RNA–Protein interactions for RNA: ENST00000574897.5

NPLOC4-217, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 2

Gene NPLOC4, Length 2,365 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-217ENST00000574897 FHOD3Q2V2M9 1422 aa35.66■■■■□ 3.3
NPLOC4-217ENST00000574897 PCF11O94913 1555 aaKnown RBP35.64■■■■□ 3.3
NPLOC4-217ENST00000574897 MRC2Q9UBG0 1479 aa35.61■■■■□ 3.29
NPLOC4-217ENST00000574897 RRBP1Q9P2E9 1410 aaKnown RBP35.58■■■■□ 3.29
NPLOC4-217ENST00000574897 EFCAB5A4FU69 1503 aa35.57■■■■□ 3.28
NPLOC4-217ENST00000574897 PBRM1Q86U86 1689 aa35.56■■■■□ 3.28
NPLOC4-217ENST00000574897 FHAD1B1AJZ9 1412 aa35.56■■■■□ 3.28
NPLOC4-217ENST00000574897 MAP3K1Q13233 1512 aa35.54■■■■□ 3.28
NPLOC4-217ENST00000574897 CFAP43Q8NDM7 1665 aa35.52■■■■□ 3.28
NPLOC4-217ENST00000574897 AQRO60306 1485 aaKnown RBP eCLIP35.5■■■■□ 3.277e-8■■■■□ 22.4
NPLOC4-217ENST00000574897 ATP1B4Q9UN42 357 aaPredicted RBP35.5■■■■□ 3.27
NPLOC4-217ENST00000574897 LRRC9Q6ZRR7 1453 aa35.49■■■■□ 3.27
NPLOC4-217ENST00000574897 CCNB3Q8WWL7 1395 aa35.45■■■■□ 3.27
NPLOC4-217ENST00000574897 SAMD9Q5K651 1589 aa35.4■■■■□ 3.26
NPLOC4-217ENST00000574897 FYCO1Q9BQS8 1478 aa35.4■■■■□ 3.26
NPLOC4-217ENST00000574897 WDR62O43379 1518 aa35.38■■■■□ 3.25
NPLOC4-217ENST00000574897 CASKIN1Q8WXD9 1431 aa35.37■■■■□ 3.25
NPLOC4-217ENST00000574897 ZNF608Q9ULD9 1512 aaPredicted RBP35.35■■■■□ 3.25
NPLOC4-217ENST00000574897 ITGAEP38570 1179 aa35.35■■■■□ 3.25
NPLOC4-217ENST00000574897 ADAMTS12P58397 1594 aa35.34■■■■□ 3.25
NPLOC4-217ENST00000574897 PHLDB1Q86UU1 1377 aa35.34■■■■□ 3.25
NPLOC4-217ENST00000574897 SNAPC4Q5SXM2 1469 aa35.3■■■■□ 3.24
NPLOC4-217ENST00000574897 FMN1Q68DA7 1419 aa35.29■■■■□ 3.24
NPLOC4-217ENST00000574897 LRRIQ1Q96JM4 1722 aa35.29■■■■□ 3.24
NPLOC4-217ENST00000574897 IFT140Q96RY7 1462 aa35.27■■■■□ 3.24
NPLOC4-217ENST00000574897 GRIN2BQ13224 1484 aa35.26■■■■□ 3.24
NPLOC4-217ENST00000574897 ERCC6Q03468 1493 aa35.24■■■■□ 3.23
NPLOC4-217ENST00000574897 DHX57Q6P158 1386 aaKnown RBP35.23■■■■□ 3.23
NPLOC4-217ENST00000574897 IQGAP2Q13576 1575 aa35.16■■■■□ 3.22
NPLOC4-217ENST00000574897 THOC2Q8NI27 1593 aaKnown RBP35.16■■■■□ 3.22
NPLOC4-217ENST00000574897 EIF4G3O43432 1585 aaKnown RBP35.14■■■■□ 3.22
NPLOC4-217ENST00000574897 FAM50AQ14320 339 aaKnown RBP35.11■■■■□ 3.21
NPLOC4-217ENST00000574897 DIEXFQ68CQ4 756 aaKnown RBP35.02■■■■□ 3.2
NPLOC4-217ENST00000574897 RAB3GAP2Q9H2M9 1393 aa35.02■■■■□ 3.2
NPLOC4-217ENST00000574897 MTUS2Q5JR59 1369 aa35.02■■■■□ 3.2
NPLOC4-217ENST00000574897 ZNF316A6NFI3 1004 aaPredicted RBP35■■■■□ 3.19
NPLOC4-217ENST00000574897 CLSPNQ9HAW4 1339 aa34.98■■■■□ 3.19
NPLOC4-217ENST00000574897 GRIN2AQ12879 1464 aa34.92■■■■□ 3.18
NPLOC4-217ENST00000574897 MAGI3Q5TCQ9 1506 aa34.92■■■■□ 3.18
NPLOC4-217ENST00000574897 UGGT2Q9NYU1 1516 aa34.91■■■■□ 3.18
NPLOC4-217ENST00000574897 FGD6Q6ZV73 1430 aa34.91■■■■□ 3.18
NPLOC4-217ENST00000574897 SETD5Q9C0A6 1442 aa34.91■■■■□ 3.18
NPLOC4-217ENST00000574897 NCOA2Q15596 1464 aa34.88■■■■□ 3.17
NPLOC4-217ENST00000574897 HECW1Q76N89 1606 aa34.88■■■■□ 3.17
NPLOC4-217ENST00000574897 SUPT6HQ7KZ85 1726 aaKnown RBP34.87■■■■□ 3.17
NPLOC4-217ENST00000574897 KIAA0586Q9BVV6 1533 aa34.86■■■■□ 3.17
NPLOC4-217ENST00000574897 EHBP1L1Q8N3D4 1523 aa34.86■■■■□ 3.17
NPLOC4-217ENST00000574897 KIAA0556O60303 1618 aa34.81■■■■□ 3.16
NPLOC4-217ENST00000574897 CCDC18Q5T9S5 1454 aa34.81■■■■□ 3.16
NPLOC4-217ENST00000574897 CDK13Q14004 1512 aaKnown RBP34.81■■■■□ 3.16
NPLOC4-217ENST00000574897 DISP1Q96F81 1524 aa34.81■■■■□ 3.16
NPLOC4-217ENST00000574897 ARID3CA6NKF2 412 aa34.81■■■■□ 3.16
NPLOC4-217ENST00000574897 MAPKBP1O60336 1514 aa34.81■■■■□ 3.16
NPLOC4-217ENST00000574897 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP34.81■■■■□ 3.16
NPLOC4-217ENST00000574897 MAGI1Q96QZ7 1491 aaPredicted RBP34.8■■■■□ 3.16
NPLOC4-217ENST00000574897 EPRSP07814 1512 aaKnown RBP34.8■■■■□ 3.16
NPLOC4-217ENST00000574897 MYOM3Q5VTT5 1437 aa34.77■■■■□ 3.16
NPLOC4-217ENST00000574897 CEP170Q5SW79 1584 aa34.76■■■■□ 3.16
NPLOC4-217ENST00000574897 SYNJ2O15056 1496 aa34.73■■■■□ 3.15
NPLOC4-217ENST00000574897 CHMP7Q8WUX9 453 aaPredicted RBP34.73■■■■□ 3.15
NPLOC4-217ENST00000574897 FBLN2P98095 1184 aa34.73■■■■□ 3.15
NPLOC4-217ENST00000574897 ARHGEF11O15085 1522 aa34.72■■■■□ 3.15
NPLOC4-217ENST00000574897 PTPRKQ15262 1439 aa34.71■■■■□ 3.15
NPLOC4-217ENST00000574897 PTPN23Q9H3S7 1636 aa34.67■■■■□ 3.14
NPLOC4-217ENST00000574897 RAPGEF6Q8TEU7 1601 aa34.6■■■■□ 3.13
NPLOC4-217ENST00000574897 NUP153P49790 1475 aaKnown RBP34.58■■■■□ 3.13
NPLOC4-217ENST00000574897 NUP160Q12769 1436 aa34.54■■■■□ 3.12
NPLOC4-217ENST00000574897 SIN3AQ96ST3 1273 aa34.53■■■■□ 3.12
NPLOC4-217ENST00000574897 HFM1A2PYH4 1435 aa34.51■■■■□ 3.11
NPLOC4-217ENST00000574897 TCOF1Q13428 1488 aaKnown RBP34.48■■■■□ 3.11
NPLOC4-217ENST00000574897 NAIPQ13075 1403 aa34.46■■■■□ 3.11
NPLOC4-217ENST00000574897 PLB1Q6P1J6 1458 aa34.46■■■■□ 3.11
NPLOC4-217ENST00000574897 NEUROD1Q13562 356 aa34.45■■■■□ 3.11
NPLOC4-217ENST00000574897 JPH4Q96JJ6 628 aa34.45■■■■□ 3.11
NPLOC4-217ENST00000574897 MIER1Q8N108 512 aa34.42■■■■□ 3.1
NPLOC4-217ENST00000574897 CHIC2Q9UKJ5 165 aa34.41■■■■□ 3.1
NPLOC4-217ENST00000574897 RRP7BPQ9NSQ0 103 aa34.37■■■■□ 3.09
NPLOC4-217ENST00000574897 MIA2Q96PC5 1412 aa34.37■■■■□ 3.09
NPLOC4-217ENST00000574897 CARMIL2Q6F5E8 1435 aa34.36■■■■□ 3.09
NPLOC4-217ENST00000574897 UACAQ9BZF9 1416 aa34.33■■■■□ 3.09
NPLOC4-217ENST00000574897 GCC2Q8IWJ2 1684 aa34.33■■■■□ 3.09
NPLOC4-217ENST00000574897 PRG4Q92954 1404 aaPredicted RBP34.32■■■■□ 3.09
NPLOC4-217ENST00000574897 KDM6BO15054 1643 aa34.3■■■■□ 3.08
NPLOC4-217ENST00000574897 CHD1O14646 1710 aa34.29■■■■□ 3.08
NPLOC4-217ENST00000574897 CDK11AQ9UQ88 783 aaPredicted RBP34.26■■■■□ 3.08
NPLOC4-217ENST00000574897 ZNF644Q9H582 1327 aaPredicted RBP34.26■■■■□ 3.07
NPLOC4-217ENST00000574897 KIF14Q15058 1648 aa34.24■■■■□ 3.07
NPLOC4-217ENST00000574897 TROQ12816 1431 aaPredicted RBP34.24■■■■□ 3.07
NPLOC4-217ENST00000574897 SCAF1Q9H7N4 1312 aaKnown RBP34.22■■■■□ 3.07
NPLOC4-217ENST00000574897 ABCA8O94911 1581 aa34.2■■■■□ 3.07
NPLOC4-217ENST00000574897 DNMT1P26358 1616 aaKnown RBP34.18■■■■□ 3.06
NPLOC4-217ENST00000574897 ACIN1Q9UKV3 1341 aaKnown RBP34.17■■■■□ 3.06
NPLOC4-217ENST00000574897 DAPK1P53355 1430 aa34.17■■■■□ 3.06
NPLOC4-217ENST00000574897 AKNAQ7Z591 1439 aa34.16■■■■□ 3.06
NPLOC4-217ENST00000574897 ADCY10Q96PN6 1610 aa34.16■■■■□ 3.06
NPLOC4-217ENST00000574897 YTHDC1Q96MU7 727 aaKnown RBP34.14■■■■□ 3.06
NPLOC4-217ENST00000574897 ABCC5O15440 1437 aa34.13■■■■□ 3.05
NPLOC4-217ENST00000574897 ITSN2Q9NZM3 1697 aa34.12■■■■□ 3.05
NPLOC4-217ENST00000574897 DENND4BO75064 1496 aaPredicted RBP34.1■■■■□ 3.05
NPLOC4-217ENST00000574897 TIMELESSQ9UNS1 1208 aa34.1■■■■□ 3.05
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms