RNA–Protein interactions for RNA: ENST00000577310.1

SNX11-204, Transcript of sorting nexin 11, humanhuman

TSL 3

Gene SNX11, Length 358 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX11-204ENST00000577310 CCDC88BA6NC98 1476 aa11.78□□□□□ -0.52
SNX11-204ENST00000577310 FGD5Q6ZNL6 1462 aa11.76□□□□□ -0.53
SNX11-204ENST00000577310 TOP2BQ02880 1626 aa11.76□□□□□ -0.53
SNX11-204ENST00000577310 GRIN2AQ12879 1464 aa11.76□□□□□ -0.53
SNX11-204ENST00000577310 NUP160Q12769 1436 aa11.75□□□□□ -0.53
SNX11-204ENST00000577310 PPRC1Q5VV67 1664 aaKnown RBP11.71□□□□□ -0.54
SNX11-204ENST00000577310 ADCY10Q96PN6 1610 aa11.7□□□□□ -0.54
SNX11-204ENST00000577310 PRG4Q92954 1404 aaPredicted RBP11.69□□□□□ -0.54
SNX11-204ENST00000577310 SPATA31D1Q6ZQQ2 1576 aa11.68□□□□□ -0.54
SNX11-204ENST00000577310 ABCA5Q8WWZ7 1642 aa11.68□□□□□ -0.54
SNX11-204ENST00000577310 COL17A1Q9UMD9 1497 aaPredicted RBP11.64□□□□□ -0.55
SNX11-204ENST00000577310 GLI2P10070 1586 aa11.63□□□□□ -0.55
SNX11-204ENST00000577310 ADAMTS12P58397 1594 aa11.63□□□□□ -0.55
SNX11-204ENST00000577310 JPH4Q96JJ6 628 aa11.63□□□□□ -0.55
SNX11-204ENST00000577310 CERKQ8TCT0 537 aa11.62□□□□□ -0.55
SNX11-204ENST00000577310 CUX1P39880 1505 aa11.61□□□□□ -0.55
SNX11-204ENST00000577310 ABCA10Q8WWZ4 1543 aa11.6□□□□□ -0.55
SNX11-204ENST00000577310 FHAD1B1AJZ9 1412 aa11.57□□□□□ -0.56
SNX11-204ENST00000577310 PCF11O94913 1555 aaKnown RBP11.55□□□□□ -0.56
SNX11-204ENST00000577310 TEX14Q8IWB6 1497 aa11.55□□□□□ -0.56
SNX11-204ENST00000577310 PLB1Q6P1J6 1458 aa11.54□□□□□ -0.56
SNX11-204ENST00000577310 MAP3K4Q9Y6R4 1608 aa11.53□□□□□ -0.56
SNX11-204ENST00000577310 PTPRMP28827 1452 aa11.52□□□□□ -0.56
SNX11-204ENST00000577310 ASXL2Q76L83 1435 aa11.5□□□□□ -0.57
SNX11-204ENST00000577310 RUSC2Q8N2Y8 1516 aa11.5□□□□□ -0.57
SNX11-204ENST00000577310 KIF21BO75037 1637 aa11.49□□□□□ -0.57
SNX11-204ENST00000577310 ADAMTSL3P82987 1691 aa11.49□□□□□ -0.57
SNX11-204ENST00000577310 ABCC2Q92887 1545 aa11.47□□□□□ -0.57
SNX11-204ENST00000577310 ERICH3Q5RHP9 1530 aa11.46□□□□□ -0.57
SNX11-204ENST00000577310 KIAA0586Q9BVV6 1533 aa11.46□□□□□ -0.57
SNX11-204ENST00000577310 CUL7Q14999 1698 aa11.45□□□□□ -0.58
SNX11-204ENST00000577310 EPRSP07814 1512 aaKnown RBP11.44□□□□□ -0.58
SNX11-204ENST00000577310 PTPRGP23470 1445 aa11.4□□□□□ -0.58
SNX11-204ENST00000577310 WRNQ14191 1432 aaPredicted RBP eCLIP11.38□□□□□ -0.59
SNX11-204ENST00000577310 HSPA2P54652 639 aa11.38□□□□□ -0.59
SNX11-204ENST00000577310 BCORL1Q5H9F3 1711 aa11.37□□□□□ -0.59
SNX11-204ENST00000577310 UHRF1BP1LA0JNW5 1464 aa11.37□□□□□ -0.59
SNX11-204ENST00000577310 MADDQ8WXG6 1647 aa11.36□□□□□ -0.59
SNX11-204ENST00000577310 MAGI3Q5TCQ9 1506 aa11.34□□□□□ -0.59
SNX11-204ENST00000577310 CFAP43Q8NDM7 1665 aa11.33□□□□□ -0.6
SNX11-204ENST00000577310 KDM5BQ9UGL1 1544 aa11.32□□□□□ -0.6
SNX11-204ENST00000577310 TNIKQ9UKE5 1360 aa11.31□□□□□ -0.6
SNX11-204ENST00000577310 RIMS1Q86UR5 1692 aaKnown RBP11.3□□□□□ -0.6
SNX11-204ENST00000577310 DMRT2Q9Y5R5 561 aa11.3□□□□□ -0.6
SNX11-204ENST00000577310 UACAQ9BZF9 1416 aa11.29□□□□□ -0.6
SNX11-204ENST00000577310 ZCCHC11Q5TAX3 1644 aaKnown RBP11.29□□□□□ -0.6
SNX11-204ENST00000577310 ARAP3Q8WWN8 1544 aa11.29□□□□□ -0.6
SNX11-204ENST00000577310 CD109Q6YHK3 1445 aa11.28□□□□□ -0.6
SNX11-204ENST00000577310 IQSEC2Q5JU85 1478 aa11.28□□□□□ -0.6
SNX11-204ENST00000577310 TTBK1Q5TCY1 1321 aaPredicted RBP11.28□□□□□ -0.6
SNX11-204ENST00000577310 CARMIL2Q6F5E8 1435 aa11.27□□□□□ -0.6
SNX11-204ENST00000577310 STRCQ7RTU9 1775 aa11.26□□□□□ -0.61
SNX11-204ENST00000577310 BIVM-ERCC5R4GMW8 1640 aa11.25□□□□□ -0.61
SNX11-204ENST00000577310 YEATS2Q9ULM3 1422 aa11.25□□□□□ -0.61
SNX11-204ENST00000577310 WDR7Q9Y4E6 1490 aa11.25□□□□□ -0.61
SNX11-204ENST00000577310 ARID4BQ4LE39 1312 aaPredicted RBP11.23□□□□□ -0.61
SNX11-204ENST00000577310 PREX1Q8TCU6 1659 aa11.2□□□□□ -0.62
SNX11-204ENST00000577310 PHLDB1Q86UU1 1377 aa11.2□□□□□ -0.62
SNX11-204ENST00000577310 MED1Q15648 1581 aaPredicted RBP11.2□□□□□ -0.62
SNX11-204ENST00000577310 SETD1BQ9UPS6 1966 aaKnown RBP11.19□□□□□ -0.62
SNX11-204ENST00000577310 LTBP4Q8N2S1 1624 aa11.19□□□□□ -0.62
SNX11-204ENST00000577310 PTPRTO14522 1441 aa11.17□□□□□ -0.62
SNX11-204ENST00000577310 PLPPR3Q6T4P5 718 aa11.15□□□□□ -0.62
SNX11-204ENST00000577310 KCNH8Q96L42 1107 aa11.14□□□□□ -0.63
SNX11-204ENST00000577310 FER1L4A9Z1Z3 1794 aa11.13□□□□□ -0.63
SNX11-204ENST00000577310 TTC37Q6PGP7 1564 aa11.13□□□□□ -0.63
SNX11-204ENST00000577310 POGZQ7Z3K3 1410 aa11.13□□□□□ -0.63
SNX11-204ENST00000577310 RAPGEF3O95398 923 aa11.13□□□□□ -0.63
SNX11-204ENST00000577310 IQGAP2Q13576 1575 aa11.11□□□□□ -0.63
SNX11-204ENST00000577310 DISP1Q96F81 1524 aa11.11□□□□□ -0.63
SNX11-204ENST00000577310 UBAP1LF5GYI3 381 aa11.11□□□□□ -0.63
SNX11-204ENST00000577310 ARHGEF40Q8TER5 1519 aa11.09□□□□□ -0.63
SNX11-204ENST00000577310 SRCAPQ6ZRS2 3230 aa11.09□□□□□ -0.63
SNX11-204ENST00000577310 FRMPD1Q5SYB0 1578 aa11.09□□□□□ -0.63
SNX11-204ENST00000577310 FANCAO15360 1455 aa11.09□□□□□ -0.63
SNX11-204ENST00000577310 PHF23Q9BUL5 403 aaPredicted RBP11.09□□□□□ -0.63
SNX11-204ENST00000577310 NEO1Q92859 1461 aa11.07□□□□□ -0.64
SNX11-204ENST00000577310 IGF1RP08069 1367 aa11.07□□□□□ -0.64
SNX11-204ENST00000577310 ABCA9Q8IUA7 1624 aa11.05□□□□□ -0.64
SNX11-204ENST00000577310 UHRF1BP1Q6BDS2 1440 aa11.04□□□□□ -0.64
SNX11-204ENST00000577310 RICTORQ6R327 1708 aa11.04□□□□□ -0.64
SNX11-204ENST00000577310 SIGLEC1Q9BZZ2 1709 aa11.04□□□□□ -0.64
SNX11-204ENST00000577310 HSPA1LP34931 641 aa11.03□□□□□ -0.64
SNX11-204ENST00000577310 UGGT2Q9NYU1 1516 aa11.02□□□□□ -0.65
SNX11-204ENST00000577310 KIAA0556O60303 1618 aa11.02□□□□□ -0.65
SNX11-204ENST00000577310 AKNAQ7Z591 1439 aa11.01□□□□□ -0.65
SNX11-204ENST00000577310 ARHGEF12Q9NZN5 1544 aa10.99□□□□□ -0.65
SNX11-204ENST00000577310 ABCA8O94911 1581 aa10.99□□□□□ -0.65
SNX11-204ENST00000577310 MLECQ14165 292 aa10.98□□□□□ -0.65
SNX11-204ENST00000577310 CEBPAP49715 358 aaPredicted RBP10.97□□□□□ -0.65
SNX11-204ENST00000577310 CARMIL1Q5VZK9 1371 aa10.97□□□□□ -0.65
SNX11-204ENST00000577310 FHOD3Q2V2M9 1422 aa10.97□□□□□ -0.65
SNX11-204ENST00000577310 KIF27Q86VH2 1401 aa10.97□□□□□ -0.65
SNX11-204ENST00000577310 DENND4BO75064 1496 aaPredicted RBP10.97□□□□□ -0.65
SNX11-204ENST00000577310 EFCAB5A4FU69 1503 aa10.97□□□□□ -0.65
SNX11-204ENST00000577310 ZMYM4Q5VZL5 1548 aa10.96□□□□□ -0.65
SNX11-204ENST00000577310 NCOA1Q15788 1441 aa10.96□□□□□ -0.65
SNX11-204ENST00000577310 ZFYVE16Q7Z3T8 1539 aa10.95□□□□□ -0.66
SNX11-204ENST00000577310 MAGI2Q86UL8 1455 aa10.95□□□□□ -0.66
SNX11-204ENST00000577310 ZNF335Q9H4Z2 1342 aaPredicted RBP10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms