RNA–Protein interactions for RNA: ENST00000574294.5

TVP23B-207, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

TSL 5

Gene TVP23B, Length 1,049 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-207ENST00000574294 RUSC2Q8N2Y8 1516 aa28.26■■■□□ 2.11
TVP23B-207ENST00000574294 ERCC6L2Q5T890 1561 aa28.24■■■□□ 2.11
TVP23B-207ENST00000574294 CARMIL1Q5VZK9 1371 aa28.24■■■□□ 2.11
TVP23B-207ENST00000574294 PRG4Q92954 1404 aaPredicted RBP28.22■■■□□ 2.11
TVP23B-207ENST00000574294 KIAA0586Q9BVV6 1533 aa28.22■■■□□ 2.11
TVP23B-207ENST00000574294 TRHP20396 242 aaPredicted RBP28.2■■■□□ 2.1
TVP23B-207ENST00000574294 RAPGEF2Q9Y4G8 1499 aa28.03■■■□□ 2.08
TVP23B-207ENST00000574294 IQGAP2Q13576 1575 aa27.99■■■□□ 2.07
TVP23B-207ENST00000574294 CARMIL2Q6F5E8 1435 aa27.96■■■□□ 2.07
TVP23B-207ENST00000574294 NPM1P06748 294 aaKnown RBP eCLIP27.9■■■□□ 2.06
TVP23B-207ENST00000574294 PTPRGP23470 1445 aa27.86■■■□□ 2.05
TVP23B-207ENST00000574294 TNIKQ9UKE5 1360 aa27.86■■■□□ 2.05
TVP23B-207ENST00000574294 PRXQ9BXM0 1461 aa27.83■■■□□ 2.04
TVP23B-207ENST00000574294 UGGT2Q9NYU1 1516 aa27.82■■■□□ 2.04
TVP23B-207ENST00000574294 ADCY10Q96PN6 1610 aa27.82■■■□□ 2.04
TVP23B-207ENST00000574294 MAPKBP1O60336 1514 aa27.79■■■□□ 2.04
TVP23B-207ENST00000574294 CTTNBP2Q8WZ74 1663 aa27.78■■■□□ 2.04
TVP23B-207ENST00000574294 DISP1Q96F81 1524 aa27.77■■■□□ 2.04
TVP23B-207ENST00000574294 EEA1Q15075 1411 aa27.76■■■□□ 2.04
TVP23B-207ENST00000574294 CSRNP3Q8WYN3 585 aa27.72■■■□□ 2.03
TVP23B-207ENST00000574294 KIF13AQ9H1H9 1805 aa27.71■■■□□ 2.03
TVP23B-207ENST00000574294 UHRF1BP1LA0JNW5 1464 aa27.7■■■□□ 2.02
TVP23B-207ENST00000574294 GOLGA3Q08378 1498 aa27.7■■■□□ 2.02
TVP23B-207ENST00000574294 KIAA0556O60303 1618 aa27.69■■■□□ 2.02
TVP23B-207ENST00000574294 ABCC10Q5T3U5 1492 aa27.69■■■□□ 2.02
TVP23B-207ENST00000574294 ABCC2Q92887 1545 aa27.67■■■□□ 2.02
TVP23B-207ENST00000574294 UACAQ9BZF9 1416 aa27.66■■■□□ 2.02
TVP23B-207ENST00000574294 TTBK1Q5TCY1 1321 aaPredicted RBP27.66■■■□□ 2.02
TVP23B-207ENST00000574294 FAM69CQ0P6D2 419 aa27.62■■■□□ 2.01
TVP23B-207ENST00000574294 DIP2BQ9P265 1576 aa27.6■■■□□ 2.01
TVP23B-207ENST00000574294 FAM9AQ8IZU1 332 aaPredicted RBP27.56■■■□□ 2
TVP23B-207ENST00000574294 PLB1Q6P1J6 1458 aa27.56■■■□□ 2
TVP23B-207ENST00000574294 KDM5BQ9UGL1 1544 aa27.54■■■□□ 2
TVP23B-207ENST00000574294 ASXL2Q76L83 1435 aa27.5■■□□□ 1.99
TVP23B-207ENST00000574294 KIF21BO75037 1637 aa27.44■■□□□ 1.98
TVP23B-207ENST00000574294 ZCCHC11Q5TAX3 1644 aaKnown RBP27.44■■□□□ 1.98
TVP23B-207ENST00000574294 GLI2P10070 1586 aa27.43■■□□□ 1.98
TVP23B-207ENST00000574294 ABCA8O94911 1581 aa27.42■■□□□ 1.98
TVP23B-207ENST00000574294 SAMD9Q5K651 1589 aa27.39■■□□□ 1.98
TVP23B-207ENST00000574294 TSPOAP1O95153 1857 aa27.36■■□□□ 1.97
TVP23B-207ENST00000574294 EPRSP07814 1512 aaKnown RBP27.34■■□□□ 1.97
TVP23B-207ENST00000574294 WDR7Q9Y4E6 1490 aa27.32■■□□□ 1.96
TVP23B-207ENST00000574294 P3H3Q8IVL6 736 aa27.3■■□□□ 1.96
TVP23B-207ENST00000574294 KDM6BO15054 1643 aa27.28■■□□□ 1.96
TVP23B-207ENST00000574294 MAP3K4Q9Y6R4 1608 aa27.26■■□□□ 1.95
TVP23B-207ENST00000574294 EFCAB5A4FU69 1503 aa27.26■■□□□ 1.95
TVP23B-207ENST00000574294 TEX14Q8IWB6 1497 aa27.24■■□□□ 1.95
TVP23B-207ENST00000574294 PPRC1Q5VV67 1664 aaKnown RBP27.22■■□□□ 1.95
TVP23B-207ENST00000574294 RAPGEF6Q8TEU7 1601 aa27.21■■□□□ 1.95
TVP23B-207ENST00000574294 UBTFP17480 764 aaKnown RBP27.19■■□□□ 1.94
TVP23B-207ENST00000574294 ATP10BO94823 1461 aa27.19■■□□□ 1.94
TVP23B-207ENST00000574294 RANGAP1P46060 587 aaPredicted RBP27.17■■□□□ 1.94
TVP23B-207ENST00000574294 CFAP43Q8NDM7 1665 aa27.17■■□□□ 1.94
TVP23B-207ENST00000574294 FHOD3Q2V2M9 1422 aa27.16■■□□□ 1.94
TVP23B-207ENST00000574294 KCNH8Q96L42 1107 aa27.13■■□□□ 1.93
TVP23B-207ENST00000574294 CD109Q6YHK3 1445 aa27.11■■□□□ 1.93
TVP23B-207ENST00000574294 MAGI3Q5TCQ9 1506 aa27.11■■□□□ 1.93
TVP23B-207ENST00000574294 NUP153P49790 1475 aaKnown RBP27.08■■□□□ 1.93
TVP23B-207ENST00000574294 ARID3CA6NKF2 412 aa27.06■■□□□ 1.92
TVP23B-207ENST00000574294 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.05■■□□□ 1.92
TVP23B-207ENST00000574294 HNRNPUL2Q1KMD3 747 aaKnown RBP27.05■■□□□ 1.92
TVP23B-207ENST00000574294 FMN1Q68DA7 1419 aa27.02■■□□□ 1.92
TVP23B-207ENST00000574294 EHMT2Q96KQ7 1210 aa27.01■■□□□ 1.91
TVP23B-207ENST00000574294 ABCA9Q8IUA7 1624 aa27.01■■□□□ 1.91
TVP23B-207ENST00000574294 PLEKHD1A6NEE1 506 aa26.98■■□□□ 1.91
TVP23B-207ENST00000574294 COL17A1Q9UMD9 1497 aaPredicted RBP26.98■■□□□ 1.91
TVP23B-207ENST00000574294 PHLDB1Q86UU1 1377 aa26.97■■□□□ 1.91
TVP23B-207ENST00000574294 ARHGAP35Q9NRY4 1499 aa26.97■■□□□ 1.91
TVP23B-207ENST00000574294 HECW1Q76N89 1606 aa26.9■■□□□ 1.9
TVP23B-207ENST00000574294 ARAP3Q8WWN8 1544 aa26.9■■□□□ 1.9
TVP23B-207ENST00000574294 NEO1Q92859 1461 aa26.87■■□□□ 1.89
TVP23B-207ENST00000574294 CDK11AQ9UQ88 783 aaPredicted RBP26.85■■□□□ 1.89
TVP23B-207ENST00000574294 CDK13Q14004 1512 aaKnown RBP26.81■■□□□ 1.88
TVP23B-207ENST00000574294 ATP1B4Q9UN42 357 aaPredicted RBP26.8■■□□□ 1.88
TVP23B-207ENST00000574294 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP26.77■■□□□ 1.88
TVP23B-207ENST00000574294 KDM4FA0A1W2PPD8 638 aa26.77■■□□□ 1.88
TVP23B-207ENST00000574294 CFAP74Q9C0B2 1584 aa26.76■■□□□ 1.87
TVP23B-207ENST00000574294 CLIP1P30622 1438 aa26.73■■□□□ 1.87
TVP23B-207ENST00000574294 CASKIN1Q8WXD9 1431 aa26.73■■□□□ 1.87
TVP23B-207ENST00000574294 TTC37Q6PGP7 1564 aa26.71■■□□□ 1.87
TVP23B-207ENST00000574294 FANCAO15360 1455 aa26.7■■□□□ 1.87
TVP23B-207ENST00000574294 CCDC18Q5T9S5 1454 aa26.7■■□□□ 1.87
TVP23B-207ENST00000574294 ADGRL1O94910 1474 aa26.69■■□□□ 1.86
TVP23B-207ENST00000574294 TROQ12816 1431 aaPredicted RBP26.67■■□□□ 1.86
TVP23B-207ENST00000574294 AKNAQ7Z591 1439 aa26.67■■□□□ 1.86
TVP23B-207ENST00000574294 FYCO1Q9BQS8 1478 aa26.66■■□□□ 1.86
TVP23B-207ENST00000574294 PLCH2O75038 1416 aa26.65■■□□□ 1.86
TVP23B-207ENST00000574294 KIF14Q15058 1648 aa26.65■■□□□ 1.86
TVP23B-207ENST00000574294 PCF11O94913 1555 aaKnown RBP26.65■■□□□ 1.86
TVP23B-207ENST00000574294 DENND4BO75064 1496 aaPredicted RBP26.64■■□□□ 1.86
TVP23B-207ENST00000574294 RAPGEF3O95398 923 aa26.64■■□□□ 1.86
TVP23B-207ENST00000574294 LRRIQ1Q96JM4 1722 aa26.63■■□□□ 1.85
TVP23B-207ENST00000574294 MYO5CQ9NQX4 1742 aa26.62■■□□□ 1.85
TVP23B-207ENST00000574294 FRMPD1Q5SYB0 1578 aa26.58■■□□□ 1.85
TVP23B-207ENST00000574294 EFCAB2Q5VUJ9 269 aa26.58■■□□□ 1.85
TVP23B-207ENST00000574294 RICTORQ6R327 1708 aa26.57■■□□□ 1.84
TVP23B-207ENST00000574294 ZMYM4Q5VZL5 1548 aa26.52■■□□□ 1.84
TVP23B-207ENST00000574294 MAGI2Q86UL8 1455 aa26.52■■□□□ 1.84
TVP23B-207ENST00000574294 SCAPERQ9BY12 1400 aa26.5■■□□□ 1.83
TVP23B-207ENST00000574294 ARHGEF40Q8TER5 1519 aa26.49■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 103.3 ms