RNA–Protein interactions for RNA: ENST00000575857.3

SLC12A4-215, Transcript of solute carrier family 12 member 4, humanhuman

TSL 3

Gene SLC12A4, Length 588 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC12A4-215ENST00000575857 CEP170Q5SW79 1584 aa18.18■□□□□ 0.5
SLC12A4-215ENST00000575857 EEA1Q15075 1411 aa18.17■□□□□ 0.5
SLC12A4-215ENST00000575857 PRXQ9BXM0 1461 aa18.14■□□□□ 0.5
SLC12A4-215ENST00000575857 CSRNP3Q8WYN3 585 aa18.13■□□□□ 0.49
SLC12A4-215ENST00000575857 RAPGEF2Q9Y4G8 1499 aa18.13■□□□□ 0.49
SLC12A4-215ENST00000575857 FAM9AQ8IZU1 332 aaPredicted RBP18.06■□□□□ 0.48
SLC12A4-215ENST00000575857 KIAA0586Q9BVV6 1533 aa18.06■□□□□ 0.48
SLC12A4-215ENST00000575857 SHROOM2Q13796 1616 aa18.04■□□□□ 0.48
SLC12A4-215ENST00000575857 AEBP2Q6ZN18 517 aaPredicted RBP18.03■□□□□ 0.48
SLC12A4-215ENST00000575857 PRG4Q92954 1404 aaPredicted RBP18■□□□□ 0.47
SLC12A4-215ENST00000575857 JPH4Q96JJ6 628 aa18■□□□□ 0.47
SLC12A4-215ENST00000575857 KIF21BO75037 1637 aa17.97■□□□□ 0.47
SLC12A4-215ENST00000575857 IQGAP2Q13576 1575 aa17.95■□□□□ 0.46
SLC12A4-215ENST00000575857 UGGT2Q9NYU1 1516 aa17.9■□□□□ 0.46
SLC12A4-215ENST00000575857 CTTNBP2Q8WZ74 1663 aa17.89■□□□□ 0.45
SLC12A4-215ENST00000575857 GOLGA3Q08378 1498 aa17.87■□□□□ 0.45
SLC12A4-215ENST00000575857 DISP1Q96F81 1524 aa17.86■□□□□ 0.45
SLC12A4-215ENST00000575857 FAM69CQ0P6D2 419 aa17.85■□□□□ 0.45
SLC12A4-215ENST00000575857 KIF13AQ9H1H9 1805 aa17.85■□□□□ 0.45
SLC12A4-215ENST00000575857 CARMIL2Q6F5E8 1435 aa17.81■□□□□ 0.44
SLC12A4-215ENST00000575857 ADCY10Q96PN6 1610 aa17.81■□□□□ 0.44
SLC12A4-215ENST00000575857 ABCC10Q5T3U5 1492 aa17.81■□□□□ 0.44
SLC12A4-215ENST00000575857 KIAA0556O60303 1618 aa17.79■□□□□ 0.44
SLC12A4-215ENST00000575857 TNIKQ9UKE5 1360 aa17.79■□□□□ 0.44
SLC12A4-215ENST00000575857 NPM1P06748 294 aaKnown RBP eCLIP17.78■□□□□ 0.44
SLC12A4-215ENST00000575857 EHMT2Q96KQ7 1210 aa17.78■□□□□ 0.44
SLC12A4-215ENST00000575857 TTBK1Q5TCY1 1321 aaPredicted RBP17.77■□□□□ 0.44
SLC12A4-215ENST00000575857 UBTFP17480 764 aaKnown RBP17.77■□□□□ 0.44
SLC12A4-215ENST00000575857 MAPKBP1O60336 1514 aa17.76■□□□□ 0.43
SLC12A4-215ENST00000575857 PTPRGP23470 1445 aa17.75■□□□□ 0.43
SLC12A4-215ENST00000575857 SAMD9Q5K651 1589 aa17.74■□□□□ 0.43
SLC12A4-215ENST00000575857 DIP2BQ9P265 1576 aa17.74■□□□□ 0.43
SLC12A4-215ENST00000575857 EFCAB5A4FU69 1503 aa17.67■□□□□ 0.42
SLC12A4-215ENST00000575857 P3H3Q8IVL6 736 aa17.67■□□□□ 0.42
SLC12A4-215ENST00000575857 RANGAP1P46060 587 aaPredicted RBP17.65■□□□□ 0.42
SLC12A4-215ENST00000575857 UACAQ9BZF9 1416 aa17.64■□□□□ 0.42
SLC12A4-215ENST00000575857 UHRF1BP1LA0JNW5 1464 aa17.64■□□□□ 0.41
SLC12A4-215ENST00000575857 ARHGAP35Q9NRY4 1499 aa17.64■□□□□ 0.41
SLC12A4-215ENST00000575857 FHOD3Q2V2M9 1422 aa17.64■□□□□ 0.41
SLC12A4-215ENST00000575857 KDM4FA0A1W2PPD8 638 aa17.63■□□□□ 0.41
SLC12A4-215ENST00000575857 LOC105371045A0A1W2PR82 267 aa17.63■□□□□ 0.41
SLC12A4-215ENST00000575857 KDM6BO15054 1643 aa17.62■□□□□ 0.41
SLC12A4-215ENST00000575857 PLB1Q6P1J6 1458 aa17.62■□□□□ 0.41
SLC12A4-215ENST00000575857 ABCA8O94911 1581 aa17.62■□□□□ 0.41
SLC12A4-215ENST00000575857 ABCC2Q92887 1545 aa17.61■□□□□ 0.41
SLC12A4-215ENST00000575857 TSPOAP1O95153 1857 aa17.6■□□□□ 0.41
SLC12A4-215ENST00000575857 ASXL2Q76L83 1435 aa17.58■□□□□ 0.41
SLC12A4-215ENST00000575857 KDM5BQ9UGL1 1544 aa17.56■□□□□ 0.4
SLC12A4-215ENST00000575857 CLIP1P30622 1438 aa17.55■□□□□ 0.4
SLC12A4-215ENST00000575857 CEP162Q5TB80 1403 aa17.52■□□□□ 0.4
SLC12A4-215ENST00000575857 RAPGEF6Q8TEU7 1601 aa17.5■□□□□ 0.39
SLC12A4-215ENST00000575857 FMN1Q68DA7 1419 aa17.5■□□□□ 0.39
SLC12A4-215ENST00000575857 PPRC1Q5VV67 1664 aaKnown RBP17.5■□□□□ 0.39
SLC12A4-215ENST00000575857 NUP153P49790 1475 aaKnown RBP17.49■□□□□ 0.39
SLC12A4-215ENST00000575857 COL17A1Q9UMD9 1497 aaPredicted RBP17.49■□□□□ 0.39
SLC12A4-215ENST00000575857 ZCCHC11Q5TAX3 1644 aaKnown RBP17.47■□□□□ 0.39
SLC12A4-215ENST00000575857 ATP10BO94823 1461 aa17.47■□□□□ 0.39
SLC12A4-215ENST00000575857 GLI2P10070 1586 aa17.47■□□□□ 0.39
SLC12A4-215ENST00000575857 EPRSP07814 1512 aaKnown RBP17.46■□□□□ 0.39
SLC12A4-215ENST00000575857 CASKIN1Q8WXD9 1431 aa17.41■□□□□ 0.38
SLC12A4-215ENST00000575857 ARID3CA6NKF2 412 aa17.41■□□□□ 0.38
SLC12A4-215ENST00000575857 ADGRL1O94910 1474 aa17.4■□□□□ 0.38
SLC12A4-215ENST00000575857 MAP3K4Q9Y6R4 1608 aa17.39■□□□□ 0.37
SLC12A4-215ENST00000575857 WDR7Q9Y4E6 1490 aa17.38■□□□□ 0.37
SLC12A4-215ENST00000575857 PCF11O94913 1555 aaKnown RBP17.38■□□□□ 0.37
SLC12A4-215ENST00000575857 HECW1Q76N89 1606 aa17.38■□□□□ 0.37
SLC12A4-215ENST00000575857 FYCO1Q9BQS8 1478 aa17.36■□□□□ 0.37
SLC12A4-215ENST00000575857 CDK13Q14004 1512 aaKnown RBP17.36■□□□□ 0.37
SLC12A4-215ENST00000575857 KCNH8Q96L42 1107 aa17.33■□□□□ 0.36
SLC12A4-215ENST00000575857 TEX14Q8IWB6 1497 aa17.32■□□□□ 0.36
SLC12A4-215ENST00000575857 ATP1B4Q9UN42 357 aaPredicted RBP17.32■□□□□ 0.36
SLC12A4-215ENST00000575857 LRRIQ1Q96JM4 1722 aa17.32■□□□□ 0.36
SLC12A4-215ENST00000575857 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.31■□□□□ 0.36
SLC12A4-215ENST00000575857 HNRNPUL2Q1KMD3 747 aaKnown RBP17.31■□□□□ 0.36
SLC12A4-215ENST00000575857 VPS8Q8N3P4 1428 aa17.3■□□□□ 0.36
SLC12A4-215ENST00000575857 CCDC18Q5T9S5 1454 aa17.29■□□□□ 0.36
SLC12A4-215ENST00000575857 PLEKHD1A6NEE1 506 aa17.28■□□□□ 0.36
SLC12A4-215ENST00000575857 CD109Q6YHK3 1445 aa17.28■□□□□ 0.36
SLC12A4-215ENST00000575857 ILDR1Q86SU0 546 aaPredicted RBP17.27■□□□□ 0.36
SLC12A4-215ENST00000575857 TROQ12816 1431 aaPredicted RBP17.23■□□□□ 0.35
SLC12A4-215ENST00000575857 MAGI3Q5TCQ9 1506 aa17.23■□□□□ 0.35
SLC12A4-215ENST00000575857 CDK11AQ9UQ88 783 aaPredicted RBP17.23■□□□□ 0.35
SLC12A4-215ENST00000575857 ABCA9Q8IUA7 1624 aa17.21■□□□□ 0.35
SLC12A4-215ENST00000575857 HECW2Q9P2P5 1572 aa17.2■□□□□ 0.34
SLC12A4-215ENST00000575857 CFAP43Q8NDM7 1665 aa17.2■□□□□ 0.34
SLC12A4-215ENST00000575857 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.19■□□□□ 0.34
SLC12A4-215ENST00000575857 KIF14Q15058 1648 aa17.16■□□□□ 0.34
SLC12A4-215ENST00000575857 TTC37Q6PGP7 1564 aa17.15■□□□□ 0.34
SLC12A4-215ENST00000575857 MAP3K1Q13233 1512 aa17.15■□□□□ 0.34
SLC12A4-215ENST00000575857 TIAM1Q13009 1591 aa17.15■□□□□ 0.34
SLC12A4-215ENST00000575857 RAPGEF3O95398 923 aa17.11■□□□□ 0.33
SLC12A4-215ENST00000575857 MTUS2Q5JR59 1369 aa17.11■□□□□ 0.33
SLC12A4-215ENST00000575857 EHBP1L1Q8N3D4 1523 aa17.11■□□□□ 0.33
SLC12A4-215ENST00000575857 PLCH2O75038 1416 aa17.1■□□□□ 0.33
SLC12A4-215ENST00000575857 ARAP3Q8WWN8 1544 aa17.1■□□□□ 0.33
SLC12A4-215ENST00000575857 LRRC9Q6ZRR7 1453 aa17.09■□□□□ 0.33
SLC12A4-215ENST00000575857 KANK4Q5T7N3 995 aaPredicted RBP17.08■□□□□ 0.32
SLC12A4-215ENST00000575857 NEO1Q92859 1461 aa17.07■□□□□ 0.32
SLC12A4-215ENST00000575857 FANCAO15360 1455 aa17.05■□□□□ 0.32
SLC12A4-215ENST00000575857 PHLDB1Q86UU1 1377 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms