RNA–Protein interactions for RNA: ENST00000573681.1

PRPF8-207, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 2

Gene PRPF8, Length 1,044 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-207ENST00000573681 PCGF6Q9BYE7 350 aa20.02■□□□□ 0.8
PRPF8-207ENST00000573681 SNAPC4Q5SXM2 1469 aa20.02■□□□□ 0.8
PRPF8-207ENST00000573681 ARAP1Q96P48 1450 aa20.01■□□□□ 0.79
PRPF8-207ENST00000573681 CHMP7Q8WUX9 453 aaPredicted RBP20.01■□□□□ 0.79
PRPF8-207ENST00000573681 SYNJ2O15056 1496 aa19.96■□□□□ 0.79
PRPF8-207ENST00000573681 EFCAB5A4FU69 1503 aa19.96■□□□□ 0.79
PRPF8-207ENST00000573681 PPARGC1BQ86YN6 1023 aaKnown RBP19.95■□□□□ 0.78
PRPF8-207ENST00000573681 GRIN2AQ12879 1464 aa19.93■□□□□ 0.78
PRPF8-207ENST00000573681 CTTNBP2Q8WZ74 1663 aa19.93■□□□□ 0.78
PRPF8-207ENST00000573681 FBLN2P98095 1184 aa19.91■□□□□ 0.78
PRPF8-207ENST00000573681 P3H3Q8IVL6 736 aa19.91■□□□□ 0.78
PRPF8-207ENST00000573681 KIAA0586Q9BVV6 1533 aa19.91■□□□□ 0.78
PRPF8-207ENST00000573681 FMN1Q68DA7 1419 aa19.85■□□□□ 0.77
PRPF8-207ENST00000573681 IQGAP2Q13576 1575 aa19.84■□□□□ 0.77
PRPF8-207ENST00000573681 FHOD3Q2V2M9 1422 aa19.83■□□□□ 0.76
PRPF8-207ENST00000573681 NUP160Q12769 1436 aa19.81■□□□□ 0.76
PRPF8-207ENST00000573681 SAMD9Q5K651 1589 aa19.81■□□□□ 0.76
PRPF8-207ENST00000573681 UGGT2Q9NYU1 1516 aa19.81■□□□□ 0.76
PRPF8-207ENST00000573681 MAP3K1Q13233 1512 aa19.79■□□□□ 0.76
PRPF8-207ENST00000573681 CASKIN1Q8WXD9 1431 aa19.78■□□□□ 0.76
PRPF8-207ENST00000573681 JPH4Q96JJ6 628 aa19.77■□□□□ 0.76
PRPF8-207ENST00000573681 TTBK1Q5TCY1 1321 aaPredicted RBP19.75■□□□□ 0.75
PRPF8-207ENST00000573681 ATP1B4Q9UN42 357 aaPredicted RBP19.74■□□□□ 0.75
PRPF8-207ENST00000573681 KANK4Q5T7N3 995 aaPredicted RBP19.73■□□□□ 0.75
PRPF8-207ENST00000573681 CEP170Q5SW79 1584 aa19.73■□□□□ 0.75
PRPF8-207ENST00000573681 FYCO1Q9BQS8 1478 aa19.73■□□□□ 0.75
PRPF8-207ENST00000573681 CARMIL2Q6F5E8 1435 aa19.7■□□□□ 0.74
PRPF8-207ENST00000573681 DISP1Q96F81 1524 aa19.67■□□□□ 0.74
PRPF8-207ENST00000573681 TIAM1Q13009 1591 aa19.65■□□□□ 0.74
PRPF8-207ENST00000573681 PCF11O94913 1555 aaKnown RBP19.64■□□□□ 0.73
PRPF8-207ENST00000573681 LRRC9Q6ZRR7 1453 aa19.62■□□□□ 0.73
PRPF8-207ENST00000573681 KIAA0556O60303 1618 aa19.62■□□□□ 0.73
PRPF8-207ENST00000573681 CCDC18Q5T9S5 1454 aa19.56■□□□□ 0.72
PRPF8-207ENST00000573681 PRG4Q92954 1404 aaPredicted RBP19.56■□□□□ 0.72
PRPF8-207ENST00000573681 CHD1O14646 1710 aa19.55■□□□□ 0.72
PRPF8-207ENST00000573681 CFAP43Q8NDM7 1665 aa19.52■□□□□ 0.72
PRPF8-207ENST00000573681 MTUS2Q5JR59 1369 aa19.52■□□□□ 0.72
PRPF8-207ENST00000573681 HECW1Q76N89 1606 aa19.51■□□□□ 0.71
PRPF8-207ENST00000573681 CDK11AQ9UQ88 783 aaPredicted RBP19.51■□□□□ 0.71
PRPF8-207ENST00000573681 RRBP1Q9P2E9 1410 aaKnown RBP19.51■□□□□ 0.71
PRPF8-207ENST00000573681 PTPRGP23470 1445 aa19.5■□□□□ 0.71
PRPF8-207ENST00000573681 EPRSP07814 1512 aaKnown RBP19.49■□□□□ 0.71
PRPF8-207ENST00000573681 CCNB3Q8WWL7 1395 aa19.46■□□□□ 0.71
PRPF8-207ENST00000573681 HRCP23327 699 aa19.46■□□□□ 0.71
PRPF8-207ENST00000573681 SHROOM2Q13796 1616 aa19.45■□□□□ 0.7
PRPF8-207ENST00000573681 OSCARQ8IYS5 282 aa19.45■□□□□ 0.7
PRPF8-207ENST00000573681 CLASP1Q7Z460 1538 aa19.45■□□□□ 0.7
PRPF8-207ENST00000573681 RAPGEF6Q8TEU7 1601 aa19.44■□□□□ 0.7
PRPF8-207ENST00000573681 NUP153P49790 1475 aaKnown RBP19.43■□□□□ 0.7
PRPF8-207ENST00000573681 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.43■□□□□ 0.7
PRPF8-207ENST00000573681 HNRNPUL2Q1KMD3 747 aaKnown RBP19.43■□□□□ 0.7
PRPF8-207ENST00000573681 PHLDB1Q86UU1 1377 aa19.42■□□□□ 0.7
PRPF8-207ENST00000573681 PLB1Q6P1J6 1458 aa19.41■□□□□ 0.7
PRPF8-207ENST00000573681 EHBP1L1Q8N3D4 1523 aa19.41■□□□□ 0.7
PRPF8-207ENST00000573681 ZEB1P37275 1124 aaPredicted RBP19.39■□□□□ 0.69
PRPF8-207ENST00000573681 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.39■□□□□ 0.69
PRPF8-207ENST00000573681 ARID3CA6NKF2 412 aa19.38■□□□□ 0.69
PRPF8-207ENST00000573681 ABCA8O94911 1581 aa19.38■□□□□ 0.69
PRPF8-207ENST00000573681 NCOA2Q15596 1464 aa19.36■□□□□ 0.69
PRPF8-207ENST00000573681 PLEKHD1A6NEE1 506 aa19.36■□□□□ 0.69
PRPF8-207ENST00000573681 LRRIQ1Q96JM4 1722 aa19.36■□□□□ 0.69
PRPF8-207ENST00000573681 CDK13Q14004 1512 aaKnown RBP19.35■□□□□ 0.69
PRPF8-207ENST00000573681 UACAQ9BZF9 1416 aa19.35■□□□□ 0.69
PRPF8-207ENST00000573681 FAM50AQ14320 339 aaKnown RBP19.33■□□□□ 0.68
PRPF8-207ENST00000573681 MAGI3Q5TCQ9 1506 aa19.32■□□□□ 0.68
PRPF8-207ENST00000573681 SUPT6HQ7KZ85 1726 aaKnown RBP19.32■□□□□ 0.68
PRPF8-207ENST00000573681 ATP10BO94823 1461 aa19.32■□□□□ 0.68
PRPF8-207ENST00000573681 MYOM3Q5VTT5 1437 aa19.32■□□□□ 0.68
PRPF8-207ENST00000573681 ARHGEF11O15085 1522 aa19.31■□□□□ 0.68
PRPF8-207ENST00000573681 TROQ12816 1431 aaPredicted RBP19.31■□□□□ 0.68
PRPF8-207ENST00000573681 FGD6Q6ZV73 1430 aa19.3■□□□□ 0.68
PRPF8-207ENST00000573681 CCER1Q8TC90 406 aaPredicted RBP19.29■□□□□ 0.68
PRPF8-207ENST00000573681 ERCC6L2Q5T890 1561 aa19.27■□□□□ 0.67
PRPF8-207ENST00000573681 MIA2Q96PC5 1412 aa19.26■□□□□ 0.67
PRPF8-207ENST00000573681 ITGAEP38570 1179 aa19.26■□□□□ 0.67
PRPF8-207ENST00000573681 UHRF1BP1LA0JNW5 1464 aa19.24■□□□□ 0.67
PRPF8-207ENST00000573681 ABCC2Q92887 1545 aa19.22■□□□□ 0.67
PRPF8-207ENST00000573681 TCOF1Q13428 1488 aaKnown RBP19.18■□□□□ 0.66
PRPF8-207ENST00000573681 CFDP1Q9UEE9 299 aaPredicted RBP19.16■□□□□ 0.66
PRPF8-207ENST00000573681 SETD5Q9C0A6 1442 aa19.15■□□□□ 0.66
PRPF8-207ENST00000573681 KDM5BQ9UGL1 1544 aa19.14■□□□□ 0.65
PRPF8-207ENST00000573681 ADCY10Q96PN6 1610 aa19.14■□□□□ 0.65
PRPF8-207ENST00000573681 PTPN23Q9H3S7 1636 aa19.14■□□□□ 0.65
PRPF8-207ENST00000573681 GPATCH8Q9UKJ3 1502 aaKnown RBP19.12■□□□□ 0.65
PRPF8-207ENST00000573681 ABCC10Q5T3U5 1492 aa19.1■□□□□ 0.65
PRPF8-207ENST00000573681 NPM1P06748 294 aaKnown RBP eCLIP19.09■□□□□ 0.65
PRPF8-207ENST00000573681 KIF14Q15058 1648 aa19.09■□□□□ 0.65
PRPF8-207ENST00000573681 CLSPNQ9HAW4 1339 aa19.08■□□□□ 0.65
PRPF8-207ENST00000573681 RAB3GAP2Q9H2M9 1393 aa19.06■□□□□ 0.64
PRPF8-207ENST00000573681 PTPRKQ15262 1439 aa19.06■□□□□ 0.64
PRPF8-207ENST00000573681 ACIN1Q9UKV3 1341 aaKnown RBP19.05■□□□□ 0.64
PRPF8-207ENST00000573681 ZNF644Q9H582 1327 aaPredicted RBP19.04■□□□□ 0.64
PRPF8-207ENST00000573681 KCNH8Q96L42 1107 aa19.04■□□□□ 0.64
PRPF8-207ENST00000573681 ZNF777Q9ULD5 760 aaPredicted RBP19.03■□□□□ 0.64
PRPF8-207ENST00000573681 ITSN2Q9NZM3 1697 aa19.02■□□□□ 0.64
PRPF8-207ENST00000573681 HFM1A2PYH4 1435 aa19.02■□□□□ 0.64
PRPF8-207ENST00000573681 RSPH4AQ5TD94 716 aa19.02■□□□□ 0.64
PRPF8-207ENST00000573681 DHX57Q6P158 1386 aaKnown RBP19.02■□□□□ 0.64
PRPF8-207ENST00000573681 ZCCHC11Q5TAX3 1644 aaKnown RBP19■□□□□ 0.63
PRPF8-207ENST00000573681 ROCK1Q13464 1354 aa19■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms