RNA–Protein interactions for RNA: ENST00000573577.5

RPAIN-213, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,282 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-213ENST00000573577 CARMIL1Q5VZK9 1371 aa22.88■■□□□ 1.25
RPAIN-213ENST00000573577 SHROOM2Q13796 1616 aa22.86■■□□□ 1.25
RPAIN-213ENST00000573577 RUSC2Q8N2Y8 1516 aa22.85■■□□□ 1.25
RPAIN-213ENST00000573577 ERCC6L2Q5T890 1561 aa22.8■■□□□ 1.24
RPAIN-213ENST00000573577 KIAA0586Q9BVV6 1533 aa22.78■■□□□ 1.24
RPAIN-213ENST00000573577 JPH4Q96JJ6 628 aa22.76■■□□□ 1.23
RPAIN-213ENST00000573577 PRG4Q92954 1404 aaPredicted RBP22.75■■□□□ 1.23
RPAIN-213ENST00000573577 RAPGEF2Q9Y4G8 1499 aa22.74■■□□□ 1.23
RPAIN-213ENST00000573577 PRXQ9BXM0 1461 aa22.64■■□□□ 1.21
RPAIN-213ENST00000573577 IQGAP2Q13576 1575 aa22.63■■□□□ 1.21
RPAIN-213ENST00000573577 EEA1Q15075 1411 aa22.6■■□□□ 1.21
RPAIN-213ENST00000573577 CSRNP3Q8WYN3 585 aa22.57■■□□□ 1.2
RPAIN-213ENST00000573577 CARMIL2Q6F5E8 1435 aa22.54■■□□□ 1.2
RPAIN-213ENST00000573577 UGGT2Q9NYU1 1516 aa22.52■■□□□ 1.19
RPAIN-213ENST00000573577 CTTNBP2Q8WZ74 1663 aa22.51■■□□□ 1.19
RPAIN-213ENST00000573577 DISP1Q96F81 1524 aa22.49■■□□□ 1.19
RPAIN-213ENST00000573577 TRHP20396 242 aaPredicted RBP22.48■■□□□ 1.19
RPAIN-213ENST00000573577 TNIKQ9UKE5 1360 aa22.48■■□□□ 1.19
RPAIN-213ENST00000573577 FAM9AQ8IZU1 332 aaPredicted RBP22.47■■□□□ 1.19
RPAIN-213ENST00000573577 PTPRGP23470 1445 aa22.46■■□□□ 1.19
RPAIN-213ENST00000573577 KIAA0556O60303 1618 aa22.42■■□□□ 1.18
RPAIN-213ENST00000573577 ADCY10Q96PN6 1610 aa22.42■■□□□ 1.18
RPAIN-213ENST00000573577 TTBK1Q5TCY1 1321 aaPredicted RBP22.4■■□□□ 1.18
RPAIN-213ENST00000573577 GOLGA3Q08378 1498 aa22.38■■□□□ 1.17
RPAIN-213ENST00000573577 KIF21BO75037 1637 aa22.37■■□□□ 1.17
RPAIN-213ENST00000573577 NPM1P06748 294 aaKnown RBP eCLIP22.35■■□□□ 1.17
RPAIN-213ENST00000573577 UHRF1BP1LA0JNW5 1464 aa22.31■■□□□ 1.16
RPAIN-213ENST00000573577 MAPKBP1O60336 1514 aa22.31■■□□□ 1.16
RPAIN-213ENST00000573577 UACAQ9BZF9 1416 aa22.31■■□□□ 1.16
RPAIN-213ENST00000573577 ABCC2Q92887 1545 aa22.29■■□□□ 1.16
RPAIN-213ENST00000573577 PLPPR3Q6T4P5 718 aa22.25■■□□□ 1.15
RPAIN-213ENST00000573577 SAMD9Q5K651 1589 aa22.24■■□□□ 1.15
RPAIN-213ENST00000573577 ABCC10Q5T3U5 1492 aa22.22■■□□□ 1.15
RPAIN-213ENST00000573577 PLB1Q6P1J6 1458 aa22.22■■□□□ 1.15
RPAIN-213ENST00000573577 FOXD1Q16676 465 aa22.2■■□□□ 1.14
RPAIN-213ENST00000573577 KDM5BQ9UGL1 1544 aa22.2■■□□□ 1.14
RPAIN-213ENST00000573577 P3H3Q8IVL6 736 aa22.19■■□□□ 1.14
RPAIN-213ENST00000573577 KIF13AQ9H1H9 1805 aa22.19■■□□□ 1.14
RPAIN-213ENST00000573577 ABCA8O94911 1581 aa22.18■■□□□ 1.14
RPAIN-213ENST00000573577 EHMT2Q96KQ7 1210 aa22.18■■□□□ 1.14
RPAIN-213ENST00000573577 DIP2BQ9P265 1576 aa22.17■■□□□ 1.14
RPAIN-213ENST00000573577 UBTFP17480 764 aaKnown RBP22.16■■□□□ 1.14
RPAIN-213ENST00000573577 RANGAP1P46060 587 aaPredicted RBP22.16■■□□□ 1.14
RPAIN-213ENST00000573577 FAM69CQ0P6D2 419 aa22.16■■□□□ 1.14
RPAIN-213ENST00000573577 ASXL2Q76L83 1435 aa22.15■■□□□ 1.14
RPAIN-213ENST00000573577 ZCCHC11Q5TAX3 1644 aaKnown RBP22.13■■□□□ 1.13
RPAIN-213ENST00000573577 EFCAB5A4FU69 1503 aa22.13■■□□□ 1.13
RPAIN-213ENST00000573577 FHOD3Q2V2M9 1422 aa22.1■■□□□ 1.13
RPAIN-213ENST00000573577 RAPGEF6Q8TEU7 1601 aa22.04■■□□□ 1.12
RPAIN-213ENST00000573577 GLI2P10070 1586 aa22.04■■□□□ 1.12
RPAIN-213ENST00000573577 WDR7Q9Y4E6 1490 aa22.03■■□□□ 1.12
RPAIN-213ENST00000573577 EPRSP07814 1512 aaKnown RBP22.02■■□□□ 1.12
RPAIN-213ENST00000573577 ATP10BO94823 1461 aa21.99■■□□□ 1.11
RPAIN-213ENST00000573577 ARHGAP35Q9NRY4 1499 aa21.99■■□□□ 1.11
RPAIN-213ENST00000573577 ARID3CA6NKF2 412 aa21.98■■□□□ 1.11
RPAIN-213ENST00000573577 NUP153P49790 1475 aaKnown RBP21.97■■□□□ 1.11
RPAIN-213ENST00000573577 TSPOAP1O95153 1857 aa21.94■■□□□ 1.1
RPAIN-213ENST00000573577 MAP3K4Q9Y6R4 1608 aa21.92■■□□□ 1.1
RPAIN-213ENST00000573577 FMN1Q68DA7 1419 aa21.92■■□□□ 1.1
RPAIN-213ENST00000573577 PPRC1Q5VV67 1664 aaKnown RBP21.89■■□□□ 1.1
RPAIN-213ENST00000573577 KCNH8Q96L42 1107 aa21.89■■□□□ 1.09
RPAIN-213ENST00000573577 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.88■■□□□ 1.09
RPAIN-213ENST00000573577 HNRNPUL2Q1KMD3 747 aaKnown RBP21.88■■□□□ 1.09
RPAIN-213ENST00000573577 KDM6BO15054 1643 aa21.84■■□□□ 1.09
RPAIN-213ENST00000573577 TEX14Q8IWB6 1497 aa21.84■■□□□ 1.09
RPAIN-213ENST00000573577 CFAP43Q8NDM7 1665 aa21.84■■□□□ 1.09
RPAIN-213ENST00000573577 CLIP1P30622 1438 aa21.83■■□□□ 1.09
RPAIN-213ENST00000573577 HECW1Q76N89 1606 aa21.83■■□□□ 1.08
RPAIN-213ENST00000573577 CD109Q6YHK3 1445 aa21.82■■□□□ 1.08
RPAIN-213ENST00000573577 CDK13Q14004 1512 aaKnown RBP21.8■■□□□ 1.08
RPAIN-213ENST00000573577 MAGI3Q5TCQ9 1506 aa21.8■■□□□ 1.08
RPAIN-213ENST00000573577 ABCA9Q8IUA7 1624 aa21.78■■□□□ 1.08
RPAIN-213ENST00000573577 LOC105371045A0A1W2PR82 267 aa21.78■■□□□ 1.08
RPAIN-213ENST00000573577 PLEKHD1A6NEE1 506 aa21.78■■□□□ 1.08
RPAIN-213ENST00000573577 ATP1B4Q9UN42 357 aaPredicted RBP21.78■■□□□ 1.08
RPAIN-213ENST00000573577 PCF11O94913 1555 aaKnown RBP21.74■■□□□ 1.07
RPAIN-213ENST00000573577 CASKIN1Q8WXD9 1431 aa21.73■■□□□ 1.07
RPAIN-213ENST00000573577 CEP162Q5TB80 1403 aa21.72■■□□□ 1.07
RPAIN-213ENST00000573577 COL17A1Q9UMD9 1497 aaPredicted RBP21.71■■□□□ 1.07
RPAIN-213ENST00000573577 FYCO1Q9BQS8 1478 aa21.69■■□□□ 1.06
RPAIN-213ENST00000573577 CDK11AQ9UQ88 783 aaPredicted RBP21.68■■□□□ 1.06
RPAIN-213ENST00000573577 LRRIQ1Q96JM4 1722 aa21.67■■□□□ 1.06
RPAIN-213ENST00000573577 CCDC18Q5T9S5 1454 aa21.67■■□□□ 1.06
RPAIN-213ENST00000573577 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.66■■□□□ 1.06
RPAIN-213ENST00000573577 TTC37Q6PGP7 1564 aa21.64■■□□□ 1.05
RPAIN-213ENST00000573577 TROQ12816 1431 aaPredicted RBP21.63■■□□□ 1.05
RPAIN-213ENST00000573577 PHLDB1Q86UU1 1377 aa21.62■■□□□ 1.05
RPAIN-213ENST00000573577 NEO1Q92859 1461 aa21.62■■□□□ 1.05
RPAIN-213ENST00000573577 ARAP3Q8WWN8 1544 aa21.61■■□□□ 1.05
RPAIN-213ENST00000573577 KIF14Q15058 1648 aa21.59■■□□□ 1.05
RPAIN-213ENST00000573577 FANCAO15360 1455 aa21.56■■□□□ 1.04
RPAIN-213ENST00000573577 CFAP74Q9C0B2 1584 aa21.55■■□□□ 1.04
RPAIN-213ENST00000573577 PLCH2O75038 1416 aa21.54■■□□□ 1.04
RPAIN-213ENST00000573577 AKNAQ7Z591 1439 aa21.52■■□□□ 1.04
RPAIN-213ENST00000573577 MYO5CQ9NQX4 1742 aa21.5■■□□□ 1.03
RPAIN-213ENST00000573577 RAPGEF3O95398 923 aa21.48■■□□□ 1.03
RPAIN-213ENST00000573577 FRMPD1Q5SYB0 1578 aa21.47■■□□□ 1.03
RPAIN-213ENST00000573577 DENND4BO75064 1496 aaPredicted RBP21.46■■□□□ 1.03
RPAIN-213ENST00000573577 VPS8Q8N3P4 1428 aa21.46■■□□□ 1.03
RPAIN-213ENST00000573577 EFCAB2Q5VUJ9 269 aa21.45■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms