RNA–Protein interactions for RNA: ENST00000576958.1

PRPF8-215, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 2

Gene PRPF8, Length 416 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-215ENST00000576958 IGF1RP08069 1367 aa21.27■■□□□ 1
PRPF8-215ENST00000576958 ADCY10Q96PN6 1610 aa21.21■□□□□ 0.99
PRPF8-215ENST00000576958 KIF27Q86VH2 1401 aa21.19■□□□□ 0.98
PRPF8-215ENST00000576958 CUL7Q14999 1698 aa21.16■□□□□ 0.98
PRPF8-215ENST00000576958 KIAA0586Q9BVV6 1533 aa21.16■□□□□ 0.98
PRPF8-215ENST00000576958 TTBK1Q5TCY1 1321 aaPredicted RBP21.13■□□□□ 0.97
PRPF8-215ENST00000576958 FAM69CQ0P6D2 419 aa21.1■□□□□ 0.97
PRPF8-215ENST00000576958 AEBP2Q6ZN18 517 aaPredicted RBP21.1■□□□□ 0.97
PRPF8-215ENST00000576958 DIP2BQ9P265 1576 aa21.1■□□□□ 0.97
PRPF8-215ENST00000576958 CARMIL1Q5VZK9 1371 aa21.1■□□□□ 0.97
PRPF8-215ENST00000576958 ABCC10Q5T3U5 1492 aa21.08■□□□□ 0.97
PRPF8-215ENST00000576958 MAPKBP1O60336 1514 aa21.07■□□□□ 0.96
PRPF8-215ENST00000576958 TSPOAP1O95153 1857 aa21.01■□□□□ 0.95
PRPF8-215ENST00000576958 NPM1P06748 294 aaKnown RBP eCLIP21.01■□□□□ 0.95
PRPF8-215ENST00000576958 PTPRGP23470 1445 aa20.99■□□□□ 0.95
PRPF8-215ENST00000576958 IQGAP2Q13576 1575 aa20.98■□□□□ 0.95
PRPF8-215ENST00000576958 DISP1Q96F81 1524 aa20.95■□□□□ 0.94
PRPF8-215ENST00000576958 TNIKQ9UKE5 1360 aa20.93■□□□□ 0.94
PRPF8-215ENST00000576958 ABCC2Q92887 1545 aa20.9■□□□□ 0.94
PRPF8-215ENST00000576958 KDM6BO15054 1643 aa20.89■□□□□ 0.94
PRPF8-215ENST00000576958 RAPGEF2Q9Y4G8 1499 aa20.88■□□□□ 0.93
PRPF8-215ENST00000576958 CARMIL2Q6F5E8 1435 aa20.88■□□□□ 0.93
PRPF8-215ENST00000576958 ASXL2Q76L83 1435 aa20.87■□□□□ 0.93
PRPF8-215ENST00000576958 PPRC1Q5VV67 1664 aaKnown RBP20.86■□□□□ 0.93
PRPF8-215ENST00000576958 KIAA0556O60303 1618 aa20.84■□□□□ 0.93
PRPF8-215ENST00000576958 UGGT2Q9NYU1 1516 aa20.83■□□□□ 0.93
PRPF8-215ENST00000576958 UACAQ9BZF9 1416 aa20.83■□□□□ 0.93
PRPF8-215ENST00000576958 UHRF1BP1LA0JNW5 1464 aa20.81■□□□□ 0.92
PRPF8-215ENST00000576958 KDM4FA0A1W2PPD8 638 aa20.8■□□□□ 0.92
PRPF8-215ENST00000576958 ZCCHC11Q5TAX3 1644 aaKnown RBP20.79■□□□□ 0.92
PRPF8-215ENST00000576958 KDM5BQ9UGL1 1544 aa20.76■□□□□ 0.91
PRPF8-215ENST00000576958 CTTNBP2Q8WZ74 1663 aa20.76■□□□□ 0.91
PRPF8-215ENST00000576958 GLI2P10070 1586 aa20.76■□□□□ 0.91
PRPF8-215ENST00000576958 PLB1Q6P1J6 1458 aa20.75■□□□□ 0.91
PRPF8-215ENST00000576958 COL17A1Q9UMD9 1497 aaPredicted RBP20.75■□□□□ 0.91
PRPF8-215ENST00000576958 EPRSP07814 1512 aaKnown RBP20.74■□□□□ 0.91
PRPF8-215ENST00000576958 MAP3K4Q9Y6R4 1608 aa20.71■□□□□ 0.91
PRPF8-215ENST00000576958 PRXQ9BXM0 1461 aa20.69■□□□□ 0.9
PRPF8-215ENST00000576958 ABCA8O94911 1581 aa20.64■□□□□ 0.9
PRPF8-215ENST00000576958 ARID3CA6NKF2 412 aa20.64■□□□□ 0.89
PRPF8-215ENST00000576958 WDR7Q9Y4E6 1490 aa20.62■□□□□ 0.89
PRPF8-215ENST00000576958 P3H3Q8IVL6 736 aa20.62■□□□□ 0.89
PRPF8-215ENST00000576958 ADGRL1O94910 1474 aa20.58■□□□□ 0.89
PRPF8-215ENST00000576958 KCNH8Q96L42 1107 aa20.58■□□□□ 0.89
PRPF8-215ENST00000576958 GOLGA3Q08378 1498 aa20.56■□□□□ 0.88
PRPF8-215ENST00000576958 TEX14Q8IWB6 1497 aa20.52■□□□□ 0.88
PRPF8-215ENST00000576958 RANGAP1P46060 587 aaPredicted RBP20.5■□□□□ 0.87
PRPF8-215ENST00000576958 CD109Q6YHK3 1445 aa20.5■□□□□ 0.87
PRPF8-215ENST00000576958 ATP10BO94823 1461 aa20.48■□□□□ 0.87
PRPF8-215ENST00000576958 CFAP43Q8NDM7 1665 aa20.48■□□□□ 0.87
PRPF8-215ENST00000576958 SAMD9Q5K651 1589 aa20.47■□□□□ 0.87
PRPF8-215ENST00000576958 CSRNP3Q8WYN3 585 aa20.47■□□□□ 0.87
PRPF8-215ENST00000576958 FAM9AQ8IZU1 332 aaPredicted RBP20.46■□□□□ 0.87
PRPF8-215ENST00000576958 MAGI3Q5TCQ9 1506 aa20.46■□□□□ 0.87
PRPF8-215ENST00000576958 KIF21BO75037 1637 aa20.4■□□□□ 0.86
PRPF8-215ENST00000576958 FHOD3Q2V2M9 1422 aa20.4■□□□□ 0.86
PRPF8-215ENST00000576958 RAPGEF6Q8TEU7 1601 aa20.4■□□□□ 0.86
PRPF8-215ENST00000576958 EHMT2Q96KQ7 1210 aa20.37■□□□□ 0.85
PRPF8-215ENST00000576958 NUP153P49790 1475 aaKnown RBP20.37■□□□□ 0.85
PRPF8-215ENST00000576958 ABCA9Q8IUA7 1624 aa20.35■□□□□ 0.85
PRPF8-215ENST00000576958 HECW2Q9P2P5 1572 aa20.34■□□□□ 0.85
PRPF8-215ENST00000576958 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.31■□□□□ 0.84
PRPF8-215ENST00000576958 HNRNPUL2Q1KMD3 747 aaKnown RBP20.31■□□□□ 0.84
PRPF8-215ENST00000576958 RAPGEF3O95398 923 aa20.3■□□□□ 0.84
PRPF8-215ENST00000576958 ARAP3Q8WWN8 1544 aa20.3■□□□□ 0.84
PRPF8-215ENST00000576958 FRMPD1Q5SYB0 1578 aa20.29■□□□□ 0.84
PRPF8-215ENST00000576958 EEA1Q15075 1411 aa20.25■□□□□ 0.83
PRPF8-215ENST00000576958 ILDR1Q86SU0 546 aaPredicted RBP20.23■□□□□ 0.83
PRPF8-215ENST00000576958 CDK13Q14004 1512 aaKnown RBP20.22■□□□□ 0.83
PRPF8-215ENST00000576958 TTC37Q6PGP7 1564 aa20.21■□□□□ 0.83
PRPF8-215ENST00000576958 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.18■□□□□ 0.82
PRPF8-215ENST00000576958 NEO1Q92859 1461 aa20.18■□□□□ 0.82
PRPF8-215ENST00000576958 ADAMTSL3P82987 1691 aa20.16■□□□□ 0.82
PRPF8-215ENST00000576958 EFCAB5A4FU69 1503 aa20.15■□□□□ 0.82
PRPF8-215ENST00000576958 SIGLEC1Q9BZZ2 1709 aa20.15■□□□□ 0.82
PRPF8-215ENST00000576958 RICTORQ6R327 1708 aa20.13■□□□□ 0.81
PRPF8-215ENST00000576958 CHIC1Q5VXU3 224 aa20.13■□□□□ 0.81
PRPF8-215ENST00000576958 PLEKHD1A6NEE1 506 aa20.12■□□□□ 0.81
PRPF8-215ENST00000576958 MADDQ8WXG6 1647 aa20.12■□□□□ 0.81
PRPF8-215ENST00000576958 PTPRMP28827 1452 aa20.11■□□□□ 0.81
PRPF8-215ENST00000576958 BCORL1Q5H9F3 1711 aa20.11■□□□□ 0.81
PRPF8-215ENST00000576958 FANCAO15360 1455 aa20.11■□□□□ 0.81
PRPF8-215ENST00000576958 AKNAQ7Z591 1439 aa20.1■□□□□ 0.81
PRPF8-215ENST00000576958 PHLDB1Q86UU1 1377 aa20.1■□□□□ 0.81
PRPF8-215ENST00000576958 ARHGAP35Q9NRY4 1499 aa20.1■□□□□ 0.81
PRPF8-215ENST00000576958 ARHGEF40Q8TER5 1519 aa20.09■□□□□ 0.81
PRPF8-215ENST00000576958 UBTFP17480 764 aaKnown RBP20.08■□□□□ 0.81
PRPF8-215ENST00000576958 YEATS2Q9ULM3 1422 aa20.08■□□□□ 0.8
PRPF8-215ENST00000576958 ARID4BQ4LE39 1312 aaPredicted RBP20.07■□□□□ 0.8
PRPF8-215ENST00000576958 DENND4BO75064 1496 aaPredicted RBP20.07■□□□□ 0.8
PRPF8-215ENST00000576958 ATP1B4Q9UN42 357 aaPredicted RBP20.07■□□□□ 0.8
PRPF8-215ENST00000576958 LRRIQ1Q96JM4 1722 aa20.06■□□□□ 0.8
PRPF8-215ENST00000576958 KIF14Q15058 1648 aa20.05■□□□□ 0.8
PRPF8-215ENST00000576958 RIMS1Q86UR5 1692 aaKnown RBP20.04■□□□□ 0.8
PRPF8-215ENST00000576958 PLPPR3Q6T4P5 718 aa20.03■□□□□ 0.8
PRPF8-215ENST00000576958 HECW1Q76N89 1606 aa20.02■□□□□ 0.79
PRPF8-215ENST00000576958 CFAP74Q9C0B2 1584 aa20■□□□□ 0.79
PRPF8-215ENST00000576958 ZMYM4Q5VZL5 1548 aa19.99■□□□□ 0.79
PRPF8-215ENST00000576958 ZFYVE16Q7Z3T8 1539 aa19.99■□□□□ 0.79
PRPF8-215ENST00000576958 PLCH2O75038 1416 aa19.98■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms