RNA–Protein interactions for RNA: ENST00000574776.5

CTNS-209, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 4

Gene CTNS, Length 565 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-209ENST00000574776 RUSC2Q8N2Y8 1516 aa26.49■■□□□ 1.83
CTNS-209ENST00000574776 KIAA0586Q9BVV6 1533 aa26.43■■□□□ 1.82
CTNS-209ENST00000574776 CUL7Q14999 1698 aa26.41■■□□□ 1.82
CTNS-209ENST00000574776 CARMIL1Q5VZK9 1371 aa26.39■■□□□ 1.82
CTNS-209ENST00000574776 NPM1P06748 294 aaKnown RBP eCLIP26.39■■□□□ 1.82
CTNS-209ENST00000574776 KIF13AQ9H1H9 1805 aa26.3■■□□□ 1.8
CTNS-209ENST00000574776 FAM69CQ0P6D2 419 aa26.29■■□□□ 1.8
CTNS-209ENST00000574776 TTBK1Q5TCY1 1321 aaPredicted RBP26.27■■□□□ 1.8
CTNS-209ENST00000574776 ADCY10Q96PN6 1610 aa26.26■■□□□ 1.79
CTNS-209ENST00000574776 AEBP2Q6ZN18 517 aaPredicted RBP26.26■■□□□ 1.79
CTNS-209ENST00000574776 PTPRGP23470 1445 aa26.22■■□□□ 1.79
CTNS-209ENST00000574776 ABCC10Q5T3U5 1492 aa26.22■■□□□ 1.79
CTNS-209ENST00000574776 MAPKBP1O60336 1514 aa26.2■■□□□ 1.79
CTNS-209ENST00000574776 CARMIL2Q6F5E8 1435 aa26.18■■□□□ 1.78
CTNS-209ENST00000574776 TNIKQ9UKE5 1360 aa26.16■■□□□ 1.78
CTNS-209ENST00000574776 IQGAP2Q13576 1575 aa26.15■■□□□ 1.78
CTNS-209ENST00000574776 DIP2BQ9P265 1576 aa26.12■■□□□ 1.77
CTNS-209ENST00000574776 RAPGEF2Q9Y4G8 1499 aa26.11■■□□□ 1.77
CTNS-209ENST00000574776 DISP1Q96F81 1524 aa26.05■■□□□ 1.76
CTNS-209ENST00000574776 ABCC2Q92887 1545 aa26.03■■□□□ 1.76
CTNS-209ENST00000574776 TSPOAP1O95153 1857 aa26■■□□□ 1.75
CTNS-209ENST00000574776 UACAQ9BZF9 1416 aa26■■□□□ 1.75
CTNS-209ENST00000574776 UGGT2Q9NYU1 1516 aa25.98■■□□□ 1.75
CTNS-209ENST00000574776 UHRF1BP1LA0JNW5 1464 aa25.98■■□□□ 1.75
CTNS-209ENST00000574776 ASXL2Q76L83 1435 aa25.97■■□□□ 1.75
CTNS-209ENST00000574776 PLB1Q6P1J6 1458 aa25.93■■□□□ 1.74
CTNS-209ENST00000574776 KDM6BO15054 1643 aa25.9■■□□□ 1.74
CTNS-209ENST00000574776 KIAA0556O60303 1618 aa25.9■■□□□ 1.74
CTNS-209ENST00000574776 KDM5BQ9UGL1 1544 aa25.87■■□□□ 1.73
CTNS-209ENST00000574776 CTTNBP2Q8WZ74 1663 aa25.84■■□□□ 1.73
CTNS-209ENST00000574776 GLI2P10070 1586 aa25.84■■□□□ 1.73
CTNS-209ENST00000574776 PRXQ9BXM0 1461 aa25.84■■□□□ 1.73
CTNS-209ENST00000574776 ZCCHC11Q5TAX3 1644 aaKnown RBP25.8■■□□□ 1.72
CTNS-209ENST00000574776 GOLGA3Q08378 1498 aa25.79■■□□□ 1.72
CTNS-209ENST00000574776 EPRSP07814 1512 aaKnown RBP25.79■■□□□ 1.72
CTNS-209ENST00000574776 PPRC1Q5VV67 1664 aaKnown RBP25.77■■□□□ 1.72
CTNS-209ENST00000574776 KDM4FA0A1W2PPD8 638 aa25.74■■□□□ 1.71
CTNS-209ENST00000574776 CSRNP3Q8WYN3 585 aa25.74■■□□□ 1.71
CTNS-209ENST00000574776 P3H3Q8IVL6 736 aa25.71■■□□□ 1.71
CTNS-209ENST00000574776 MAP3K4Q9Y6R4 1608 aa25.7■■□□□ 1.7
CTNS-209ENST00000574776 KCNH8Q96L42 1107 aa25.69■■□□□ 1.7
CTNS-209ENST00000574776 WDR7Q9Y4E6 1490 aa25.68■■□□□ 1.7
CTNS-209ENST00000574776 ABCA8O94911 1581 aa25.68■■□□□ 1.7
CTNS-209ENST00000574776 COL17A1Q9UMD9 1497 aaPredicted RBP25.67■■□□□ 1.7
CTNS-209ENST00000574776 FAM9AQ8IZU1 332 aaPredicted RBP25.65■■□□□ 1.7
CTNS-209ENST00000574776 TEX14Q8IWB6 1497 aa25.64■■□□□ 1.69
CTNS-209ENST00000574776 ARID3CA6NKF2 412 aa25.62■■□□□ 1.69
CTNS-209ENST00000574776 CD109Q6YHK3 1445 aa25.58■■□□□ 1.69
CTNS-209ENST00000574776 RANGAP1P46060 587 aaPredicted RBP25.55■■□□□ 1.68
CTNS-209ENST00000574776 ATP10BO94823 1461 aa25.53■■□□□ 1.68
CTNS-209ENST00000574776 EEA1Q15075 1411 aa25.52■■□□□ 1.68
CTNS-209ENST00000574776 MAGI3Q5TCQ9 1506 aa25.51■■□□□ 1.67
CTNS-209ENST00000574776 CFAP43Q8NDM7 1665 aa25.5■■□□□ 1.67
CTNS-209ENST00000574776 SAMD9Q5K651 1589 aa25.48■■□□□ 1.67
CTNS-209ENST00000574776 ADGRL1O94910 1474 aa25.47■■□□□ 1.67
CTNS-209ENST00000574776 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.45■■□□□ 1.66
CTNS-209ENST00000574776 HNRNPUL2Q1KMD3 747 aaKnown RBP25.45■■□□□ 1.66
CTNS-209ENST00000574776 RAPGEF6Q8TEU7 1601 aa25.4■■□□□ 1.66
CTNS-209ENST00000574776 FHOD3Q2V2M9 1422 aa25.38■■□□□ 1.65
CTNS-209ENST00000574776 EHMT2Q96KQ7 1210 aa25.34■■□□□ 1.65
CTNS-209ENST00000574776 NUP153P49790 1475 aaKnown RBP25.33■■□□□ 1.65
CTNS-209ENST00000574776 ABCA9Q8IUA7 1624 aa25.32■■□□□ 1.64
CTNS-209ENST00000574776 ARAP3Q8WWN8 1544 aa25.32■■□□□ 1.64
CTNS-209ENST00000574776 KIF21BO75037 1637 aa25.3■■□□□ 1.64
CTNS-209ENST00000574776 PLEKHD1A6NEE1 506 aa25.29■■□□□ 1.64
CTNS-209ENST00000574776 CHIC1Q5VXU3 224 aa25.29■■□□□ 1.64
CTNS-209ENST00000574776 PHLDB1Q86UU1 1377 aa25.28■■□□□ 1.64
CTNS-209ENST00000574776 RAPGEF3O95398 923 aa25.27■■□□□ 1.64
CTNS-209ENST00000574776 UBTFP17480 764 aaKnown RBP25.27■■□□□ 1.64
CTNS-209ENST00000574776 EFCAB5A4FU69 1503 aa25.22■■□□□ 1.63
CTNS-209ENST00000574776 NEO1Q92859 1461 aa25.21■■□□□ 1.63
CTNS-209ENST00000574776 ATP1B4Q9UN42 357 aaPredicted RBP25.15■■□□□ 1.62
CTNS-209ENST00000574776 CDK13Q14004 1512 aaKnown RBP25.1■■□□□ 1.61
CTNS-209ENST00000574776 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP25.1■■□□□ 1.61
CTNS-209ENST00000574776 AKNAQ7Z591 1439 aa25.09■■□□□ 1.61
CTNS-209ENST00000574776 HECW2Q9P2P5 1572 aa25.09■■□□□ 1.61
CTNS-209ENST00000574776 FRMPD1Q5SYB0 1578 aa25.07■■□□□ 1.6
CTNS-209ENST00000574776 ARHGAP35Q9NRY4 1499 aa25.07■■□□□ 1.6
CTNS-209ENST00000574776 ARID4BQ4LE39 1312 aaPredicted RBP25.07■■□□□ 1.6
CTNS-209ENST00000574776 FANCAO15360 1455 aa25.06■■□□□ 1.6
CTNS-209ENST00000574776 DENND4BO75064 1496 aaPredicted RBP25.06■■□□□ 1.6
CTNS-209ENST00000574776 FMN1Q68DA7 1419 aa25.04■■□□□ 1.6
CTNS-209ENST00000574776 TTC37Q6PGP7 1564 aa25.04■■□□□ 1.6
CTNS-209ENST00000574776 ADAMTSL3P82987 1691 aa24.99■■□□□ 1.59
CTNS-209ENST00000574776 RICTORQ6R327 1708 aa24.99■■□□□ 1.59
CTNS-209ENST00000574776 CDK11AQ9UQ88 783 aaPredicted RBP24.99■■□□□ 1.59
CTNS-209ENST00000574776 CFAP74Q9C0B2 1584 aa24.98■■□□□ 1.59
CTNS-209ENST00000574776 PTPRMP28827 1452 aa24.97■■□□□ 1.59
CTNS-209ENST00000574776 PLCH2O75038 1416 aa24.97■■□□□ 1.59
CTNS-209ENST00000574776 HECW1Q76N89 1606 aa24.97■■□□□ 1.59
CTNS-209ENST00000574776 ILDR1Q86SU0 546 aaPredicted RBP24.95■■□□□ 1.58
CTNS-209ENST00000574776 BCORL1Q5H9F3 1711 aa24.94■■□□□ 1.58
CTNS-209ENST00000574776 SCAPERQ9BY12 1400 aa24.93■■□□□ 1.58
CTNS-209ENST00000574776 EFCAB2Q5VUJ9 269 aa24.92■■□□□ 1.58
CTNS-209ENST00000574776 ARHGEF40Q8TER5 1519 aa24.91■■□□□ 1.58
CTNS-209ENST00000574776 YEATS2Q9ULM3 1422 aa24.89■■□□□ 1.58
CTNS-209ENST00000574776 MADDQ8WXG6 1647 aa24.89■■□□□ 1.57
CTNS-209ENST00000574776 TROQ12816 1431 aaPredicted RBP24.87■■□□□ 1.57
CTNS-209ENST00000574776 ZMYM4Q5VZL5 1548 aa24.87■■□□□ 1.57
CTNS-209ENST00000574776 ZFYVE16Q7Z3T8 1539 aa24.86■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms