ9 1506 aa22.52■■□□□ 1.19
CUEDC1-205ENST00000577589 ADAMTSL3P82987 1691 aa22.46■■□□□ 1.19
CUEDC1-205ENST00000577589 CD109Q6YHK3 1445 aa22.43■■□□□ 1.18
CUEDC1-205ENST00000577589 PTPRMP28827 1452 aa22.41■■□□□ 1.18
CUEDC1-205ENST00000577589 ABCA8O94911 1581 aa22.4■■□□□ 1.18
CUEDC1-205ENST00000577589 ARAP3Q8WWN8 1544 aa22.37■■□□□ 1.17
CUEDC1-205ENST00000577589 PCF11O94913 1555 aaKnown RBP22.34■■□□□ 1.17
CUEDC1-205ENST00000577589 RAPGEF2Q9Y4G8 1499 aa22.34■■□□□ 1.17
CUEDC1-205ENST00000577589 LMTK3Q96Q04 1460 aa22.33■■□□□ 1.16
CUEDC1-205ENST00000577589 MADDQ8WXG6 1647 aa22.31■■□□□ 1.16
CUEDC1-205ENST00000577589 BCORL1Q5H9F3 1711 aa22.31■■□□□ 1.16
CUEDC1-205ENST00000577589 CTTNBP2Q8WZ74 1663 aa22.31■■□□□ 1.16
CUEDC1-205ENST00000577589 KCNH8Q96L42 1107 aa22.28■■□□□ 1.16
CUEDC1-205ENST00000577589 FRMPD1Q5SYB0 1578 aa22.28■■□□□ 1.16
CUEDC1-205ENST00000577589 ABCA9Q8IUA7 1624 aa22.24■■□□□ 1.15
CUEDC1-205ENST00000577589 RIMS1Q86UR5 1692 aaKnown RBP22.19■■□□□ 1.14
CUEDC1-205ENST00000577589 GOLGA3Q08378 1498 aa22.18■■□□□ 1.14
CUEDC1-205ENST00000577589 ARHGEF40Q8TER5 1519 aa22.15■■□□□ 1.14
CUEDC1-205ENST00000577589 ATP10BO94823 1461 aa22.15■■□□□ 1.14
CUEDC1-205ENST00000577589 RAPGEF3O95398 923 aa22.14■■□□□ 1.13
CUEDC1-205ENST00000577589 SIGLEC1Q9BZZ2 1709 aa22.13■■□□□ 1.13
CUEDC1-205ENST00000577589 NEO1Q92859 1461 aa22.12■■□□□ 1.13
CUEDC1-205ENST00000577589 PHLDB1Q86UU1 1377 aa22.12■■□□□ 1.13
CUEDC1-205ENST00000577589 RICTORQ6R327 1708 aa22.09■■□□□ 1.13
CUEDC1-205ENST00000577589 HSPA2P54652 639 aa22.08■■□□□ 1.13
CUEDC1-205ENST00000577589 ILDR2Q71H61 639 aa22.08■■□□□ 1.13
CUEDC1-205ENST00000577589 ARID3CA6NKF2 412 aa22.07■■□□□ 1.12
CUEDC1-205ENST00000577589 CERKQ8TCT0 537 aa22.02■■□□□ 1.12
CUEDC1-205ENST00000577589 PRXQ9BXM0 1461 aa22■■□□□ 1.11
CUEDC1-205ENST00000577589 ARID4BQ4LE39 1312 aaPredicted RBP22■■□□□ 1.11
CUEDC1-205ENST00000577589 RAPGEF6Q8TEU7 1601 aa21.98■■□□□ 1.11
CUEDC1-205ENST00000577589 ZMYM4Q5VZL5 1548 aa21.97■■□□□ 1.11
CUEDC1-205ENST00000577589 SAMD9Q5K651 1589 aa21.97■■□□□ 1.11
CUEDC1-205ENST00000577589 SOCS7O14512 581 aa21.96■■□□□ 1.11
CUEDC1-205ENST00000577589 TTC37Q6PGP7 1564 aa21.95■■□□□ 1.11
CUEDC1-205ENST00000577589 FER1L4A9Z1Z3 1794 aa21.95■■□□□ 1.1
CUEDC1-205ENST00000577589 FHOD3Q2V2M9 1422 aa21.95■■□□□ 1.1
CUEDC1-205ENST00000577589 DISP3Q9P2K9 1392 aa21.94■■□□□ 1.1
CUEDC1-205ENST00000577589 FANCAO15360 1455 aa21.92■■□□□ 1.1
CUEDC1-205ENST00000577589 DENND4BO75064 1496 aaPredicted RBP21.92■■□□□ 1.1
CUEDC1-205ENST00000577589 NUP153P49790 1475 aaKnown RBP21.92■■□□□ 1.1
CUEDC1-205ENST00000577589 YEATS2Q9ULM3 1422 aa21.92■■□□□ 1.1
CUEDC1-205ENST00000577589 STRCQ7RTU9 1775 aa21.9■■□□□ 1.1
CUEDC1-205ENST00000577589 SPATA31D1Q6ZQQ2 1576 aa21.9■■□□□ 1.1
CUEDC1-205ENST00000577589 ZFYVE16Q7Z3T8 1539 aa21.9■■□□□ 1.1
CUEDC1-205ENST00000577589 P3H3Q8IVL6 736 aa21.89■■□□□ 1.09
CUEDC1-205ENST00000577589 PREX1Q8TCU6 1659 aa21.88■■□□□ 1.09
CUEDC1-205ENST00000577589 AKNAQ7Z591 1439 aa21.88■■□□□ 1.09
CUEDC1-205ENST00000577589 CFAP74Q9C0B2 1584 aa21.87■■□□□ 1.09
CUEDC1-205ENST00000577589 PLPPR3Q6T4P5 718 aa21.87■■□□□ 1.09
CUEDC1-205ENST00000577589 EFCAB5A4FU69 1503 aa21.86■■□□□ 1.09
CUEDC1-205ENST00000577589 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.85■■□□□ 1.09
CUEDC1-205ENST00000577589 POGZQ7Z3K3 1410 aa21.85■■□□□ 1.09
CUEDC1-205ENST00000577589 ARHGEF12Q9NZN5 1544 aa21.85■■□□□ 1.09
CUEDC1-205ENST00000577589 HECW1Q76N89 1606 aa21.84■■□□□ 1.09
CUEDC1-205ENST00000577589 MAGI2Q86UL8 1455 aa21.79■■□□□ 1.08
CUEDC1-205ENST00000577589 MLECQ14165 292 aa21.74■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms